RNA–Protein interactions for RNA: ENST00000441439.6

LMO3-208, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-208ENST00000441439 SASS6Q6UVJ0 657 aa9.78□□□□□ -0.84
LMO3-208ENST00000441439 RGPD1P0DJD0 1748 aa9.78□□□□□ -0.84
LMO3-208ENST00000441439 BAG4O95429 457 aaKnown RBP9.78□□□□□ -0.84
LMO3-208ENST00000441439 DMTNQ08495 405 aa9.78□□□□□ -0.84
LMO3-208ENST00000441439 OSCARQ8IYS5 282 aa9.77□□□□□ -0.84
LMO3-208ENST00000441439 TCP11L2Q8N4U5 519 aa9.77□□□□□ -0.84
LMO3-208ENST00000441439 XRN1Q8IZH2 1706 aaKnown RBP9.77□□□□□ -0.85
LMO3-208ENST00000441439 PHRF1Q9P1Y6 1649 aaKnown RBP9.77□□□□□ -0.85
LMO3-208ENST00000441439 PTCH1Q13635 1447 aa9.77□□□□□ -0.85
LMO3-208ENST00000441439 NUCB2P80303 420 aa9.77□□□□□ -0.85
LMO3-208ENST00000441439 ZNF428Q96B54 188 aa9.77□□□□□ -0.85
LMO3-208ENST00000441439 FBLN2P98095 1184 aa9.76□□□□□ -0.85
LMO3-208ENST00000441439 CCDC94Q9BW85 323 aaPredicted RBP9.76□□□□□ -0.85
LMO3-208ENST00000441439 TNNQ9UQP3 1299 aa9.76□□□□□ -0.85
LMO3-208ENST00000441439 NSD3Q9BZ95 1437 aa9.76□□□□□ -0.85
LMO3-208ENST00000441439 KIF24Q5T7B8 1368 aa9.76□□□□□ -0.85
LMO3-208ENST00000441439 ALDH1L2Q3SY69 923 aa9.76□□□□□ -0.85
LMO3-208ENST00000441439 CCDC39Q9UFE4 941 aa9.76□□□□□ -0.85
LMO3-208ENST00000441439 CD163L1Q9NR16 1453 aa9.76□□□□□ -0.85
LMO3-208ENST00000441439 SLIT1O75093 1534 aa9.76□□□□□ -0.85
LMO3-208ENST00000441439 GCC1Q96CN9 775 aa9.76□□□□□ -0.85
LMO3-208ENST00000441439 CWC22Q9HCG8 908 aaKnown RBP9.76□□□□□ -0.85
LMO3-208ENST00000441439 LMBRD1Q9NUN5 540 aa9.76□□□□□ -0.85
LMO3-208ENST00000441439 ATF7IPQ6VMQ6 1270 aa9.75□□□□□ -0.85
LMO3-208ENST00000441439 TRIM27P14373 513 aa9.75□□□□□ -0.85
LMO3-208ENST00000441439 ZSCAN23Q3MJ62 389 aa9.75□□□□□ -0.85
LMO3-208ENST00000441439 UQCRHLA0A096LP55 91 aa9.74□□□□□ -0.85
LMO3-208ENST00000441439 UQCRHP07919 91 aa9.74□□□□□ -0.85
LMO3-208ENST00000441439 GTPBP4Q9BZE4 634 aaKnown RBP9.74□□□□□ -0.85
LMO3-208ENST00000441439 CHMP4BQ9H444 224 aaKnown RBP9.74□□□□□ -0.85
LMO3-208ENST00000441439 CHD1LQ86WJ1 897 aa9.74□□□□□ -0.85
LMO3-208ENST00000441439 PRIMPOLQ96LW4 560 aa9.74□□□□□ -0.85
LMO3-208ENST00000441439 ITSN1Q15811 1721 aa9.74□□□□□ -0.85
LMO3-208ENST00000441439 SPRYD3Q8NCJ5 442 aa9.74□□□□□ -0.85
LMO3-208ENST00000441439 RABEP1Q15276 862 aa9.73□□□□□ -0.85
LMO3-208ENST00000441439 MYRIPQ8NFW9 859 aa9.73□□□□□ -0.85
LMO3-208ENST00000441439 ARHGAP23Q9P227 1491 aa9.73□□□□□ -0.85
LMO3-208ENST00000441439 KIF20AO95235 890 aa9.73□□□□□ -0.85
LMO3-208ENST00000441439 SSFA2P28290 1259 aa9.73□□□□□ -0.85
LMO3-208ENST00000441439 LRSAM1Q6UWE0 723 aa9.73□□□□□ -0.85
LMO3-208ENST00000441439 PLEKHF1Q96S99 279 aa9.73□□□□□ -0.85
LMO3-208ENST00000441439 AK9Q5TCS8 1911 aa9.72□□□□□ -0.85
LMO3-208ENST00000441439 HMGN5P82970 282 aaKnown RBP9.72□□□□□ -0.85
LMO3-208ENST00000441439 FTSJ3Q8IY81 847 aaKnown RBP9.72□□□□□ -0.85
LMO3-208ENST00000441439 GAS2L2Q8NHY3 880 aa9.72□□□□□ -0.85
LMO3-208ENST00000441439 ARHGAP45Q92619 1136 aa9.72□□□□□ -0.85
LMO3-208ENST00000441439 RBSNQ9H1K0 784 aa9.72□□□□□ -0.85
LMO3-208ENST00000441439 DDX49Q9Y6V7 483 aaKnown RBP9.72□□□□□ -0.85
LMO3-208ENST00000441439 CD2BP2O95400 341 aaKnown RBP9.72□□□□□ -0.85
LMO3-208ENST00000441439 ZSCAN20P17040 1043 aaPredicted RBP9.72□□□□□ -0.85
LMO3-208ENST00000441439 NCLP19338 710 aaKnown RBP9.72□□□□□ -0.85
LMO3-208ENST00000441439 ARXQ96QS3 562 aa9.72□□□□□ -0.85
LMO3-208ENST00000441439 A2ML1A8K2U0 1454 aa9.72□□□□□ -0.85
LMO3-208ENST00000441439 R3HCC1Q9Y3T6 440 aaKnown RBP9.72□□□□□ -0.85
LMO3-208ENST00000441439 ANKRD36BQ8N2N9 1353 aa9.71□□□□□ -0.85
LMO3-208ENST00000441439 IPO8O15397 1037 aaKnown RBP9.71□□□□□ -0.85
LMO3-208ENST00000441439 RBM10P98175 930 aaKnown RBP9.71□□□□□ -0.85
LMO3-208ENST00000441439 IL17RAQ96F46 866 aa9.71□□□□□ -0.85
LMO3-208ENST00000441439 CFAP53Q96M91 514 aa9.71□□□□□ -0.85
LMO3-208ENST00000441439 FMN2Q9NZ56 1722 aa9.7□□□□□ -0.86
LMO3-208ENST00000441439 TBC1D9Q6ZT07 1266 aa9.7□□□□□ -0.86
LMO3-208ENST00000441439 C14orf93Q9H972 538 aaKnown RBP9.7□□□□□ -0.86
LMO3-208ENST00000441439 CDC45O75419 566 aa9.69□□□□□ -0.86
LMO3-208ENST00000441439 UVSSAQ2YD98 709 aa9.69□□□□□ -0.86
LMO3-208ENST00000441439 SPTLC3Q9NUV7 552 aa9.69□□□□□ -0.86
LMO3-208ENST00000441439 PNPLA6Q8IY17 1366 aa9.69□□□□□ -0.86
LMO3-208ENST00000441439 LETM1O95202 739 aaPredicted RBP9.69□□□□□ -0.86
LMO3-208ENST00000441439 MBD3O95983 291 aa9.69□□□□□ -0.86
LMO3-208ENST00000441439 SSH1Q8WYL5 1049 aa9.69□□□□□ -0.86
LMO3-208ENST00000441439 MORC1Q86VD1 984 aa9.69□□□□□ -0.86
LMO3-208ENST00000441439 FER1L4A9Z1Z3 1794 aa9.68□□□□□ -0.86
LMO3-208ENST00000441439 CAMTA1Q9Y6Y1 1673 aa9.68□□□□□ -0.86
LMO3-208ENST00000441439 AFAP1Q8N556 730 aa9.68□□□□□ -0.86
LMO3-208ENST00000441439 TMEM57Q8N5G2 664 aa9.68□□□□□ -0.86
LMO3-208ENST00000441439 FAM13BQ9NYF5 915 aa9.68□□□□□ -0.86
LMO3-208ENST00000441439 TRIM35Q9UPQ4 493 aa9.68□□□□□ -0.86
LMO3-208ENST00000441439 ATP7BP35670 1465 aa9.68□□□□□ -0.86
LMO3-208ENST00000441439 ATAD2Q6PL18 1390 aa9.68□□□□□ -0.86
LMO3-208ENST00000441439 GPT2Q8TD30 523 aa9.68□□□□□ -0.86
LMO3-208ENST00000441439 SMC4Q9NTJ3 1288 aa9.68□□□□□ -0.86
LMO3-208ENST00000441439 ADAMTSL3P82987 1691 aa9.68□□□□□ -0.86
LMO3-208ENST00000441439 PRIM1P49642 420 aaKnown RBP9.68□□□□□ -0.86
LMO3-208ENST00000441439 TAF3Q5VWG9 929 aa9.68□□□□□ -0.86
LMO3-208ENST00000441439 LRRC37A3O60309 1634 aa9.67□□□□□ -0.86
LMO3-208ENST00000441439 ABCC4O15439 1325 aa9.67□□□□□ -0.86
LMO3-208ENST00000441439 ZBTB7BO15156 539 aaPredicted RBP9.67□□□□□ -0.86
LMO3-208ENST00000441439 XPCQ01831 940 aaPredicted RBP9.67□□□□□ -0.86
LMO3-208ENST00000441439 KIAA2012Q0VF49 1180 aa9.67□□□□□ -0.86
LMO3-208ENST00000441439 PIBF1Q8WXW3 757 aa9.67□□□□□ -0.86
LMO3-208ENST00000441439 FAM135BQ49AJ0 1406 aa9.67□□□□□ -0.86
LMO3-208ENST00000441439 FAM184AQ8NB25 1140 aa9.66□□□□□ -0.86
LMO3-208ENST00000441439 SIRT1Q96EB6 747 aa9.66□□□□□ -0.86
LMO3-208ENST00000441439 NOB1Q9ULX3 412 aaKnown RBP9.66□□□□□ -0.86
LMO3-208ENST00000441439 ITPRIPQ8IWB1 547 aa9.66□□□□□ -0.86
LMO3-208ENST00000441439 EXOSC9Q06265 439 aaKnown RBP9.66□□□□□ -0.86
LMO3-208ENST00000441439 SYCP1Q15431 976 aa9.66□□□□□ -0.86
LMO3-208ENST00000441439 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.66□□□□□ -0.86
LMO3-208ENST00000441439 TSPOAP1O95153 1857 aa9.65□□□□□ -0.86
LMO3-208ENST00000441439 TMPOP42166 694 aaKnown RBP9.65□□□□□ -0.86
LMO3-208ENST00000441439 FGD1P98174 961 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms