RNA–Protein interactions for RNA: ENST00000439406.5

HCG20-208, Transcript of HLA complex group 20, humanhuman

TSL 2 BASIC

Gene HCG20, Length 1,202 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG20-208ENST00000439406 SPDYE1Q8NFV5 336 aaPredicted RBP10.79□□□□□ -0.68
HCG20-208ENST00000439406 PCDHB8Q9UN66 801 aa10.79□□□□□ -0.68
HCG20-208ENST00000439406 PHF8Q9UPP1 1060 aa10.79□□□□□ -0.68
HCG20-208ENST00000439406 PCDHB13Q9Y5F0 798 aa10.79□□□□□ -0.68
HCG20-208ENST00000439406 NPHP3Q7Z494 1330 aa10.79□□□□□ -0.68
HCG20-208ENST00000439406 LRP5O75197 1615 aa10.78□□□□□ -0.68
HCG20-208ENST00000439406 PRR29P0C7W0 189 aa10.78□□□□□ -0.68
HCG20-208ENST00000439406 COL22A1Q8NFW1 1626 aaPredicted RBP10.77□□□□□ -0.68
HCG20-208ENST00000439406 EFCAB3Q8N7B9 438 aa10.77□□□□□ -0.69
HCG20-208ENST00000439406 LRPPRCP42704 1394 aaKnown RBP10.77□□□□□ -0.69
HCG20-208ENST00000439406 MYOM2P54296 1465 aa10.76□□□□□ -0.69
HCG20-208ENST00000439406 SPDYE16A6NNV3 312 aaPredicted RBP10.76□□□□□ -0.69
HCG20-208ENST00000439406 KCNA1Q09470 495 aa10.76□□□□□ -0.69
HCG20-208ENST00000439406 FAM50AQ14320 339 aaKnown RBP10.76□□□□□ -0.69
HCG20-208ENST00000439406 ESCO1Q5FWF5 840 aa10.76□□□□□ -0.69
HCG20-208ENST00000439406 SEPT12Q8IYM1 358 aa10.76□□□□□ -0.69
HCG20-208ENST00000439406 NRXN3Q9Y4C0 1643 aa10.76□□□□□ -0.69
HCG20-208ENST00000439406 E9PCH4 1651 aa10.76□□□□□ -0.69
HCG20-208ENST00000439406 BAG6P46379 1132 aa10.75□□□□□ -0.69
HCG20-208ENST00000439406 SH3D19Q5HYK7 790 aa10.75□□□□□ -0.69
HCG20-208ENST00000439406 ZNF330Q9Y3S2 320 aaPredicted RBP10.75□□□□□ -0.69
HCG20-208ENST00000439406 NUP155O75694 1391 aa10.75□□□□□ -0.69
HCG20-208ENST00000439406 FOXO3O43524 673 aa10.74□□□□□ -0.69
HCG20-208ENST00000439406 VPS72Q15906 364 aa10.74□□□□□ -0.69
HCG20-208ENST00000439406 KRT27Q7Z3Y8 459 aa10.74□□□□□ -0.69
HCG20-208ENST00000439406 RALGAPBQ86X10 1494 aa10.74□□□□□ -0.69
HCG20-208ENST00000439406 IQGAP3Q86VI3 1631 aa10.73□□□□□ -0.69
HCG20-208ENST00000439406 NALCNQ8IZF0 1738 aa10.73□□□□□ -0.69
HCG20-208ENST00000439406 SLIT2O94813 1529 aa10.73□□□□□ -0.69
HCG20-208ENST00000439406 SPHKAPQ2M3C7 1700 aa10.72□□□□□ -0.69
HCG20-208ENST00000439406 MARF1Q9Y4F3 1742 aaKnown RBP10.72□□□□□ -0.69
HCG20-208ENST00000439406 NUTM2FA1L443 756 aa10.72□□□□□ -0.69
HCG20-208ENST00000439406 PSDA5PKW4 1024 aaPredicted RBP10.72□□□□□ -0.69
HCG20-208ENST00000439406 ROCK1Q13464 1354 aa10.72□□□□□ -0.69
HCG20-208ENST00000439406 HFM1A2PYH4 1435 aa10.72□□□□□ -0.69
HCG20-208ENST00000439406 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.72□□□□□ -0.69
HCG20-208ENST00000439406 ROBO2Q9HCK4 1378 aa10.71□□□□□ -0.69
HCG20-208ENST00000439406 PRAG1Q86YV5 1406 aa10.7□□□□□ -0.7
HCG20-208ENST00000439406 RPGRIP1LQ68CZ1 1315 aa10.7□□□□□ -0.7
HCG20-208ENST00000439406 GNPATO15228 680 aa10.7□□□□□ -0.7
HCG20-208ENST00000439406 BRD1O95696 1058 aa10.7□□□□□ -0.7
HCG20-208ENST00000439406 MS4A1P11836 297 aa10.7□□□□□ -0.7
HCG20-208ENST00000439406 YY1P25490 414 aa10.7□□□□□ -0.7
HCG20-208ENST00000439406 GIGYF2Q6Y7W6 1299 aaKnown RBP10.7□□□□□ -0.7
HCG20-208ENST00000439406 ZNF579Q8NAF0 562 aaKnown RBP10.7□□□□□ -0.7
HCG20-208ENST00000439406 PCGF6Q9BYE7 350 aa10.7□□□□□ -0.7
HCG20-208ENST00000439406 CABP2Q9NPB3 220 aa10.7□□□□□ -0.7
HCG20-208ENST00000439406 COG6Q9Y2V7 657 aa10.7□□□□□ -0.7
HCG20-208ENST00000439406 GLI3P10071 1580 aa10.69□□□□□ -0.7
HCG20-208ENST00000439406 PXDNQ92626 1479 aa10.69□□□□□ -0.7
HCG20-208ENST00000439406 SPATA31A3Q5VYP0 1347 aa10.69□□□□□ -0.7
HCG20-208ENST00000439406 SPDYE5A6NIY4 337 aa10.69□□□□□ -0.7
HCG20-208ENST00000439406 DPYSL4O14531 572 aa10.69□□□□□ -0.7
HCG20-208ENST00000439406 PDIA6Q15084 440 aa10.69□□□□□ -0.7
HCG20-208ENST00000439406 CCDC27Q2M243 656 aa10.69□□□□□ -0.7
HCG20-208ENST00000439406 PPARGC1BQ86YN6 1023 aaKnown RBP10.69□□□□□ -0.7
HCG20-208ENST00000439406 CLEC11AQ9Y240 323 aa10.69□□□□□ -0.7
HCG20-208ENST00000439406 BRWD3Q6RI45 1802 aa10.68□□□□□ -0.7
HCG20-208ENST00000439406 XPCQ01831 940 aaPredicted RBP10.68□□□□□ -0.7
HCG20-208ENST00000439406 PSME1Q06323 249 aa10.68□□□□□ -0.7
HCG20-208ENST00000439406 EN1Q05925 392 aaPredicted RBP10.67□□□□□ -0.7
HCG20-208ENST00000439406 SKIV2LQ15477 1246 aaKnown RBP10.67□□□□□ -0.7
HCG20-208ENST00000439406 KRT28Q7Z3Y7 464 aa10.67□□□□□ -0.7
HCG20-208ENST00000439406 TSPYL2Q9H2G4 693 aaPredicted RBP10.67□□□□□ -0.7
HCG20-208ENST00000439406 R3HDM1Q15032 1099 aaKnown RBP10.66□□□□□ -0.7
HCG20-208ENST00000439406 NEXMIFQ5QGS0 1516 aa10.66□□□□□ -0.7
HCG20-208ENST00000439406 HIC1Q14526 733 aa10.65□□□□□ -0.7
HCG20-208ENST00000439406 PPP1R15BQ5SWA1 713 aa10.65□□□□□ -0.7
HCG20-208ENST00000439406 WWC1Q8IX03 1113 aa10.64□□□□□ -0.71
HCG20-208ENST00000439406 A0A0G2JS52 829 aa10.63□□□□□ -0.71
HCG20-208ENST00000439406 FAM83GA6ND36 823 aa10.63□□□□□ -0.71
HCG20-208ENST00000439406 CALR3Q96L12 384 aaKnown RBP10.63□□□□□ -0.71
HCG20-208ENST00000439406 CHMP4AQ9BY43 222 aa10.63□□□□□ -0.71
HCG20-208ENST00000439406 CCDC144AA2RUR9 1427 aa10.63□□□□□ -0.71
HCG20-208ENST00000439406 DISP2A7MBM2 1401 aa10.63□□□□□ -0.71
HCG20-208ENST00000439406 CDC42BPGQ6DT37 1551 aa10.63□□□□□ -0.71
HCG20-208ENST00000439406 FAM98CQ17RN3 349 aaKnown RBP10.62□□□□□ -0.71
HCG20-208ENST00000439406 OXER1Q8TDS5 423 aa10.62□□□□□ -0.71
HCG20-208ENST00000439406 SIRT1Q96EB6 747 aa10.62□□□□□ -0.71
HCG20-208ENST00000439406 CAMKK2Q96RR4 588 aa10.62□□□□□ -0.71
HCG20-208ENST00000439406 USTQ9Y2C2 406 aa10.62□□□□□ -0.71
HCG20-208ENST00000439406 NWD2Q9ULI1 1742 aa10.61□□□□□ -0.71
HCG20-208ENST00000439406 KIF1BO60333 1816 aa10.61□□□□□ -0.71
HCG20-208ENST00000439406 NAIPQ13075 1403 aa10.61□□□□□ -0.71
HCG20-208ENST00000439406 FCHSD2O94868 740 aa10.61□□□□□ -0.71
HCG20-208ENST00000439406 CENPBP07199 599 aaPredicted RBP10.61□□□□□ -0.71
HCG20-208ENST00000439406 WAPLQ7Z5K2 1190 aa10.61□□□□□ -0.71
HCG20-208ENST00000439406 CABLES1Q8TDN4 633 aa10.61□□□□□ -0.71
HCG20-208ENST00000439406 USP32Q8NFA0 1604 aa10.61□□□□□ -0.71
HCG20-208ENST00000439406 EZH2Q15910 746 aaKnown RBP10.6□□□□□ -0.71
HCG20-208ENST00000439406 NBPF8Q3BBV2 869 aa10.6□□□□□ -0.71
HCG20-208ENST00000439406 NBPF14Q5TI25 921 aa10.6□□□□□ -0.71
HCG20-208ENST00000439406 FAM196AQ6ZSG2 479 aa10.6□□□□□ -0.71
HCG20-208ENST00000439406 FAM177A1Q8N128 213 aaPredicted RBP10.6□□□□□ -0.71
HCG20-208ENST00000439406 SBNO1A3KN83 1393 aa10.6□□□□□ -0.71
HCG20-208ENST00000439406 ARHGEF10O15013 1369 aa10.6□□□□□ -0.71
HCG20-208ENST00000439406 PARD3Q8TEW0 1356 aa10.6□□□□□ -0.71
HCG20-208ENST00000439406 ABCC11Q96J66 1382 aa10.6□□□□□ -0.71
HCG20-208ENST00000439406 CSB-PGBD3P0DP91 1061 aa10.59□□□□□ -0.71
HCG20-208ENST00000439406 FECHP22830 423 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms