RNA–Protein interactions for RNA: ENST00000441343.5

ATP1A3-202, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

TSL 2

Gene ATP1A3, Length 3,818 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-202ENST00000441343 MFAP1P55081 439 aaKnown RBP15.27■□□□□ 0.04
ATP1A3-202ENST00000441343 SSH1Q8WYL5 1049 aa15.27■□□□□ 0.04
ATP1A3-202ENST00000441343 EVC2Q86UK5 1308 aa15.27■□□□□ 0.03
ATP1A3-202ENST00000441343 DNAJC2Q99543 621 aaKnown RBP15.26■□□□□ 0.03
ATP1A3-202ENST00000441343 ANKRD36BQ8N2N9 1353 aa15.26■□□□□ 0.03
ATP1A3-202ENST00000441343 USP32Q8NFA0 1604 aa15.26■□□□□ 0.03
ATP1A3-202ENST00000441343 C22orf23Q9BZE7 217 aa15.26■□□□□ 0.03
ATP1A3-202ENST00000441343 VGFO15240 615 aaPredicted RBP15.26■□□□□ 0.03
ATP1A3-202ENST00000441343 ITPRIPQ8IWB1 547 aa15.26■□□□□ 0.03
ATP1A3-202ENST00000441343 SLC52A1Q9NWF4 448 aa15.26■□□□□ 0.03
ATP1A3-202ENST00000441343 GGNBP2Q9H3C7 697 aa15.25■□□□□ 0.03
ATP1A3-202ENST00000441343 TRIM35Q9UPQ4 493 aa15.25■□□□□ 0.03
ATP1A3-202ENST00000441343 CD109Q6YHK3 1445 aa15.25■□□□□ 0.03
ATP1A3-202ENST00000441343 TULP4Q9NRJ4 1543 aa15.25■□□□□ 0.03
ATP1A3-202ENST00000441343 TMPOP42166 694 aaKnown RBP15.25■□□□□ 0.03
ATP1A3-202ENST00000441343 PLEKHF1Q96S99 279 aa15.24■□□□□ 0.03
ATP1A3-202ENST00000441343 TRIM6-TRIM34B2RNG4 842 aa15.24■□□□□ 0.03
ATP1A3-202ENST00000441343 MYCNP04198 464 aaPredicted RBP15.24■□□□□ 0.03
ATP1A3-202ENST00000441343 TRIM34Q9BYJ4 488 aa15.24■□□□□ 0.03
ATP1A3-202ENST00000441343 ZKSCAN5Q9Y2L8 839 aa15.24■□□□□ 0.03
ATP1A3-202ENST00000441343 HDAC5Q9UQL6 1122 aa15.24■□□□□ 0.03
ATP1A3-202ENST00000441343 ADGRB2O60241 1585 aa15.23■□□□□ 0.03
ATP1A3-202ENST00000441343 HDAC1Q13547 482 aaPredicted RBP15.23■□□□□ 0.03
ATP1A3-202ENST00000441343 ATF7IPQ6VMQ6 1270 aa15.23■□□□□ 0.03
ATP1A3-202ENST00000441343 MYRIPQ8NFW9 859 aa15.23■□□□□ 0.03
ATP1A3-202ENST00000441343 NOB1Q9ULX3 412 aaKnown RBP15.23■□□□□ 0.03
ATP1A3-202ENST00000441343 ASXL2Q76L83 1435 aa15.23■□□□□ 0.03
ATP1A3-202ENST00000441343 RPGRIP1LQ68CZ1 1315 aa15.23■□□□□ 0.03
ATP1A3-202ENST00000441343 NSD2O96028 1365 aa15.23■□□□□ 0.03
ATP1A3-202ENST00000441343 CT47B1P0C2W7 299 aaPredicted RBP15.22■□□□□ 0.03
ATP1A3-202ENST00000441343 TNPO1Q92973 898 aaKnown RBP15.22■□□□□ 0.03
ATP1A3-202ENST00000441343 DDX19BQ9UMR2 479 aa15.22■□□□□ 0.03
ATP1A3-202ENST00000441343 GLI2P10070 1586 aa15.22■□□□□ 0.03
ATP1A3-202ENST00000441343 U2AF2P26368 475 aaKnown RBP eCLIP15.22■□□□□ 0.03
ATP1A3-202ENST00000441343 TMEM57Q8N5G2 664 aa15.22■□□□□ 0.03
ATP1A3-202ENST00000441343 STK26Q9P289 416 aa15.22■□□□□ 0.03
ATP1A3-202ENST00000441343 A0A1W2PP64 1363 aa15.21■□□□□ 0.03
ATP1A3-202ENST00000441343 APPP05067 770 aa15.21■□□□□ 0.03
ATP1A3-202ENST00000441343 PUS7Q96PZ0 661 aaKnown RBP15.21■□□□□ 0.03
ATP1A3-202ENST00000441343 HS1BP3Q53T59 392 aa15.21■□□□□ 0.02
ATP1A3-202ENST00000441343 SMC5Q8IY18 1101 aa15.2■□□□□ 0.02
ATP1A3-202ENST00000441343 SRPK2P78362 688 aaKnown RBP15.2■□□□□ 0.02
ATP1A3-202ENST00000441343 TRERF1Q96PN7 1200 aa15.2■□□□□ 0.02
ATP1A3-202ENST00000441343 PDCL2Q8N4E4 241 aa15.19■□□□□ 0.02
ATP1A3-202ENST00000441343 ZBTB40Q9NUA8 1239 aa15.19■□□□□ 0.02
ATP1A3-202ENST00000441343 FRMPD1Q5SYB0 1578 aa15.19■□□□□ 0.02
ATP1A3-202ENST00000441343 ARHGEF28Q8N1W1 1705 aaKnown RBP15.19■□□□□ 0.02
ATP1A3-202ENST00000441343 ABCC11Q96J66 1382 aa15.19■□□□□ 0.02
ATP1A3-202ENST00000441343 SKOR2Q2VWA4 1001 aaPredicted RBP15.18■□□□□ 0.02
ATP1A3-202ENST00000441343 SLC20A2Q08357 652 aa15.18■□□□□ 0.02
ATP1A3-202ENST00000441343 FYB1O15117 783 aa15.18■□□□□ 0.02
ATP1A3-202ENST00000441343 SOX12O15370 315 aa15.18■□□□□ 0.02
ATP1A3-202ENST00000441343 GBP4Q96PP9 640 aa15.18■□□□□ 0.02
ATP1A3-202ENST00000441343 CAPN2P17655 700 aa15.17■□□□□ 0.02
ATP1A3-202ENST00000441343 ZNF692Q9BU19 519 aaPredicted RBP15.17■□□□□ 0.02
ATP1A3-202ENST00000441343 LNPKQ9C0E8 428 aa15.17■□□□□ 0.02
ATP1A3-202ENST00000441343 COL3A1P02461 1466 aaPredicted RBP15.17■□□□□ 0.02
ATP1A3-202ENST00000441343 TIGD1Q96MW7 591 aa15.16■□□□□ 0.02
ATP1A3-202ENST00000441343 ABCC3O15438 1527 aa15.16■□□□□ 0.02
ATP1A3-202ENST00000441343 MLECQ14165 292 aa15.16■□□□□ 0.02
ATP1A3-202ENST00000441343 CAMSAP1Q5T5Y3 1602 aa15.15■□□□□ 0.02
ATP1A3-202ENST00000441343 HSCBQ8IWL3 235 aa15.15■□□□□ 0.02
ATP1A3-202ENST00000441343 BCCIPQ9P287 314 aaKnown RBP eCLIP15.15■□□□□ 0.02
ATP1A3-202ENST00000441343 MINK1Q8N4C8 1332 aaPredicted RBP15.15■□□□□ 0.02
ATP1A3-202ENST00000441343 BCL2L12Q9HB09 334 aa15.15■□□□□ 0.02
ATP1A3-202ENST00000441343 DDX49Q9Y6V7 483 aaKnown RBP15.15■□□□□ 0.02
ATP1A3-202ENST00000441343 IL16Q14005 1332 aa15.15■□□□□ 0.02
ATP1A3-202ENST00000441343 SIGLEC1Q9BZZ2 1709 aa15.14■□□□□ 0.01
ATP1A3-202ENST00000441343 NUCB1Q02818 461 aa15.14■□□□□ 0.01
ATP1A3-202ENST00000441343 IDI1Q13907 227 aa15.14■□□□□ 0.01
ATP1A3-202ENST00000441343 NEXMIFQ5QGS0 1516 aa15.14■□□□□ 0.01
ATP1A3-202ENST00000441343 HECW2Q9P2P5 1572 aa15.14■□□□□ 0.01
ATP1A3-202ENST00000441343 RBSNQ9H1K0 784 aa15.14■□□□□ 0.01
ATP1A3-202ENST00000441343 FOXD4L1Q9NU39 408 aa15.14■□□□□ 0.01
ATP1A3-202ENST00000441343 POGZQ7Z3K3 1410 aa15.14■□□□□ 0.01
ATP1A3-202ENST00000441343 DIAPH1O60610 1272 aaKnown RBP15.14■□□□□ 0.01
ATP1A3-202ENST00000441343 KIF3AQ9Y496 699 aa15.14■□□□□ 0.01
ATP1A3-202ENST00000441343 IPO8O15397 1037 aaKnown RBP15.13■□□□□ 0.01
ATP1A3-202ENST00000441343 FBLN1P23142 703 aa15.13■□□□□ 0.01
ATP1A3-202ENST00000441343 KIF16BQ96L93 1317 aa15.13■□□□□ 0.01
ATP1A3-202ENST00000441343 PRR29P0C7W0 189 aa15.13■□□□□ 0.01
ATP1A3-202ENST00000441343 PSEN1P49768 467 aa15.13■□□□□ 0.01
ATP1A3-202ENST00000441343 MPNDQ8N594 471 aa15.13■□□□□ 0.01
ATP1A3-202ENST00000441343 PDLIM2Q96JY6 352 aa15.13■□□□□ 0.01
ATP1A3-202ENST00000441343 CCDC66A2RUB6 948 aa15.12■□□□□ 0.01
ATP1A3-202ENST00000441343 MLH3Q9UHC1 1453 aa15.12■□□□□ 0.01
ATP1A3-202ENST00000441343 TERF2IPQ9NYB0 399 aa15.12■□□□□ 0.01
ATP1A3-202ENST00000441343 ERICH4A6NGS2 130 aa15.12■□□□□ 0.01
ATP1A3-202ENST00000441343 CHD1LQ86WJ1 897 aa15.12■□□□□ 0.01
ATP1A3-202ENST00000441343 PRAM1Q96QH2 718 aa15.12■□□□□ 0.01
ATP1A3-202ENST00000441343 MCM5P33992 734 aa15.11■□□□□ 0.01
ATP1A3-202ENST00000441343 RBM25P49756 843 aaKnown RBP15.11■□□□□ 0.01
ATP1A3-202ENST00000441343 MMP14P50281 582 aa15.11■□□□□ 0.01
ATP1A3-202ENST00000441343 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.11■□□□□ 0.01
ATP1A3-202ENST00000441343 RAPGEF3O95398 923 aa15.11■□□□□ 0.01
ATP1A3-202ENST00000441343 PTMAP06454 111 aaKnown RBP15.11■□□□□ 0.01
ATP1A3-202ENST00000441343 KIAA2012Q0VF49 1180 aa15.11■□□□□ 0.01
ATP1A3-202ENST00000441343 CCDC39Q9UFE4 941 aa15.11■□□□□ 0.01
ATP1A3-202ENST00000441343 C1orf115Q9H7X2 142 aa15.1■□□□□ 0.01
ATP1A3-202ENST00000441343 CLGNO14967 610 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms