RNA–Protein interactions for RNA: ENST00000441657.1

SP140-206, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 387 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-206ENST00000441657 VGFO15240 615 aaPredicted RBP9.47□□□□□ -0.89
SP140-206ENST00000441657 CHRNA2Q15822 529 aa9.47□□□□□ -0.89
SP140-206ENST00000441657 WAPLQ7Z5K2 1190 aa9.47□□□□□ -0.89
SP140-206ENST00000441657 RBM46Q8TBY0 533 aaKnown RBP9.47□□□□□ -0.89
SP140-206ENST00000441657 PMFBP1Q8TBY8 1022 aa9.47□□□□□ -0.89
SP140-206ENST00000441657 PEAK1Q9H792 1746 aa9.46□□□□□ -0.89
SP140-206ENST00000441657 FSTL1Q12841 308 aa9.46□□□□□ -0.9
SP140-206ENST00000441657 ANKRD50Q9ULJ7 1429 aa9.46□□□□□ -0.9
SP140-206ENST00000441657 LARP1Q6PKG0 1096 aaKnown RBP9.45□□□□□ -0.9
SP140-206ENST00000441657 KIAA0232Q92628 1395 aa9.45□□□□□ -0.9
SP140-206ENST00000441657 SSH2Q76I76 1423 aa9.45□□□□□ -0.9
SP140-206ENST00000441657 ARHGEF28Q8N1W1 1705 aaKnown RBP9.45□□□□□ -0.9
SP140-206ENST00000441657 PARP4Q9UKK3 1724 aaKnown RBP9.45□□□□□ -0.9
SP140-206ENST00000441657 RGPD8O14715 1765 aaPredicted RBP9.45□□□□□ -0.9
SP140-206ENST00000441657 ATP7BP35670 1465 aa9.44□□□□□ -0.9
SP140-206ENST00000441657 USP19O94966 1318 aa9.43□□□□□ -0.9
SP140-206ENST00000441657 SPDYE4A6NLX3 237 aa9.43□□□□□ -0.9
SP140-206ENST00000441657 COL24A1Q17RW2 1714 aa9.42□□□□□ -0.9
SP140-206ENST00000441657 TULP4Q9NRJ4 1543 aa9.42□□□□□ -0.9
SP140-206ENST00000441657 DDB1Q16531 1140 aa9.42□□□□□ -0.9
SP140-206ENST00000441657 C16orf71Q8IYS4 520 aaPredicted RBP9.42□□□□□ -0.9
SP140-206ENST00000441657 STK26Q9P289 416 aa9.42□□□□□ -0.9
SP140-206ENST00000441657 TOPAZ1Q8N9V7 1692 aa9.42□□□□□ -0.9
SP140-206ENST00000441657 ALS2Q96Q42 1657 aa9.42□□□□□ -0.9
SP140-206ENST00000441657 BCL9O00512 1426 aa9.41□□□□□ -0.9
SP140-206ENST00000441657 RGS19P49795 217 aa9.41□□□□□ -0.9
SP140-206ENST00000441657 ZNF827Q17R98 1081 aa9.41□□□□□ -0.9
SP140-206ENST00000441657 NMRK2Q9NPI5 230 aa9.41□□□□□ -0.9
SP140-206ENST00000441657 PRDM10Q9NQV6 1147 aa9.41□□□□□ -0.9
SP140-206ENST00000441657 GPRASP1Q5JY77 1395 aa9.4□□□□□ -0.9
SP140-206ENST00000441657 PLEKHH1Q9ULM0 1364 aa9.4□□□□□ -0.9
SP140-206ENST00000441657 TRPM3Q9HCF6 1732 aaPredicted RBP9.4□□□□□ -0.9
SP140-206ENST00000441657 ZC3H6P61129 1189 aaKnown RBP9.4□□□□□ -0.9
SP140-206ENST00000441657 PIP4P2Q8N4L2 257 aa9.4□□□□□ -0.9
SP140-206ENST00000441657 PDE4DIPQ5VU43 2346 aa9.4□□□□□ -0.9
SP140-206ENST00000441657 KIAA1210Q9ULL0 1709 aa9.39□□□□□ -0.91
SP140-206ENST00000441657 CRYBG1Q9Y4K1 1723 aa9.39□□□□□ -0.91
SP140-206ENST00000441657 PITPNM1O00562 1244 aa9.39□□□□□ -0.91
SP140-206ENST00000441657 MARCH10Q8NA82 808 aaPredicted RBP9.39□□□□□ -0.91
SP140-206ENST00000441657 ABHD8Q96I13 439 aa9.39□□□□□ -0.91
SP140-206ENST00000441657 CD2APQ9Y5K6 639 aa9.39□□□□□ -0.91
SP140-206ENST00000441657 CLTCL1P53675 1640 aa9.38□□□□□ -0.91
SP140-206ENST00000441657 PAPPAQ13219 1627 aa9.38□□□□□ -0.91
SP140-206ENST00000441657 ABCC11Q96J66 1382 aa9.37□□□□□ -0.91
SP140-206ENST00000441657 PAK3O75914 559 aaPredicted RBP9.37□□□□□ -0.91
SP140-206ENST00000441657 RPGRIP1LQ68CZ1 1315 aa9.36□□□□□ -0.91
SP140-206ENST00000441657 PNPLA7Q6ZV29 1317 aa9.36□□□□□ -0.91
SP140-206ENST00000441657 ACIN1Q9UKV3 1341 aaKnown RBP9.36□□□□□ -0.91
SP140-206ENST00000441657 PLCB2Q00722 1185 aa9.36□□□□□ -0.91
SP140-206ENST00000441657 KANK4Q5T7N3 995 aaPredicted RBP9.36□□□□□ -0.91
SP140-206ENST00000441657 IFT172Q9UG01 1749 aa9.36□□□□□ -0.91
SP140-206ENST00000441657 NUP155O75694 1391 aa9.36□□□□□ -0.91
SP140-206ENST00000441657 ANKRD30BQ9BXX2 1392 aa9.36□□□□□ -0.91
SP140-206ENST00000441657 FOXN1O15353 648 aa9.35□□□□□ -0.91
SP140-206ENST00000441657 TFCP2L1Q9NZI6 479 aa9.35□□□□□ -0.91
SP140-206ENST00000441657 LRRC37A3O60309 1634 aa9.34□□□□□ -0.91
SP140-206ENST00000441657 PHRF1Q9P1Y6 1649 aaKnown RBP9.34□□□□□ -0.91
SP140-206ENST00000441657 QSER1Q2KHR3 1735 aa9.34□□□□□ -0.91
SP140-206ENST00000441657 CTCFP49711 727 aaPredicted RBP9.34□□□□□ -0.91
SP140-206ENST00000441657 VASPP50552 380 aaPredicted RBP9.34□□□□□ -0.91
SP140-206ENST00000441657 SMC1BQ8NDV3 1235 aa9.34□□□□□ -0.91
SP140-206ENST00000441657 SIRT1Q96EB6 747 aa9.34□□□□□ -0.91
SP140-206ENST00000441657 LRRC4BQ9NT99 713 aa9.34□□□□□ -0.91
SP140-206ENST00000441657 KIF1BO60333 1816 aa9.33□□□□□ -0.92
SP140-206ENST00000441657 CRB1P82279 1406 aa9.33□□□□□ -0.92
SP140-206ENST00000441657 ANKARQ7Z5J8 1434 aa9.33□□□□□ -0.92
SP140-206ENST00000441657 CCDC85CA6NKD9 419 aa9.33□□□□□ -0.92
SP140-206ENST00000441657 CDCA7Q9BWT1 371 aaPredicted RBP9.33□□□□□ -0.92
SP140-206ENST00000441657 BRD4O60885 1362 aaPredicted RBP9.33□□□□□ -0.92
SP140-206ENST00000441657 MKRN4PQ13434 485 aaPredicted RBP9.32□□□□□ -0.92
SP140-206ENST00000441657 NGDNQ8NEJ9 315 aaKnown RBP9.32□□□□□ -0.92
SP140-206ENST00000441657 AKAP12Q02952 1782 aa9.32□□□□□ -0.92
SP140-206ENST00000441657 IGSF1Q8N6C5 1336 aa9.31□□□□□ -0.92
SP140-206ENST00000441657 KNDC1Q76NI1 1749 aa9.31□□□□□ -0.92
SP140-206ENST00000441657 FXR2P51116 673 aaKnown RBP eCLIP9.31□□□□□ -0.92
SP140-206ENST00000441657 TMEM132EQ6IEE7 984 aa9.31□□□□□ -0.92
SP140-206ENST00000441657 SP7Q8TDD2 431 aaPredicted RBP9.31□□□□□ -0.92
SP140-206ENST00000441657 HIRIP3Q9BW71 556 aaPredicted RBP9.31□□□□□ -0.92
SP140-206ENST00000441657 CPDO75976 1380 aa9.31□□□□□ -0.92
SP140-206ENST00000441657 LMO7Q8WWI1 1683 aa9.3□□□□□ -0.92
SP140-206ENST00000441657 COL5A2P05997 1499 aaPredicted RBP9.3□□□□□ -0.92
SP140-206ENST00000441657 SLC27A3Q5K4L6 730 aa9.3□□□□□ -0.92
SP140-206ENST00000441657 NUTM2GQ5VZR2 741 aa9.3□□□□□ -0.92
SP140-206ENST00000441657 AIDAQ96BJ3 306 aa9.3□□□□□ -0.92
SP140-206ENST00000441657 C10orf71Q711Q0 1435 aa9.3□□□□□ -0.92
SP140-206ENST00000441657 KAT6BQ8WYB5 2073 aa9.29□□□□□ -0.92
SP140-206ENST00000441657 EXOC5O00471 708 aa9.29□□□□□ -0.92
SP140-206ENST00000441657 TOM1L2Q6ZVM7 507 aa9.29□□□□□ -0.92
SP140-206ENST00000441657 KDM2BQ8NHM5 1336 aa9.29□□□□□ -0.92
SP140-206ENST00000441657 CICQ96RK0 1608 aaPredicted RBP9.28□□□□□ -0.92
SP140-206ENST00000441657 SPDYE2BA6NHP3 402 aa9.28□□□□□ -0.92
SP140-206ENST00000441657 SPDYE6P0CI01 402 aa9.28□□□□□ -0.92
SP140-206ENST00000441657 SPDYE2Q495Y8 402 aa9.28□□□□□ -0.92
SP140-206ENST00000441657 MSL1Q68DK7 614 aa9.28□□□□□ -0.92
SP140-206ENST00000441657 ACSBG1Q96GR2 724 aa9.28□□□□□ -0.92
SP140-206ENST00000441657 YTHDC2Q9H6S0 1430 aaKnown RBP9.28□□□□□ -0.92
SP140-206ENST00000441657 NHSQ6T4R5 1651 aa9.27□□□□□ -0.93
SP140-206ENST00000441657 LBX1P52954 281 aa9.27□□□□□ -0.93
SP140-206ENST00000441657 RRAGCQ9HB90 399 aa9.27□□□□□ -0.93
SP140-206ENST00000441657 USP6P35125 1406 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms