RNA–Protein interactions for RNA: ENST00000442457.1

SLC6A8-205, Transcript of solute carrier family 6 member 8, humanhuman

TSL 3

Gene SLC6A8, Length 523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-205ENST00000442457 CRB1P82279 1406 aa17.16■□□□□ 0.34
SLC6A8-205ENST00000442457 HDGFL2Q7Z4V5 671 aaPredicted RBP17.16■□□□□ 0.34
SLC6A8-205ENST00000442457 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.16■□□□□ 0.34
SLC6A8-205ENST00000442457 ZNF692Q9BU19 519 aaPredicted RBP17.16■□□□□ 0.34
SLC6A8-205ENST00000442457 USP35Q9P2H5 1018 aa17.16■□□□□ 0.34
SLC6A8-205ENST00000442457 AATKQ6ZMQ8 1374 aa17.15■□□□□ 0.34
SLC6A8-205ENST00000442457 KRT27Q7Z3Y8 459 aa17.15■□□□□ 0.34
SLC6A8-205ENST00000442457 PEAK1Q9H792 1746 aa17.14■□□□□ 0.33
SLC6A8-205ENST00000442457 LARP1Q6PKG0 1096 aaKnown RBP17.14■□□□□ 0.33
SLC6A8-205ENST00000442457 NME9Q86XW9 330 aa17.14■□□□□ 0.33
SLC6A8-205ENST00000442457 SLC12A5Q9H2X9 1139 aa17.14■□□□□ 0.33
SLC6A8-205ENST00000442457 ONECUT3O60422 494 aaPredicted RBP17.13■□□□□ 0.33
SLC6A8-205ENST00000442457 HOXD11P31277 338 aaPredicted RBP17.13■□□□□ 0.33
SLC6A8-205ENST00000442457 USP31Q70CQ4 1352 aa17.13■□□□□ 0.33
SLC6A8-205ENST00000442457 ANKRD36BQ8N2N9 1353 aa17.13■□□□□ 0.33
SLC6A8-205ENST00000442457 EVA1CP58658 441 aa17.12■□□□□ 0.33
SLC6A8-205ENST00000442457 TERF2IPQ9NYB0 399 aa17.12■□□□□ 0.33
SLC6A8-205ENST00000442457 ZRANB1Q9UGI0 708 aa17.12■□□□□ 0.33
SLC6A8-205ENST00000442457 ANKRD26Q9UPS8 1709 aa17.12■□□□□ 0.33
SLC6A8-205ENST00000442457 RREB1Q92766 1687 aa17.11■□□□□ 0.33
SLC6A8-205ENST00000442457 KCNH5Q8NCM2 988 aa17.11■□□□□ 0.33
SLC6A8-205ENST00000442457 TIMELESSQ9UNS1 1208 aa17.11■□□□□ 0.33
SLC6A8-205ENST00000442457 SBF2Q86WG5 1849 aa17.1■□□□□ 0.33
SLC6A8-205ENST00000442457 TMF1P82094 1093 aa17.1■□□□□ 0.33
SLC6A8-205ENST00000442457 FAM182BQ5T319 152 aa17.1■□□□□ 0.33
SLC6A8-205ENST00000442457 PUS7Q96PZ0 661 aaKnown RBP17.09■□□□□ 0.33
SLC6A8-205ENST00000442457 RGPD2P0DJD1 1756 aa17.09■□□□□ 0.33
SLC6A8-205ENST00000442457 NUP188Q5SRE5 1749 aa17.08■□□□□ 0.32
SLC6A8-205ENST00000442457 WDR17Q8IZU2 1322 aa17.07■□□□□ 0.32
SLC6A8-205ENST00000442457 BARGINQ6ZT62 677 aa17.07■□□□□ 0.32
SLC6A8-205ENST00000442457 ARHGEF25Q86VW2 580 aa17.07■□□□□ 0.32
SLC6A8-205ENST00000442457 TCP11L2Q8N4U5 519 aa17.07■□□□□ 0.32
SLC6A8-205ENST00000442457 RGPD3A6NKT7 1758 aaPredicted RBP17.07■□□□□ 0.32
SLC6A8-205ENST00000442457 RGPD4Q7Z3J3 1758 aa17.07■□□□□ 0.32
SLC6A8-205ENST00000442457 CCDC125Q86Z20 511 aa17.06■□□□□ 0.32
SLC6A8-205ENST00000442457 AXIN2Q9Y2T1 843 aa17.06■□□□□ 0.32
SLC6A8-205ENST00000442457 SLC24A1O60721 1099 aa17.05■□□□□ 0.32
SLC6A8-205ENST00000442457 SF3B2Q13435 895 aaKnown RBP17.05■□□□□ 0.32
SLC6A8-205ENST00000442457 TOM1L2Q6ZVM7 507 aa17.05■□□□□ 0.32
SLC6A8-205ENST00000442457 DISP2A7MBM2 1401 aa17.04■□□□□ 0.32
SLC6A8-205ENST00000442457 NSD3Q9BZ95 1437 aa17.04■□□□□ 0.32
SLC6A8-205ENST00000442457 DEFB132Q7Z7B7 95 aa17.04■□□□□ 0.32
SLC6A8-205ENST00000442457 SHANK3Q9BYB0 1731 aa17.04■□□□□ 0.32
SLC6A8-205ENST00000442457 OVOS2A0A0G2JMS6 1433 aa17.04■□□□□ 0.32
SLC6A8-205ENST00000442457 TNS2Q63HR2 1409 aa17.04■□□□□ 0.32
SLC6A8-205ENST00000442457 CSB-PGBD3P0DP91 1061 aa17.03■□□□□ 0.32
SLC6A8-205ENST00000442457 THRAP3Q9Y2W1 955 aaKnown RBP17.03■□□□□ 0.32
SLC6A8-205ENST00000442457 NHSQ6T4R5 1651 aa17.03■□□□□ 0.32
SLC6A8-205ENST00000442457 ERBB3P21860 1342 aa17.02■□□□□ 0.32
SLC6A8-205ENST00000442457 CDCA8Q53HL2 280 aa17.01■□□□□ 0.31
SLC6A8-205ENST00000442457 CCDC7Q96M83 1385 aa17.01■□□□□ 0.31
SLC6A8-205ENST00000442457 DOT1LQ8TEK3 1739 aa17■□□□□ 0.31
SLC6A8-205ENST00000442457 BAG6P46379 1132 aa16.99■□□□□ 0.31
SLC6A8-205ENST00000442457 PDE3BQ13370 1112 aa16.99■□□□□ 0.31
SLC6A8-205ENST00000442457 COG3Q96JB2 828 aa16.99■□□□□ 0.31
SLC6A8-205ENST00000442457 RTL1A6NKG5 1358 aa16.99■□□□□ 0.31
SLC6A8-205ENST00000442457 POLR3GLQ9BT43 218 aa16.98■□□□□ 0.31
SLC6A8-205ENST00000442457 LRP5O75197 1615 aa16.97■□□□□ 0.31
SLC6A8-205ENST00000442457 ZBTB22O15209 634 aa16.96■□□□□ 0.31
SLC6A8-205ENST00000442457 TRIM37O94972 964 aa16.96■□□□□ 0.31
SLC6A8-205ENST00000442457 HSPA5P11021 654 aaKnown RBP16.96■□□□□ 0.31
SLC6A8-205ENST00000442457 EIF4G2P78344 907 aaKnown RBP eCLIP16.96■□□□□ 0.31
SLC6A8-205ENST00000442457 DDB1Q16531 1140 aa16.96■□□□□ 0.31
SLC6A8-205ENST00000442457 FAM196AQ6ZSG2 479 aa16.96■□□□□ 0.31
SLC6A8-205ENST00000442457 ANKRD24Q8TF21 1146 aa16.96■□□□□ 0.31
SLC6A8-205ENST00000442457 CARD10Q9BWT7 1032 aa16.96■□□□□ 0.31
SLC6A8-205ENST00000442457 GGNBP2Q9H3C7 697 aa16.96■□□□□ 0.31
SLC6A8-205ENST00000442457 MAP3K19Q56UN5 1328 aa16.96■□□□□ 0.3
SLC6A8-205ENST00000442457 BTAF1O14981 1849 aa16.95■□□□□ 0.3
SLC6A8-205ENST00000442457 MAP2P11137 1827 aaKnown RBP16.94■□□□□ 0.3
SLC6A8-205ENST00000442457 SMG6Q86US8 1419 aaKnown RBP16.94■□□□□ 0.3
SLC6A8-205ENST00000442457 EN1Q05925 392 aaPredicted RBP16.93■□□□□ 0.3
SLC6A8-205ENST00000442457 NLRP2Q9NX02 1062 aa16.93■□□□□ 0.3
SLC6A8-205ENST00000442457 MEGF6O75095 1541 aa16.92■□□□□ 0.3
SLC6A8-205ENST00000442457 FYB1O15117 783 aa16.92■□□□□ 0.3
SLC6A8-205ENST00000442457 FBLN1P23142 703 aa16.92■□□□□ 0.3
SLC6A8-205ENST00000442457 LTV1Q96GA3 475 aaPredicted RBP16.92■□□□□ 0.3
SLC6A8-205ENST00000442457 CDCA7Q9BWT1 371 aaPredicted RBP16.92■□□□□ 0.3
SLC6A8-205ENST00000442457 PKD1L3Q7Z443 1732 aa16.91■□□□□ 0.3
SLC6A8-205ENST00000442457 HOXC9P31274 260 aa16.91■□□□□ 0.3
SLC6A8-205ENST00000442457 RRS1Q15050 365 aaKnown RBP16.91■□□□□ 0.3
SLC6A8-205ENST00000442457 CARD14Q9BXL6 1004 aa16.91■□□□□ 0.3
SLC6A8-205ENST00000442457 PARD3Q8TEW0 1356 aa16.9■□□□□ 0.3
SLC6A8-205ENST00000442457 FLT4P35916 1363 aa16.89■□□□□ 0.3
SLC6A8-205ENST00000442457 BCL9O00512 1426 aa16.89■□□□□ 0.29
SLC6A8-205ENST00000442457 AMPHP49418 695 aa16.89■□□□□ 0.29
SLC6A8-205ENST00000442457 EZH2Q15910 746 aaKnown RBP16.89■□□□□ 0.29
SLC6A8-205ENST00000442457 IP6K1Q92551 441 aa16.89■□□□□ 0.29
SLC6A8-205ENST00000442457 APBA3O96018 575 aa16.88■□□□□ 0.29
SLC6A8-205ENST00000442457 MARCH10Q8NA82 808 aaPredicted RBP16.88■□□□□ 0.29
SLC6A8-205ENST00000442457 PSDA5PKW4 1024 aaPredicted RBP16.87■□□□□ 0.29
SLC6A8-205ENST00000442457 IL2RBP14784 551 aa16.87■□□□□ 0.29
SLC6A8-205ENST00000442457 CGNL1Q0VF96 1302 aa16.87■□□□□ 0.29
SLC6A8-205ENST00000442457 TOGARAM1Q9Y4F4 1720 aa16.87■□□□□ 0.29
SLC6A8-205ENST00000442457 PAPPAQ13219 1627 aa16.86■□□□□ 0.29
SLC6A8-205ENST00000442457 FOXD4L1Q9NU39 408 aa16.86■□□□□ 0.29
SLC6A8-205ENST00000442457 SRCAPQ6ZRS2 3230 aa16.85■□□□□ 0.29
SLC6A8-205ENST00000442457 CASZ1Q86V15 1759 aa16.85■□□□□ 0.29
SLC6A8-205ENST00000442457 INSRP06213 1382 aa16.85■□□□□ 0.29
SLC6A8-205ENST00000442457 KIF24Q5T7B8 1368 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms