RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 TFIP11Q9UBB9 837 aaKnown RBP8.9□□□□□ -0.98
HMGB3P6-201ENST00000444896 CHIC2Q9UKJ5 165 aa8.9□□□□□ -0.98
HMGB3P6-201ENST00000444896 GDF9O60383 454 aa8.89□□□□□ -0.99
HMGB3P6-201ENST00000444896 GRM5P41594 1212 aa8.89□□□□□ -0.99
HMGB3P6-201ENST00000444896 CFAP70Q5T0N1 1121 aa8.89□□□□□ -0.99
HMGB3P6-201ENST00000444896 ZNF592Q92610 1267 aa8.89□□□□□ -0.99
HMGB3P6-201ENST00000444896 PDZRN3Q9UPQ7 1066 aa8.89□□□□□ -0.99
HMGB3P6-201ENST00000444896 MAP4K5Q9Y4K4 846 aa8.89□□□□□ -0.99
HMGB3P6-201ENST00000444896 TLL2Q9Y6L7 1015 aa8.89□□□□□ -0.99
HMGB3P6-201ENST00000444896 GFRA3O60609 400 aa8.88□□□□□ -0.99
HMGB3P6-201ENST00000444896 TRIM67Q6ZTA4 783 aa8.88□□□□□ -0.99
HMGB3P6-201ENST00000444896 KCTD15Q96SI1 283 aaPredicted RBP8.88□□□□□ -0.99
HMGB3P6-201ENST00000444896 CDV3Q9UKY7 258 aaKnown RBP8.88□□□□□ -0.99
HMGB3P6-201ENST00000444896 TNFRSF10AO00220 468 aa8.87□□□□□ -0.99
HMGB3P6-201ENST00000444896 ARID5BQ14865 1188 aa8.87□□□□□ -0.99
HMGB3P6-201ENST00000444896 VASH1Q7L8A9 365 aaPredicted RBP8.87□□□□□ -0.99
HMGB3P6-201ENST00000444896 NFATC2IPQ8NCF5 419 aa8.87□□□□□ -0.99
HMGB3P6-201ENST00000444896 CCDC85AQ96PX6 553 aaPredicted RBP8.87□□□□□ -0.99
HMGB3P6-201ENST00000444896 TTC24A2A3L6 582 aaPredicted RBP8.86□□□□□ -0.99
HMGB3P6-201ENST00000444896 ATP9BO43861 1147 aa8.86□□□□□ -0.99
HMGB3P6-201ENST00000444896 LAPTM4AQ15012 233 aa8.86□□□□□ -0.99
HMGB3P6-201ENST00000444896 SLFNL1Q499Z3 407 aa8.86□□□□□ -0.99
HMGB3P6-201ENST00000444896 RNF135Q8IUD6 432 aa8.86□□□□□ -0.99
HMGB3P6-201ENST00000444896 CYP4X1Q8N118 509 aa8.86□□□□□ -0.99
HMGB3P6-201ENST00000444896 SKIP12755 728 aa8.85□□□□□ -0.99
HMGB3P6-201ENST00000444896 SRPK2P78362 688 aaKnown RBP8.85□□□□□ -0.99
HMGB3P6-201ENST00000444896 NBPF20Q3BBV1 942 aa8.85□□□□□ -0.99
HMGB3P6-201ENST00000444896 INTS6LQ5JSJ4 861 aaKnown RBP8.85□□□□□ -0.99
HMGB3P6-201ENST00000444896 TRAF7Q6Q0C0 670 aa8.85□□□□□ -0.99
HMGB3P6-201ENST00000444896 MAFBQ9Y5Q3 323 aaPredicted RBP8.85□□□□□ -0.99
HMGB3P6-201ENST00000444896 RFX1P22670 979 aa8.84□□□□□ -0.99
HMGB3P6-201ENST00000444896 LMOD1P29536 600 aaPredicted RBP8.84□□□□□ -0.99
HMGB3P6-201ENST00000444896 PLPP7Q8NBV4 271 aa8.84□□□□□ -0.99
HMGB3P6-201ENST00000444896 ADH1CP00326 375 aa8.83□□□□□ -1
HMGB3P6-201ENST00000444896 RNF20Q5VTR2 975 aa8.83□□□□□ -1
HMGB3P6-201ENST00000444896 SEPT12Q8IYM1 358 aa8.83□□□□□ -1
HMGB3P6-201ENST00000444896 SNIP1Q8TAD8 396 aaKnown RBP8.83□□□□□ -1
HMGB3P6-201ENST00000444896 CDCA7Q9BWT1 371 aaPredicted RBP8.83□□□□□ -1
HMGB3P6-201ENST00000444896 TOR4AQ9NXH8 423 aa8.83□□□□□ -1
HMGB3P6-201ENST00000444896 USP17L5A8MUK1 530 aa8.82□□□□□ -1
HMGB3P6-201ENST00000444896 ERVH48-1M5A8F1 160 aa8.82□□□□□ -1
HMGB3P6-201ENST00000444896 DEPDC4Q8N2C3 294 aa8.82□□□□□ -1
HMGB3P6-201ENST00000444896 J3QL48 77 aa8.81□□□□□ -1
HMGB3P6-201ENST00000444896 ALDH1A1P00352 501 aa8.81□□□□□ -1
HMGB3P6-201ENST00000444896 NR3C2P08235 984 aa8.81□□□□□ -1
HMGB3P6-201ENST00000444896 FSHRP23945 695 aa8.81□□□□□ -1
HMGB3P6-201ENST00000444896 RAB15P59190 212 aa8.81□□□□□ -1
HMGB3P6-201ENST00000444896 PRR20EP86478 221 aa8.81□□□□□ -1
HMGB3P6-201ENST00000444896 PRR20CP86479 221 aa8.81□□□□□ -1
HMGB3P6-201ENST00000444896 PRR20DP86480 221 aa8.81□□□□□ -1
HMGB3P6-201ENST00000444896 PRR20BP86481 221 aa8.81□□□□□ -1
HMGB3P6-201ENST00000444896 PRR20AP86496 221 aa8.81□□□□□ -1
HMGB3P6-201ENST00000444896 NR5A1Q13285 461 aa8.81□□□□□ -1
HMGB3P6-201ENST00000444896 MAP7D1Q3KQU3 841 aa8.81□□□□□ -1
HMGB3P6-201ENST00000444896 PKDCCQ504Y2 493 aa8.81□□□□□ -1
HMGB3P6-201ENST00000444896 KANK4Q5T7N3 995 aaPredicted RBP8.81□□□□□ -1
HMGB3P6-201ENST00000444896 PLEKHM2Q8IWE5 1019 aa8.81□□□□□ -1
HMGB3P6-201ENST00000444896 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.8□□□□□ -1
HMGB3P6-201ENST00000444896 USP17L3A6NCW0 530 aa8.8□□□□□ -1
HMGB3P6-201ENST00000444896 USP17L4A6NCW7 530 aa8.8□□□□□ -1
HMGB3P6-201ENST00000444896 FAM187AA6NFU0 413 aa8.8□□□□□ -1
HMGB3P6-201ENST00000444896 NRG2O14511 850 aaPredicted RBP8.8□□□□□ -1
HMGB3P6-201ENST00000444896 NCOA4Q13772 614 aa8.8□□□□□ -1
HMGB3P6-201ENST00000444896 USP17L2Q6R6M4 530 aa8.8□□□□□ -1
HMGB3P6-201ENST00000444896 Q6ZNB5 142 aa8.8□□□□□ -1
HMGB3P6-201ENST00000444896 USP17L1Q7RTZ2 530 aa8.8□□□□□ -1
HMGB3P6-201ENST00000444896 TMPRSS4Q9NRS4 437 aa8.8□□□□□ -1
HMGB3P6-201ENST00000444896 CCDC125Q86Z20 511 aa8.79□□□□□ -1
HMGB3P6-201ENST00000444896 DOLKQ9UPQ8 538 aa8.79□□□□□ -1
HMGB3P6-201ENST00000444896 PCDHB11Q9Y5F2 797 aa8.79□□□□□ -1
HMGB3P6-201ENST00000444896 WASF2Q9Y6W5 498 aa8.79□□□□□ -1
HMGB3P6-201ENST00000444896 LZTS3O60299 673 aaPredicted RBP8.78□□□□□ -1
HMGB3P6-201ENST00000444896 SMPD1P17405 629 aa8.78□□□□□ -1
HMGB3P6-201ENST00000444896 CDCA8Q53HL2 280 aa8.78□□□□□ -1
HMGB3P6-201ENST00000444896 CCDC116Q8IYX3 515 aa8.78□□□□□ -1
HMGB3P6-201ENST00000444896 SCTRP47872 440 aa8.77□□□□□ -1.01
HMGB3P6-201ENST00000444896 NNTQ13423 1086 aa8.77□□□□□ -1.01
HMGB3P6-201ENST00000444896 PPP1R26Q5T8A7 1209 aaPredicted RBP8.77□□□□□ -1.01
HMGB3P6-201ENST00000444896 PBXIP1Q96AQ6 731 aa8.77□□□□□ -1.01
HMGB3P6-201ENST00000444896 KLF16Q9BXK1 252 aaPredicted RBP8.77□□□□□ -1.01
HMGB3P6-201ENST00000444896 MKRN1Q9UHC7 482 aaKnown RBP8.77□□□□□ -1.01
HMGB3P6-201ENST00000444896 LILRA1O75019 489 aa8.76□□□□□ -1.01
HMGB3P6-201ENST00000444896 EML3Q32P44 896 aa8.76□□□□□ -1.01
HMGB3P6-201ENST00000444896 OXLD1Q5BKU9 147 aa8.76□□□□□ -1.01
HMGB3P6-201ENST00000444896 VRTNQ9H8Y1 702 aa8.76□□□□□ -1.01
HMGB3P6-201ENST00000444896 PPP1R15AO75807 674 aaPredicted RBP8.75□□□□□ -1.01
HMGB3P6-201ENST00000444896 ERVK-9P63128 1117 aa8.75□□□□□ -1.01
HMGB3P6-201ENST00000444896 DHX9Q08211 1270 aaKnown RBP8.75□□□□□ -1.01
HMGB3P6-201ENST00000444896 ZNF784Q8NCA9 323 aaPredicted RBP8.75□□□□□ -1.01
HMGB3P6-201ENST00000444896 ADD1P35611 737 aaKnown RBP8.74□□□□□ -1.01
HMGB3P6-201ENST00000444896 USP4Q13107 963 aa8.74□□□□□ -1.01
HMGB3P6-201ENST00000444896 ZBTB7BO15156 539 aaPredicted RBP8.73□□□□□ -1.01
HMGB3P6-201ENST00000444896 CC2D2BQ6DHV5 1058 aa8.73□□□□□ -1.01
HMGB3P6-201ENST00000444896 HPS1Q92902 700 aa8.73□□□□□ -1.01
HMGB3P6-201ENST00000444896 CYLDQ9NQC7 956 aa8.73□□□□□ -1.01
HMGB3P6-201ENST00000444896 NOD1Q9Y239 953 aa8.73□□□□□ -1.01
HMGB3P6-201ENST00000444896 PCDHGA11Q9Y5H2 935 aa8.73□□□□□ -1.01
HMGB3P6-201ENST00000444896 EMILIN1Q9Y6C2 1016 aa8.73□□□□□ -1.01
HMGB3P6-201ENST00000444896 DGAT1O75907 488 aa8.72□□□□□ -1.01
HMGB3P6-201ENST00000444896 CLDN10P78369 228 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms