RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 PKP1Q13835 747 aa14.26□□□□□ -0.13
HCFC1-203ENST00000444191 CLCN1P35523 988 aa14.25□□□□□ -0.13
HCFC1-203ENST00000444191 AEBP1Q8IUX7 1158 aa14.25□□□□□ -0.13
HCFC1-203ENST00000444191 IL1RAPL2Q9NP60 686 aa14.25□□□□□ -0.13
HCFC1-203ENST00000444191 VAMP4O75379 141 aa14.25□□□□□ -0.13
HCFC1-203ENST00000444191 PTMSP20962 102 aa14.25□□□□□ -0.13
HCFC1-203ENST00000444191 AMPHP49418 695 aa14.24□□□□□ -0.13
HCFC1-203ENST00000444191 RABEP1Q15276 862 aa14.24□□□□□ -0.13
HCFC1-203ENST00000444191 DDX54Q8TDD1 881 aaKnown RBP14.24□□□□□ -0.13
HCFC1-203ENST00000444191 CROCC2H7BZ55 1655 aa14.24□□□□□ -0.13
HCFC1-203ENST00000444191 ARHGEF5Q12774 1597 aa14.24□□□□□ -0.13
HCFC1-203ENST00000444191 ZBTB7BO15156 539 aaPredicted RBP14.23□□□□□ -0.13
HCFC1-203ENST00000444191 CYB5RLQ6IPT4 315 aa14.23□□□□□ -0.13
HCFC1-203ENST00000444191 MEIS3Q99687 375 aa14.23□□□□□ -0.13
HCFC1-203ENST00000444191 POLKQ9UBT6 870 aa14.23□□□□□ -0.13
HCFC1-203ENST00000444191 CCDC9Q9Y3X0 531 aaKnown RBP14.23□□□□□ -0.13
HCFC1-203ENST00000444191 RRP9O43818 475 aaKnown RBP14.23□□□□□ -0.13
HCFC1-203ENST00000444191 NAP1L2Q9ULW6 460 aaPredicted RBP14.23□□□□□ -0.13
HCFC1-203ENST00000444191 CIZ1Q9ULV3 898 aaPredicted RBP14.22□□□□□ -0.13
HCFC1-203ENST00000444191 ANKRD36BQ8N2N9 1353 aa14.22□□□□□ -0.13
HCFC1-203ENST00000444191 ALDH1L2Q3SY69 923 aa14.22□□□□□ -0.13
HCFC1-203ENST00000444191 MRPL50Q8N5N7 158 aaKnown RBP14.22□□□□□ -0.13
HCFC1-203ENST00000444191 NGDNQ8NEJ9 315 aaKnown RBP14.22□□□□□ -0.13
HCFC1-203ENST00000444191 SDSP20132 328 aa14.22□□□□□ -0.13
HCFC1-203ENST00000444191 CCDC173Q0VFZ6 552 aa14.22□□□□□ -0.13
HCFC1-203ENST00000444191 RAB3GAP1Q15042 981 aa14.22□□□□□ -0.13
HCFC1-203ENST00000444191 ERCC6L2Q5T890 1561 aa14.2□□□□□ -0.14
HCFC1-203ENST00000444191 PRIM1P49642 420 aaKnown RBP14.2□□□□□ -0.14
HCFC1-203ENST00000444191 ERBB4Q15303 1308 aa14.19□□□□□ -0.14
HCFC1-203ENST00000444191 HAP1P54257 671 aaPredicted RBP14.19□□□□□ -0.14
HCFC1-203ENST00000444191 ZSCAN30Q86W11 494 aa14.19□□□□□ -0.14
HCFC1-203ENST00000444191 DRC7Q8IY82 874 aa14.19□□□□□ -0.14
HCFC1-203ENST00000444191 RBM25P49756 843 aaKnown RBP14.19□□□□□ -0.14
HCFC1-203ENST00000444191 KIAA2012Q0VF49 1180 aa14.19□□□□□ -0.14
HCFC1-203ENST00000444191 PLEKHM2Q8IWE5 1019 aa14.19□□□□□ -0.14
HCFC1-203ENST00000444191 ERC2O15083 957 aa14.19□□□□□ -0.14
HCFC1-203ENST00000444191 FIBPO43427 364 aa14.19□□□□□ -0.14
HCFC1-203ENST00000444191 ABCC2Q92887 1545 aa14.18□□□□□ -0.14
HCFC1-203ENST00000444191 ZSCAN23Q3MJ62 389 aa14.18□□□□□ -0.14
HCFC1-203ENST00000444191 NUTM1Q86Y26 1132 aa14.18□□□□□ -0.14
HCFC1-203ENST00000444191 PLEKHF1Q96S99 279 aa14.18□□□□□ -0.14
HCFC1-203ENST00000444191 CDC42BPBQ9Y5S2 1711 aa14.18□□□□□ -0.14
HCFC1-203ENST00000444191 FSD2A1L4K1 749 aa14.18□□□□□ -0.14
HCFC1-203ENST00000444191 GOLGA6L4A6NEF3 574 aa14.18□□□□□ -0.14
HCFC1-203ENST00000444191 ABCC11Q96J66 1382 aa14.18□□□□□ -0.14
HCFC1-203ENST00000444191 VPS37CA5D8V6 355 aaPredicted RBP14.17□□□□□ -0.14
HCFC1-203ENST00000444191 ZNF830Q96NB3 372 aaPredicted RBP14.17□□□□□ -0.14
HCFC1-203ENST00000444191 FOXO3O43524 673 aa14.17□□□□□ -0.14
HCFC1-203ENST00000444191 GSPT1P15170 499 aaKnown RBP14.17□□□□□ -0.14
HCFC1-203ENST00000444191 TTC22Q5TAA0 569 aa14.17□□□□□ -0.14
HCFC1-203ENST00000444191 SNX21Q969T3 373 aa14.17□□□□□ -0.14
HCFC1-203ENST00000444191 SURF6O75683 361 aaKnown RBP14.17□□□□□ -0.14
HCFC1-203ENST00000444191 RPGRIP1LQ68CZ1 1315 aa14.16□□□□□ -0.14
HCFC1-203ENST00000444191 FGD1P98174 961 aa14.16□□□□□ -0.14
HCFC1-203ENST00000444191 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.16□□□□□ -0.14
HCFC1-203ENST00000444191 SIRT2Q8IXJ6 389 aa14.16□□□□□ -0.14
HCFC1-203ENST00000444191 NUDT16Q96DE0 195 aaKnown RBP14.16□□□□□ -0.14
HCFC1-203ENST00000444191 CFAP44Q96MT7 982 aa14.16□□□□□ -0.14
HCFC1-203ENST00000444191 IFT57Q9NWB7 429 aa14.16□□□□□ -0.14
HCFC1-203ENST00000444191 KDM5AP29375 1690 aaKnown RBP14.16□□□□□ -0.14
HCFC1-203ENST00000444191 SYNMO15061 1565 aa14.16□□□□□ -0.14
HCFC1-203ENST00000444191 RTEL1-TNFRSF6BF6WH68 1400 aa14.16□□□□□ -0.14
HCFC1-203ENST00000444191 HSP90AB2PQ58FF8 381 aa14.16□□□□□ -0.14
HCFC1-203ENST00000444191 SYAP1Q96A49 352 aaPredicted RBP14.16□□□□□ -0.14
HCFC1-203ENST00000444191 KLHL40Q2TBA0 621 aa14.15□□□□□ -0.14
HCFC1-203ENST00000444191 E9PCH4 1651 aa14.15□□□□□ -0.14
HCFC1-203ENST00000444191 CHD1O14646 1710 aa14.15□□□□□ -0.14
HCFC1-203ENST00000444191 RBSNQ9H1K0 784 aa14.15□□□□□ -0.14
HCFC1-203ENST00000444191 PREX2Q70Z35 1606 aa14.15□□□□□ -0.14
HCFC1-203ENST00000444191 FOSBP53539 338 aa14.15□□□□□ -0.14
HCFC1-203ENST00000444191 SLC52A1Q9NWF4 448 aa14.15□□□□□ -0.14
HCFC1-203ENST00000444191 UQCRHLA0A096LP55 91 aa14.14□□□□□ -0.15
HCFC1-203ENST00000444191 UQCRHP07919 91 aa14.14□□□□□ -0.15
HCFC1-203ENST00000444191 SLC26A8Q96RN1 970 aa14.14□□□□□ -0.15
HCFC1-203ENST00000444191 SPC24Q8NBT2 197 aa14.14□□□□□ -0.15
HCFC1-203ENST00000444191 PRDM10Q9NQV6 1147 aa14.14□□□□□ -0.15
HCFC1-203ENST00000444191 G2E3Q7L622 706 aa14.13□□□□□ -0.15
HCFC1-203ENST00000444191 IL16Q14005 1332 aa14.13□□□□□ -0.15
HCFC1-203ENST00000444191 PHF23Q9BUL5 403 aaPredicted RBP14.13□□□□□ -0.15
HCFC1-203ENST00000444191 ZNF518AQ6AHZ1 1483 aa14.13□□□□□ -0.15
HCFC1-203ENST00000444191 GNAI2P04899 355 aa14.13□□□□□ -0.15
HCFC1-203ENST00000444191 FAM177BA6PVY3 158 aa14.12□□□□□ -0.15
HCFC1-203ENST00000444191 FBXW7Q969H0 707 aa14.12□□□□□ -0.15
HCFC1-203ENST00000444191 USP26Q9BXU7 913 aa14.12□□□□□ -0.15
HCFC1-203ENST00000444191 ISY1Q9ULR0 285 aaKnown RBP14.12□□□□□ -0.15
HCFC1-203ENST00000444191 CLTCL1P53675 1640 aa14.12□□□□□ -0.15
HCFC1-203ENST00000444191 RPAP2Q8IXW5 612 aaPredicted RBP14.12□□□□□ -0.15
HCFC1-203ENST00000444191 LRRCC1Q9C099 1032 aa14.12□□□□□ -0.15
HCFC1-203ENST00000444191 PPIP5K1Q6PFW1 1433 aa14.12□□□□□ -0.15
HCFC1-203ENST00000444191 CD109Q6YHK3 1445 aa14.12□□□□□ -0.15
HCFC1-203ENST00000444191 ANXA1P04083 346 aa14.11□□□□□ -0.15
HCFC1-203ENST00000444191 UBTFL1P0CB47 393 aaPredicted RBP14.11□□□□□ -0.15
HCFC1-203ENST00000444191 CWC27Q6UX04 472 aaKnown RBP14.11□□□□□ -0.15
HCFC1-203ENST00000444191 TMX3Q96JJ7 454 aa14.11□□□□□ -0.15
HCFC1-203ENST00000444191 MYO5CQ9NQX4 1742 aa14.11□□□□□ -0.15
HCFC1-203ENST00000444191 CCDC61Q9Y6R9 512 aa14.11□□□□□ -0.15
HCFC1-203ENST00000444191 USHBP1Q8N6Y0 703 aa14.11□□□□□ -0.15
HCFC1-203ENST00000444191 TSPY26PQ9H489 355 aa14.11□□□□□ -0.15
HCFC1-203ENST00000444191 USP25Q9UHP3 1055 aa14.11□□□□□ -0.15
HCFC1-203ENST00000444191 FAM69CQ0P6D2 419 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms