RNA–Protein interactions for RNA: ENST00000442250.5

ITGA6-206, Transcript of integrin subunit alpha 6, humanhuman

TSL 5 BASIC

Gene ITGA6, Length 3,393 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-206ENST00000442250 TRAK2O60296 914 aa11.78□□□□□ -0.52
ITGA6-206ENST00000442250 DUSP27Q5VZP5 1158 aa11.78□□□□□ -0.52
ITGA6-206ENST00000442250 ESPNB1AK53 854 aa11.78□□□□□ -0.52
ITGA6-206ENST00000442250 ZNF692Q9BU19 519 aaPredicted RBP11.78□□□□□ -0.52
ITGA6-206ENST00000442250 TNNQ9UQP3 1299 aa11.78□□□□□ -0.52
ITGA6-206ENST00000442250 ZNF428Q96B54 188 aa11.78□□□□□ -0.52
ITGA6-206ENST00000442250 A0A0G2JS52 829 aa11.77□□□□□ -0.53
ITGA6-206ENST00000442250 MCM4P33991 863 aa11.77□□□□□ -0.53
ITGA6-206ENST00000442250 TMPOP42166 694 aaKnown RBP11.76□□□□□ -0.53
ITGA6-206ENST00000442250 MCM10Q7L590 875 aa11.76□□□□□ -0.53
ITGA6-206ENST00000442250 FOXD4L1Q9NU39 408 aa11.76□□□□□ -0.53
ITGA6-206ENST00000442250 POLR1AO95602 1720 aaPredicted RBP11.76□□□□□ -0.53
ITGA6-206ENST00000442250 EXOSC9Q06265 439 aaKnown RBP11.76□□□□□ -0.53
ITGA6-206ENST00000442250 MFAP1P55081 439 aaKnown RBP11.75□□□□□ -0.53
ITGA6-206ENST00000442250 SLFN5Q08AF3 891 aa11.75□□□□□ -0.53
ITGA6-206ENST00000442250 NLRP1Q9C000 1473 aa11.75□□□□□ -0.53
ITGA6-206ENST00000442250 IFT172Q9UG01 1749 aa11.75□□□□□ -0.53
ITGA6-206ENST00000442250 SETBP1Q9Y6X0 1596 aa11.75□□□□□ -0.53
ITGA6-206ENST00000442250 LAMC1P11047 1609 aa11.75□□□□□ -0.53
ITGA6-206ENST00000442250 GRPEL1Q9HAV7 217 aa11.75□□□□□ -0.53
ITGA6-206ENST00000442250 FER1L4A9Z1Z3 1794 aa11.74□□□□□ -0.53
ITGA6-206ENST00000442250 CHRNA2Q15822 529 aa11.74□□□□□ -0.53
ITGA6-206ENST00000442250 ANTXR1Q9H6X2 564 aa11.74□□□□□ -0.53
ITGA6-206ENST00000442250 E9PSI1 815 aa11.74□□□□□ -0.53
ITGA6-206ENST00000442250 CSB-PGBD3P0DP91 1061 aa11.74□□□□□ -0.53
ITGA6-206ENST00000442250 EIF4A2Q14240 407 aaKnown RBP11.73□□□□□ -0.53
ITGA6-206ENST00000442250 SMC4Q9NTJ3 1288 aa11.73□□□□□ -0.53
ITGA6-206ENST00000442250 FAM13BQ9NYF5 915 aa11.73□□□□□ -0.53
ITGA6-206ENST00000442250 ARHGEF28Q8N1W1 1705 aaKnown RBP11.73□□□□□ -0.53
ITGA6-206ENST00000442250 MAP3K19Q56UN5 1328 aa11.73□□□□□ -0.53
ITGA6-206ENST00000442250 KDM4FA0A1W2PPD8 638 aa11.73□□□□□ -0.53
ITGA6-206ENST00000442250 LRRC59Q96AG4 307 aaKnown RBP11.73□□□□□ -0.53
ITGA6-206ENST00000442250 C3P01024 1663 aa11.73□□□□□ -0.53
ITGA6-206ENST00000442250 KRT24Q2M2I5 525 aa11.73□□□□□ -0.53
ITGA6-206ENST00000442250 KIAA1211Q6ZU35 1233 aa11.73□□□□□ -0.53
ITGA6-206ENST00000442250 MRE11P49959 708 aa11.72□□□□□ -0.53
ITGA6-206ENST00000442250 REREQ9P2R6 1566 aa11.72□□□□□ -0.53
ITGA6-206ENST00000442250 FSD2A1L4K1 749 aa11.71□□□□□ -0.53
ITGA6-206ENST00000442250 POLR3AO14802 1390 aaPredicted RBP11.71□□□□□ -0.53
ITGA6-206ENST00000442250 ZNF335Q9H4Z2 1342 aaPredicted RBP11.71□□□□□ -0.53
ITGA6-206ENST00000442250 SETD1BQ9UPS6 1966 aaKnown RBP11.71□□□□□ -0.53
ITGA6-206ENST00000442250 KRT28Q7Z3Y7 464 aa11.71□□□□□ -0.53
ITGA6-206ENST00000442250 FTSJ3Q8IY81 847 aaKnown RBP11.71□□□□□ -0.53
ITGA6-206ENST00000442250 KIAA1210Q9ULL0 1709 aa11.71□□□□□ -0.54
ITGA6-206ENST00000442250 MYOM1P52179 1685 aa11.7□□□□□ -0.54
ITGA6-206ENST00000442250 PUS7Q96PZ0 661 aaKnown RBP11.7□□□□□ -0.54
ITGA6-206ENST00000442250 CD163L1Q9NR16 1453 aa11.7□□□□□ -0.54
ITGA6-206ENST00000442250 CPS1P31327 1500 aa11.7□□□□□ -0.54
ITGA6-206ENST00000442250 NPC1L1Q9UHC9 1359 aa11.69□□□□□ -0.54
ITGA6-206ENST00000442250 GAS2L3Q86XJ1 694 aa11.69□□□□□ -0.54
ITGA6-206ENST00000442250 RTF1Q92541 710 aaKnown RBP11.69□□□□□ -0.54
ITGA6-206ENST00000442250 PLEKHG3A1L390 1219 aa11.69□□□□□ -0.54
ITGA6-206ENST00000442250 NPHP4O75161 1426 aaPredicted RBP11.69□□□□□ -0.54
ITGA6-206ENST00000442250 IL13P35225 146 aa11.68□□□□□ -0.54
ITGA6-206ENST00000442250 NLRP2Q9NX02 1062 aa11.68□□□□□ -0.54
ITGA6-206ENST00000442250 PIP4K2BP78356 416 aa11.68□□□□□ -0.54
ITGA6-206ENST00000442250 PRDM10Q9NQV6 1147 aa11.68□□□□□ -0.54
ITGA6-206ENST00000442250 TRIM35Q9UPQ4 493 aa11.68□□□□□ -0.54
ITGA6-206ENST00000442250 UBR1Q8IWV7 1749 aa11.68□□□□□ -0.54
ITGA6-206ENST00000442250 TBC1D32Q96NH3 1257 aa11.68□□□□□ -0.54
ITGA6-206ENST00000442250 PDZRN3Q9UPQ7 1066 aa11.68□□□□□ -0.54
ITGA6-206ENST00000442250 TMEM94Q12767 1356 aa11.68□□□□□ -0.54
ITGA6-206ENST00000442250 ITPRIPQ8IWB1 547 aa11.67□□□□□ -0.54
ITGA6-206ENST00000442250 CHMP5Q9NZZ3 219 aa11.67□□□□□ -0.54
ITGA6-206ENST00000442250 NINLQ9Y2I6 1382 aa11.67□□□□□ -0.54
ITGA6-206ENST00000442250 EDC4Q6P2E9 1401 aaKnown RBP11.67□□□□□ -0.54
ITGA6-206ENST00000442250 FCHSD2O94868 740 aa11.67□□□□□ -0.54
ITGA6-206ENST00000442250 TSPYL6Q8N831 410 aa11.67□□□□□ -0.54
ITGA6-206ENST00000442250 EYA1Q99502 592 aa11.67□□□□□ -0.54
ITGA6-206ENST00000442250 C19orf44Q9H6X5 657 aa11.67□□□□□ -0.54
ITGA6-206ENST00000442250 R3HCC1Q9Y3T6 440 aaKnown RBP11.67□□□□□ -0.54
ITGA6-206ENST00000442250 BLMP54132 1417 aaPredicted RBP11.66□□□□□ -0.54
ITGA6-206ENST00000442250 CEP170BQ9Y4F5 1589 aaPredicted RBP11.66□□□□□ -0.54
ITGA6-206ENST00000442250 STRN4Q9NRL3 753 aa11.66□□□□□ -0.54
ITGA6-206ENST00000442250 NEURL4Q96JN8 1562 aa11.66□□□□□ -0.54
ITGA6-206ENST00000442250 PDCL3Q9H2J4 239 aa11.66□□□□□ -0.54
ITGA6-206ENST00000442250 NSD2O96028 1365 aa11.66□□□□□ -0.54
ITGA6-206ENST00000442250 ATP7BP35670 1465 aa11.65□□□□□ -0.54
ITGA6-206ENST00000442250 FAM135BQ49AJ0 1406 aa11.65□□□□□ -0.54
ITGA6-206ENST00000442250 NFE2L2Q16236 605 aa11.65□□□□□ -0.54
ITGA6-206ENST00000442250 APBB1O00213 710 aa11.65□□□□□ -0.54
ITGA6-206ENST00000442250 NCLP19338 710 aaKnown RBP11.65□□□□□ -0.54
ITGA6-206ENST00000442250 SIRT1Q96EB6 747 aa11.65□□□□□ -0.54
ITGA6-206ENST00000442250 C22orf23Q9BZE7 217 aa11.65□□□□□ -0.54
ITGA6-206ENST00000442250 PCDHB15Q9Y5E8 787 aa11.65□□□□□ -0.54
ITGA6-206ENST00000442250 HSCBQ8IWL3 235 aa11.65□□□□□ -0.54
ITGA6-206ENST00000442250 SSH1Q8WYL5 1049 aa11.65□□□□□ -0.54
ITGA6-206ENST00000442250 PLEKHF1Q96S99 279 aa11.65□□□□□ -0.54
ITGA6-206ENST00000442250 GCP02774 474 aa11.64□□□□□ -0.55
ITGA6-206ENST00000442250 EIF2S2P20042 333 aaKnown RBP11.64□□□□□ -0.55
ITGA6-206ENST00000442250 ZHX1Q9UKY1 873 aaPredicted RBP11.64□□□□□ -0.55
ITGA6-206ENST00000442250 NRXN3Q9Y4C0 1643 aa11.64□□□□□ -0.55
ITGA6-206ENST00000442250 USP6P35125 1406 aa11.64□□□□□ -0.55
ITGA6-206ENST00000442250 RLBP1P12271 317 aa11.64□□□□□ -0.55
ITGA6-206ENST00000442250 SLC4A10Q6U841 1118 aa11.64□□□□□ -0.55
ITGA6-206ENST00000442250 C1orf115Q9H7X2 142 aa11.64□□□□□ -0.55
ITGA6-206ENST00000442250 RARSP54136 660 aaKnown RBP11.64□□□□□ -0.55
ITGA6-206ENST00000442250 MTHFSDQ2M296 383 aaKnown RBP11.64□□□□□ -0.55
ITGA6-206ENST00000442250 NKTRP30414 1462 aaKnown RBP11.64□□□□□ -0.55
ITGA6-206ENST00000442250 MSNP26038 577 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms