RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 GDPD2Q9HCC8 539 aa17.42■□□□□ 0.38
PCNX1-202ENST00000439984 FKBP5Q13451 457 aaPredicted RBP17.42■□□□□ 0.38
PCNX1-202ENST00000439984 BAG4O95429 457 aaKnown RBP17.41■□□□□ 0.38
PCNX1-202ENST00000439984 HMOX1P09601 288 aa17.41■□□□□ 0.38
PCNX1-202ENST00000439984 CHMP4CQ96CF2 233 aa17.41■□□□□ 0.38
PCNX1-202ENST00000439984 KIF18AQ8NI77 898 aa17.41■□□□□ 0.38
PCNX1-202ENST00000439984 LTV1Q96GA3 475 aaPredicted RBP17.41■□□□□ 0.38
PCNX1-202ENST00000439984 EIF2S2P20042 333 aaKnown RBP17.41■□□□□ 0.38
PCNX1-202ENST00000439984 KRT85P78386 507 aa17.4■□□□□ 0.38
PCNX1-202ENST00000439984 AKAP17AQ02040 695 aaKnown RBP17.4■□□□□ 0.38
PCNX1-202ENST00000439984 PAXIP1Q6ZW49 1069 aaPredicted RBP17.4■□□□□ 0.38
PCNX1-202ENST00000439984 PTPRKQ15262 1439 aa17.4■□□□□ 0.38
PCNX1-202ENST00000439984 LMAN1P49257 510 aa17.4■□□□□ 0.38
PCNX1-202ENST00000439984 NOLC1Q14978 699 aaKnown RBP eCLIP17.4■□□□□ 0.38
PCNX1-202ENST00000439984 TRIM34Q9BYJ4 488 aa17.4■□□□□ 0.38
PCNX1-202ENST00000439984 CPLX2Q6PUV4 134 aaKnown RBP17.39■□□□□ 0.38
PCNX1-202ENST00000439984 KRT222Q8N1A0 295 aa17.39■□□□□ 0.38
PCNX1-202ENST00000439984 PDIA4P13667 645 aaKnown RBP17.39■□□□□ 0.37
PCNX1-202ENST00000439984 TBC1D32Q96NH3 1257 aa17.39■□□□□ 0.37
PCNX1-202ENST00000439984 URI1O94763 535 aaPredicted RBP17.39■□□□□ 0.37
PCNX1-202ENST00000439984 TMX1Q9H3N1 280 aa17.39■□□□□ 0.37
PCNX1-202ENST00000439984 ABCC5O15440 1437 aa17.39■□□□□ 0.37
PCNX1-202ENST00000439984 MAP4K4O95819 1239 aaPredicted RBP17.39■□□□□ 0.37
PCNX1-202ENST00000439984 MAP3K11Q16584 847 aa17.39■□□□□ 0.37
PCNX1-202ENST00000439984 CCDC183Q5T5S1 534 aa17.38■□□□□ 0.37
PCNX1-202ENST00000439984 LRRCC1Q9C099 1032 aa17.38■□□□□ 0.37
PCNX1-202ENST00000439984 ZKSCAN5Q9Y2L8 839 aa17.38■□□□□ 0.37
PCNX1-202ENST00000439984 ANKRD30BQ9BXX2 1392 aa17.38■□□□□ 0.37
PCNX1-202ENST00000439984 KLHL40Q2TBA0 621 aa17.38■□□□□ 0.37
PCNX1-202ENST00000439984 C9orf78Q9NZ63 289 aaPredicted RBP17.38■□□□□ 0.37
PCNX1-202ENST00000439984 PLB1Q6P1J6 1458 aa17.38■□□□□ 0.37
PCNX1-202ENST00000439984 IGHDP01880 384 aa17.38■□□□□ 0.37
PCNX1-202ENST00000439984 LARP1BQ659C4 914 aaKnown RBP17.37■□□□□ 0.37
PCNX1-202ENST00000439984 TICAM2Q86XR7 235 aa17.37■□□□□ 0.37
PCNX1-202ENST00000439984 PDCP20941 246 aa17.37■□□□□ 0.37
PCNX1-202ENST00000439984 SLFN5Q08AF3 891 aa17.37■□□□□ 0.37
PCNX1-202ENST00000439984 C8orf34Q49A92 452 aa17.37■□□□□ 0.37
PCNX1-202ENST00000439984 SPATA32Q96LK8 384 aa17.37■□□□□ 0.37
PCNX1-202ENST00000439984 CLIP2Q9UDT6 1046 aa17.37■□□□□ 0.37
PCNX1-202ENST00000439984 MTHFSP49914 203 aa17.37■□□□□ 0.37
PCNX1-202ENST00000439984 MARCH6O60337 910 aa17.36■□□□□ 0.37
PCNX1-202ENST00000439984 CNTROBQ8N137 903 aa17.36■□□□□ 0.37
PCNX1-202ENST00000439984 ME1P48163 572 aa17.36■□□□□ 0.37
PCNX1-202ENST00000439984 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.36■□□□□ 0.37
PCNX1-202ENST00000439984 V9GYY5 206 aaPredicted RBP17.36■□□□□ 0.37
PCNX1-202ENST00000439984 PSMA5P28066 241 aa17.36■□□□□ 0.37
PCNX1-202ENST00000439984 GNAI1P63096 354 aa17.36■□□□□ 0.37
PCNX1-202ENST00000439984 NINLQ9Y2I6 1382 aa17.35■□□□□ 0.37
PCNX1-202ENST00000439984 ATF7IPQ6VMQ6 1270 aa17.35■□□□□ 0.37
PCNX1-202ENST00000439984 TTC12Q9H892 705 aaPredicted RBP17.35■□□□□ 0.37
PCNX1-202ENST00000439984 WWC1Q8IX03 1113 aa17.35■□□□□ 0.37
PCNX1-202ENST00000439984 NUTM2FA1L443 756 aa17.34■□□□□ 0.37
PCNX1-202ENST00000439984 FERMT3Q86UX7 667 aa17.34■□□□□ 0.37
PCNX1-202ENST00000439984 STK38Q15208 465 aa17.34■□□□□ 0.37
PCNX1-202ENST00000439984 NFXL1Q6ZNB6 911 aa17.34■□□□□ 0.37
PCNX1-202ENST00000439984 SMARCE1Q969G3 411 aa17.34■□□□□ 0.37
PCNX1-202ENST00000439984 UPF3BQ9BZI7 483 aaKnown RBP17.34■□□□□ 0.37
PCNX1-202ENST00000439984 ZNF608Q9ULD9 1512 aaPredicted RBP17.34■□□□□ 0.37
PCNX1-202ENST00000439984 ZBTB9Q96C00 473 aa17.34■□□□□ 0.37
PCNX1-202ENST00000439984 BMS1Q14692 1282 aaKnown RBP17.33■□□□□ 0.37
PCNX1-202ENST00000439984 CKAP2LQ8IYA6 745 aa17.33■□□□□ 0.37
PCNX1-202ENST00000439984 AMPHP49418 695 aa17.33■□□□□ 0.36
PCNX1-202ENST00000439984 CEP135Q66GS9 1140 aa17.33■□□□□ 0.36
PCNX1-202ENST00000439984 ZNF526Q8TF50 670 aaPredicted RBP17.33■□□□□ 0.36
PCNX1-202ENST00000439984 MNAT1P51948 309 aa17.33■□□□□ 0.36
PCNX1-202ENST00000439984 STK11IPQ8N1F8 1099 aa17.33■□□□□ 0.36
PCNX1-202ENST00000439984 LRSAM1Q6UWE0 723 aa17.33■□□□□ 0.36
PCNX1-202ENST00000439984 ARHGEF11O15085 1522 aa17.32■□□□□ 0.36
PCNX1-202ENST00000439984 CAMSAP2Q08AD1 1489 aa17.32■□□□□ 0.36
PCNX1-202ENST00000439984 HCLS1P14317 486 aaPredicted RBP17.32■□□□□ 0.36
PCNX1-202ENST00000439984 ATP2B1P20020 1258 aa17.32■□□□□ 0.36
PCNX1-202ENST00000439984 CEP57L1Q8IYX8 460 aa17.32■□□□□ 0.36
PCNX1-202ENST00000439984 PRIM1P49642 420 aaKnown RBP17.32■□□□□ 0.36
PCNX1-202ENST00000439984 HDGFP51858 240 aaKnown RBP17.32■□□□□ 0.36
PCNX1-202ENST00000439984 SHTN1A0MZ66 631 aa17.31■□□□□ 0.36
PCNX1-202ENST00000439984 CYP46A1Q9Y6A2 500 aa17.31■□□□□ 0.36
PCNX1-202ENST00000439984 G3BP1Q13283 466 aaKnown RBP eCLIP17.31■□□□□ 0.36
PCNX1-202ENST00000439984 PPFIBP1Q86W92 1011 aa17.31■□□□□ 0.36
PCNX1-202ENST00000439984 GOLGA6L10A6NI86 522 aa17.31■□□□□ 0.36
PCNX1-202ENST00000439984 CFAP70Q5T0N1 1121 aa17.31■□□□□ 0.36
PCNX1-202ENST00000439984 TMEM57Q8N5G2 664 aa17.31■□□□□ 0.36
PCNX1-202ENST00000439984 ZNF396Q96N95 335 aaPredicted RBP17.31■□□□□ 0.36
PCNX1-202ENST00000439984 GGNBP2Q9H3C7 697 aa17.31■□□□□ 0.36
PCNX1-202ENST00000439984 FBXO3Q9UK99 471 aa17.31■□□□□ 0.36
PCNX1-202ENST00000439984 FILIP1LQ4L180 1135 aa17.31■□□□□ 0.36
PCNX1-202ENST00000439984 KIF2AO00139 706 aaPredicted RBP17.3■□□□□ 0.36
PCNX1-202ENST00000439984 SFPQP23246 707 aaKnown RBP eCLIP17.3■□□□□ 0.36
PCNX1-202ENST00000439984 SURF6O75683 361 aaKnown RBP17.3■□□□□ 0.36
PCNX1-202ENST00000439984 C10orf67Q8IYJ2 551 aa17.3■□□□□ 0.36
PCNX1-202ENST00000439984 FSD1Q9BTV5 496 aa17.3■□□□□ 0.36
PCNX1-202ENST00000439984 VGFO15240 615 aaPredicted RBP17.3■□□□□ 0.36
PCNX1-202ENST00000439984 THOC2Q8NI27 1593 aaKnown RBP17.3■□□□□ 0.36
PCNX1-202ENST00000439984 VPS53Q5VIR6 699 aa17.29■□□□□ 0.36
PCNX1-202ENST00000439984 LRRFIP2Q9Y608 721 aaKnown RBP17.29■□□□□ 0.36
PCNX1-202ENST00000439984 GRIN2AQ12879 1464 aa17.29■□□□□ 0.36
PCNX1-202ENST00000439984 ODF2Q5BJF6 829 aa17.29■□□□□ 0.36
PCNX1-202ENST00000439984 TXLNBQ8N3L3 684 aa17.29■□□□□ 0.36
PCNX1-202ENST00000439984 DNAAF4Q8WXU2 420 aa17.29■□□□□ 0.36
PCNX1-202ENST00000439984 EVC2Q86UK5 1308 aa17.29■□□□□ 0.36
PCNX1-202ENST00000439984 CASQ1P31415 396 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms