RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 PANK1Q8TE04 598 aa19.46■□□□□ 0.71
CPSF7-205ENST00000439958 SMC4Q9NTJ3 1288 aa19.46■□□□□ 0.71
CPSF7-205ENST00000439958 XRN1Q8IZH2 1706 aaKnown RBP19.46■□□□□ 0.71
CPSF7-205ENST00000439958 AATKQ6ZMQ8 1374 aa19.46■□□□□ 0.71
CPSF7-205ENST00000439958 FANCIQ9NVI1 1328 aa19.46■□□□□ 0.71
CPSF7-205ENST00000439958 HAP1P54257 671 aaPredicted RBP19.46■□□□□ 0.71
CPSF7-205ENST00000439958 ADGRB2O60241 1585 aa19.45■□□□□ 0.7
CPSF7-205ENST00000439958 RNF123Q5XPI4 1314 aa19.45■□□□□ 0.7
CPSF7-205ENST00000439958 ZNF142P52746 1687 aaPredicted RBP19.45■□□□□ 0.7
CPSF7-205ENST00000439958 ANKARQ7Z5J8 1434 aa19.45■□□□□ 0.7
CPSF7-205ENST00000439958 COG6Q9Y2V7 657 aa19.45■□□□□ 0.7
CPSF7-205ENST00000439958 COL3A1P02461 1466 aaPredicted RBP19.44■□□□□ 0.7
CPSF7-205ENST00000439958 OVOS2A0A0J9YW53 1432 aa19.44■□□□□ 0.7
CPSF7-205ENST00000439958 OVOS2Q6IE36 1432 aa19.44■□□□□ 0.7
CPSF7-205ENST00000439958 EYA1Q99502 592 aa19.43■□□□□ 0.7
CPSF7-205ENST00000439958 HOXC9P31274 260 aa19.43■□□□□ 0.7
CPSF7-205ENST00000439958 RTF1Q92541 710 aaKnown RBP19.43■□□□□ 0.7
CPSF7-205ENST00000439958 FLT4P35916 1363 aa19.43■□□□□ 0.7
CPSF7-205ENST00000439958 CADPS2Q86UW7 1296 aa19.42■□□□□ 0.7
CPSF7-205ENST00000439958 MIS18AQ9NYP9 233 aa19.42■□□□□ 0.7
CPSF7-205ENST00000439958 CCDC27Q2M243 656 aa19.42■□□□□ 0.7
CPSF7-205ENST00000439958 FTSJ3Q8IY81 847 aaKnown RBP19.42■□□□□ 0.7
CPSF7-205ENST00000439958 TNNQ9UQP3 1299 aa19.42■□□□□ 0.7
CPSF7-205ENST00000439958 CDK12Q9NYV4 1490 aaPredicted RBP19.41■□□□□ 0.7
CPSF7-205ENST00000439958 TRMT2AQ8IZ69 625 aaKnown RBP19.41■□□□□ 0.7
CPSF7-205ENST00000439958 CHD2O14647 1828 aaKnown RBP19.41■□□□□ 0.7
CPSF7-205ENST00000439958 MSH6P52701 1360 aa19.41■□□□□ 0.7
CPSF7-205ENST00000439958 LRRC59Q96AG4 307 aaKnown RBP19.41■□□□□ 0.7
CPSF7-205ENST00000439958 GCP02774 474 aa19.41■□□□□ 0.7
CPSF7-205ENST00000439958 BCL11AQ9H165 835 aa19.41■□□□□ 0.7
CPSF7-205ENST00000439958 MON2Q7Z3U7 1717 aa19.4■□□□□ 0.7
CPSF7-205ENST00000439958 LRRC7Q96NW7 1537 aa19.4■□□□□ 0.7
CPSF7-205ENST00000439958 RARSP54136 660 aaKnown RBP19.4■□□□□ 0.7
CPSF7-205ENST00000439958 NALCNQ8IZF0 1738 aa19.4■□□□□ 0.7
CPSF7-205ENST00000439958 SKAP1Q86WV1 359 aa19.39■□□□□ 0.7
CPSF7-205ENST00000439958 ANKRD26Q9UPS8 1709 aa19.39■□□□□ 0.7
CPSF7-205ENST00000439958 CSB-PGBD3P0DP91 1061 aa19.39■□□□□ 0.69
CPSF7-205ENST00000439958 TSHZ2Q9NRE2 1034 aa19.39■□□□□ 0.69
CPSF7-205ENST00000439958 SBNO1A3KN83 1393 aa19.39■□□□□ 0.69
CPSF7-205ENST00000439958 LMOD3Q0VAK6 560 aa19.38■□□□□ 0.69
CPSF7-205ENST00000439958 CHRNA2Q15822 529 aa19.38■□□□□ 0.69
CPSF7-205ENST00000439958 IQSEC2Q5JU85 1478 aa19.38■□□□□ 0.69
CPSF7-205ENST00000439958 AKAP12Q02952 1782 aa19.37■□□□□ 0.69
CPSF7-205ENST00000439958 SSH2Q76I76 1423 aa19.37■□□□□ 0.69
CPSF7-205ENST00000439958 PHF23Q9BUL5 403 aaPredicted RBP19.37■□□□□ 0.69
CPSF7-205ENST00000439958 KCNH5Q8NCM2 988 aa19.37■□□□□ 0.69
CPSF7-205ENST00000439958 CALD1Q05682 793 aaKnown RBP19.36■□□□□ 0.69
CPSF7-205ENST00000439958 MTHFSDQ2M296 383 aaKnown RBP19.36■□□□□ 0.69
CPSF7-205ENST00000439958 USP31Q70CQ4 1352 aa19.35■□□□□ 0.69
CPSF7-205ENST00000439958 SSH1Q8WYL5 1049 aa19.35■□□□□ 0.69
CPSF7-205ENST00000439958 KRT24Q2M2I5 525 aa19.35■□□□□ 0.69
CPSF7-205ENST00000439958 GNAI1P63096 354 aa19.34■□□□□ 0.69
CPSF7-205ENST00000439958 MBIPQ9NS73 344 aa19.34■□□□□ 0.69
CPSF7-205ENST00000439958 C1orf167Q5SNV9 1468 aa19.34■□□□□ 0.69
CPSF7-205ENST00000439958 TSPYL6Q8N831 410 aa19.34■□□□□ 0.69
CPSF7-205ENST00000439958 NLRP2Q9NX02 1062 aa19.34■□□□□ 0.69
CPSF7-205ENST00000439958 TOPAZ1Q8N9V7 1692 aa19.34■□□□□ 0.69
CPSF7-205ENST00000439958 NECTIN2Q92692 538 aa19.33■□□□□ 0.68
CPSF7-205ENST00000439958 FMN2Q9NZ56 1722 aa19.33■□□□□ 0.68
CPSF7-205ENST00000439958 ITPRIPQ8IWB1 547 aa19.33■□□□□ 0.68
CPSF7-205ENST00000439958 NBPF6Q5VWK0 638 aa19.32■□□□□ 0.68
CPSF7-205ENST00000439958 NBPF4Q96M43 638 aa19.32■□□□□ 0.68
CPSF7-205ENST00000439958 NPHP3Q7Z494 1330 aa19.31■□□□□ 0.68
CPSF7-205ENST00000439958 NOB1Q9ULX3 412 aaKnown RBP19.31■□□□□ 0.68
CPSF7-205ENST00000439958 RLBP1P12271 317 aa19.3■□□□□ 0.68
CPSF7-205ENST00000439958 IP6K1Q92551 441 aa19.3■□□□□ 0.68
CPSF7-205ENST00000439958 SLAIN2Q9P270 581 aa19.3■□□□□ 0.68
CPSF7-205ENST00000439958 TWISTNBQ3B726 338 aaPredicted RBP19.3■□□□□ 0.68
CPSF7-205ENST00000439958 ZKSCAN2Q63HK3 967 aa19.3■□□□□ 0.68
CPSF7-205ENST00000439958 ANKRD24Q8TF21 1146 aa19.3■□□□□ 0.68
CPSF7-205ENST00000439958 TSPYL4Q9UJ04 414 aa19.3■□□□□ 0.68
CPSF7-205ENST00000439958 LMTK3Q96Q04 1460 aa19.29■□□□□ 0.68
CPSF7-205ENST00000439958 PIK3C2AO00443 1686 aa19.29■□□□□ 0.68
CPSF7-205ENST00000439958 RGS3P49796 1198 aa19.29■□□□□ 0.68
CPSF7-205ENST00000439958 C8orf58Q8NAV2 365 aa19.29■□□□□ 0.68
CPSF7-205ENST00000439958 AXIN2Q9Y2T1 843 aa19.28■□□□□ 0.68
CPSF7-205ENST00000439958 GAS2L2Q8NHY3 880 aa19.28■□□□□ 0.68
CPSF7-205ENST00000439958 IFT57Q9NWB7 429 aa19.28■□□□□ 0.68
CPSF7-205ENST00000439958 BRINP3Q76B58 766 aa19.27■□□□□ 0.68
CPSF7-205ENST00000439958 CFAP44Q96MT7 982 aa19.27■□□□□ 0.68
CPSF7-205ENST00000439958 DZIP1LQ8IYY4 767 aaKnown RBP19.27■□□□□ 0.68
CPSF7-205ENST00000439958 NRKQ7Z2Y5 1582 aa19.27■□□□□ 0.67
CPSF7-205ENST00000439958 USP35Q9P2H5 1018 aa19.26■□□□□ 0.67
CPSF7-205ENST00000439958 IL16Q14005 1332 aa19.26■□□□□ 0.67
CPSF7-205ENST00000439958 IGSF1Q8N6C5 1336 aa19.26■□□□□ 0.67
CPSF7-205ENST00000439958 ZNF530Q6P9A1 599 aaPredicted RBP19.25■□□□□ 0.67
CPSF7-205ENST00000439958 ARHGEF25Q86VW2 580 aa19.25■□□□□ 0.67
CPSF7-205ENST00000439958 GNAT3A8MTJ3 354 aa19.25■□□□□ 0.67
CPSF7-205ENST00000439958 PRDM11Q9NQV5 511 aa19.24■□□□□ 0.67
CPSF7-205ENST00000439958 PEAK1Q9H792 1746 aa19.24■□□□□ 0.67
CPSF7-205ENST00000439958 MST1RQ04912 1400 aa19.24■□□□□ 0.67
CPSF7-205ENST00000439958 TRIM27P14373 513 aa19.24■□□□□ 0.67
CPSF7-205ENST00000439958 ARHGEF10O15013 1369 aa19.24■□□□□ 0.67
CPSF7-205ENST00000439958 MPRIPQ6WCQ1 1025 aa19.24■□□□□ 0.67
CPSF7-205ENST00000439958 PDE3AQ14432 1141 aa19.23■□□□□ 0.67
CPSF7-205ENST00000439958 STRN4Q9NRL3 753 aa19.23■□□□□ 0.67
CPSF7-205ENST00000439958 IPO8O15397 1037 aaKnown RBP19.22■□□□□ 0.67
CPSF7-205ENST00000439958 C1orf141Q5JVX7 400 aa19.22■□□□□ 0.67
CPSF7-205ENST00000439958 ATF7IPQ6VMQ6 1270 aa19.22■□□□□ 0.67
CPSF7-205ENST00000439958 RAPGEF4Q8WZA2 1011 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms