RNA–Protein interactions for RNA: ENST00000442029.5

PTPRN-206, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-206ENST00000442029 PUS7Q96PZ0 661 aaKnown RBP20.33■□□□□ 0.85
PTPRN-206ENST00000442029 SLC12A5Q9H2X9 1139 aa20.33■□□□□ 0.85
PTPRN-206ENST00000442029 CSB-PGBD3P0DP91 1061 aa20.32■□□□□ 0.84
PTPRN-206ENST00000442029 ARHGEF25Q86VW2 580 aa20.32■□□□□ 0.84
PTPRN-206ENST00000442029 EDC4Q6P2E9 1401 aaKnown RBP20.32■□□□□ 0.84
PTPRN-206ENST00000442029 WDR17Q8IZU2 1322 aa20.31■□□□□ 0.84
PTPRN-206ENST00000442029 PCGF6Q9BYE7 350 aa20.31■□□□□ 0.84
PTPRN-206ENST00000442029 ABCC6O95255 1503 aa20.31■□□□□ 0.84
PTPRN-206ENST00000442029 A0A1W2PP64 1363 aa20.31■□□□□ 0.84
PTPRN-206ENST00000442029 USP31Q70CQ4 1352 aa20.31■□□□□ 0.84
PTPRN-206ENST00000442029 NINLQ9Y2I6 1382 aa20.31■□□□□ 0.84
PTPRN-206ENST00000442029 LRRC37A3O60309 1634 aa20.31■□□□□ 0.84
PTPRN-206ENST00000442029 SBF2Q86WG5 1849 aa20.3■□□□□ 0.84
PTPRN-206ENST00000442029 TRIM37O94972 964 aa20.3■□□□□ 0.84
PTPRN-206ENST00000442029 EN1Q05925 392 aaPredicted RBP20.3■□□□□ 0.84
PTPRN-206ENST00000442029 NME9Q86XW9 330 aa20.3■□□□□ 0.84
PTPRN-206ENST00000442029 AXIN2Q9Y2T1 843 aa20.3■□□□□ 0.84
PTPRN-206ENST00000442029 TESK2Q96S53 571 aa20.29■□□□□ 0.84
PTPRN-206ENST00000442029 USP47Q96K76 1375 aa20.29■□□□□ 0.84
PTPRN-206ENST00000442029 DISP2A7MBM2 1401 aa20.28■□□□□ 0.84
PTPRN-206ENST00000442029 DDB1Q16531 1140 aa20.27■□□□□ 0.84
PTPRN-206ENST00000442029 C11orf95C9JLR9 678 aaPredicted RBP20.26■□□□□ 0.83
PTPRN-206ENST00000442029 TMF1P82094 1093 aa20.26■□□□□ 0.83
PTPRN-206ENST00000442029 KAT6BQ8WYB5 2073 aa20.26■□□□□ 0.83
PTPRN-206ENST00000442029 CLSPNQ9HAW4 1339 aa20.26■□□□□ 0.83
PTPRN-206ENST00000442029 APBA3O96018 575 aa20.25■□□□□ 0.83
PTPRN-206ENST00000442029 CDCA7Q9BWT1 371 aaPredicted RBP20.25■□□□□ 0.83
PTPRN-206ENST00000442029 TIMELESSQ9UNS1 1208 aa20.25■□□□□ 0.83
PTPRN-206ENST00000442029 OVOS2A0A0G2JMS6 1433 aa20.25■□□□□ 0.83
PTPRN-206ENST00000442029 OVOS2A0A0J9YW53 1432 aa20.25■□□□□ 0.83
PTPRN-206ENST00000442029 OVOS2Q6IE36 1432 aa20.25■□□□□ 0.83
PTPRN-206ENST00000442029 CARD10Q9BWT7 1032 aa20.24■□□□□ 0.83
PTPRN-206ENST00000442029 PEAK1Q9H792 1746 aa20.24■□□□□ 0.83
PTPRN-206ENST00000442029 RREB1Q92766 1687 aa20.23■□□□□ 0.83
PTPRN-206ENST00000442029 EZH2Q15910 746 aaKnown RBP20.23■□□□□ 0.83
PTPRN-206ENST00000442029 CCDC7Q96M83 1385 aa20.22■□□□□ 0.83
PTPRN-206ENST00000442029 PSDA5PKW4 1024 aaPredicted RBP20.22■□□□□ 0.83
PTPRN-206ENST00000442029 KIF20BQ96Q89 1820 aa20.22■□□□□ 0.83
PTPRN-206ENST00000442029 PARD3Q8TEW0 1356 aa20.21■□□□□ 0.83
PTPRN-206ENST00000442029 CDCA8Q53HL2 280 aa20.21■□□□□ 0.83
PTPRN-206ENST00000442029 FAM208AQ9UK61 1670 aaKnown RBP20.21■□□□□ 0.83
PTPRN-206ENST00000442029 ANKRD36BQ8N2N9 1353 aa20.21■□□□□ 0.83
PTPRN-206ENST00000442029 NUP188Q5SRE5 1749 aa20.2■□□□□ 0.82
PTPRN-206ENST00000442029 COG3Q96JB2 828 aa20.2■□□□□ 0.82
PTPRN-206ENST00000442029 CAMKK2Q96RR4 588 aa20.19■□□□□ 0.82
PTPRN-206ENST00000442029 ERBB3P21860 1342 aa20.19■□□□□ 0.82
PTPRN-206ENST00000442029 LRP5O75197 1615 aa20.19■□□□□ 0.82
PTPRN-206ENST00000442029 RGPD3A6NKT7 1758 aaPredicted RBP20.18■□□□□ 0.82
PTPRN-206ENST00000442029 RGPD4Q7Z3J3 1758 aa20.18■□□□□ 0.82
PTPRN-206ENST00000442029 NLRP2Q9NX02 1062 aa20.18■□□□□ 0.82
PTPRN-206ENST00000442029 EXOC5O00471 708 aa20.17■□□□□ 0.82
PTPRN-206ENST00000442029 ANKRD24Q8TF21 1146 aa20.16■□□□□ 0.82
PTPRN-206ENST00000442029 R3HDM1Q15032 1099 aaKnown RBP20.15■□□□□ 0.82
PTPRN-206ENST00000442029 MYOM1P52179 1685 aa20.15■□□□□ 0.82
PTPRN-206ENST00000442029 RGPD2P0DJD1 1756 aa20.15■□□□□ 0.82
PTPRN-206ENST00000442029 TNS2Q63HR2 1409 aa20.14■□□□□ 0.81
PTPRN-206ENST00000442029 NBPF14Q5TI25 921 aa20.14■□□□□ 0.81
PTPRN-206ENST00000442029 MARCH10Q8NA82 808 aaPredicted RBP20.14■□□□□ 0.81
PTPRN-206ENST00000442029 CCER1Q8TC90 406 aaPredicted RBP20.14■□□□□ 0.81
PTPRN-206ENST00000442029 AMPHP49418 695 aa20.12■□□□□ 0.81
PTPRN-206ENST00000442029 IP6K1Q92551 441 aa20.12■□□□□ 0.81
PTPRN-206ENST00000442029 LTV1Q96GA3 475 aaPredicted RBP20.12■□□□□ 0.81
PTPRN-206ENST00000442029 IL2RBP14784 551 aa20.11■□□□□ 0.81
PTPRN-206ENST00000442029 BCL11BQ9C0K0 894 aaPredicted RBP20.11■□□□□ 0.81
PTPRN-206ENST00000442029 BCL9O00512 1426 aa20.1■□□□□ 0.81
PTPRN-206ENST00000442029 SRCAPQ6ZRS2 3230 aa20.1■□□□□ 0.81
PTPRN-206ENST00000442029 NHSQ6T4R5 1651 aa20.1■□□□□ 0.81
PTPRN-206ENST00000442029 MAP3K19Q56UN5 1328 aa20.09■□□□□ 0.81
PTPRN-206ENST00000442029 GGNBP2Q9H3C7 697 aa20.09■□□□□ 0.81
PTPRN-206ENST00000442029 FYB1O15117 783 aa20.07■□□□□ 0.8
PTPRN-206ENST00000442029 PLSCR1O15162 318 aa20.07■□□□□ 0.8
PTPRN-206ENST00000442029 HOXC9P31274 260 aa20.07■□□□□ 0.8
PTPRN-206ENST00000442029 RTL1A6NKG5 1358 aa20.07■□□□□ 0.8
PTPRN-206ENST00000442029 FBLN1P23142 703 aa20.06■□□□□ 0.8
PTPRN-206ENST00000442029 POLR3GLQ9BT43 218 aa20.06■□□□□ 0.8
PTPRN-206ENST00000442029 MAP2P11137 1827 aaKnown RBP20.06■□□□□ 0.8
PTPRN-206ENST00000442029 BTAF1O14981 1849 aa20.05■□□□□ 0.8
PTPRN-206ENST00000442029 SMG6Q86US8 1419 aaKnown RBP20.04■□□□□ 0.8
PTPRN-206ENST00000442029 NSD3Q9BZ95 1437 aa20.04■□□□□ 0.8
PTPRN-206ENST00000442029 RRS1Q15050 365 aaKnown RBP20.04■□□□□ 0.8
PTPRN-206ENST00000442029 PTF1AQ7RTS3 328 aa20.04■□□□□ 0.8
PTPRN-206ENST00000442029 EIF4G2P78344 907 aaKnown RBP eCLIP20.03■□□□□ 0.8
PTPRN-206ENST00000442029 ACSBG1Q96GR2 724 aa20.02■□□□□ 0.8
PTPRN-206ENST00000442029 ANKRD26Q9UPS8 1709 aa20.01■□□□□ 0.79
PTPRN-206ENST00000442029 SHANK3Q9BYB0 1731 aa20■□□□□ 0.79
PTPRN-206ENST00000442029 DOT1LQ8TEK3 1739 aa19.99■□□□□ 0.79
PTPRN-206ENST00000442029 KCNQ2O43526 872 aa19.99■□□□□ 0.79
PTPRN-206ENST00000442029 DDX54Q8TDD1 881 aaKnown RBP19.99■□□□□ 0.79
PTPRN-206ENST00000442029 CARD14Q9BXL6 1004 aa19.99■□□□□ 0.79
PTPRN-206ENST00000442029 FLT4P35916 1363 aa19.98■□□□□ 0.79
PTPRN-206ENST00000442029 CGNL1Q0VF96 1302 aa19.98■□□□□ 0.79
PTPRN-206ENST00000442029 KIF24Q5T7B8 1368 aa19.97■□□□□ 0.79
PTPRN-206ENST00000442029 HSPA5P11021 654 aaKnown RBP19.97■□□□□ 0.79
PTPRN-206ENST00000442029 TXNRD1Q16881 649 aa19.97■□□□□ 0.79
PTPRN-206ENST00000442029 INSRP06213 1382 aa19.95■□□□□ 0.79
PTPRN-206ENST00000442029 CASZ1Q86V15 1759 aa19.95■□□□□ 0.78
PTPRN-206ENST00000442029 STK32BQ9NY57 414 aa19.95■□□□□ 0.78
PTPRN-206ENST00000442029 MEGF6O75095 1541 aa19.95■□□□□ 0.78
PTPRN-206ENST00000442029 HSP90AB2PQ58FF8 381 aa19.94■□□□□ 0.78
PTPRN-206ENST00000442029 NBPF6Q5VWK0 638 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms