RNA–Protein interactions for RNA: ENST00000438618.2

LINC00271-203, long intergenic non-protein coding RNA 271, humanhuman

TSL 3 BASIC

Gene LINC00271, Length 1,202 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-203ENST00000438618 VPS8Q8N3P4 1428 aa11.22□□□□□ -0.61
LINC00271-203ENST00000438618 REREQ9P2R6 1566 aa11.22□□□□□ -0.61
LINC00271-203ENST00000438618 NCOA2Q15596 1464 aa11.21□□□□□ -0.61
LINC00271-203ENST00000438618 SLC27A5Q9Y2P5 690 aa11.21□□□□□ -0.61
LINC00271-203ENST00000438618 A2MP01023 1474 aa11.2□□□□□ -0.62
LINC00271-203ENST00000438618 MBD5Q9P267 1494 aa11.2□□□□□ -0.62
LINC00271-203ENST00000438618 CNTLNQ9NXG0 1405 aa11.2□□□□□ -0.62
LINC00271-203ENST00000438618 KIF3BO15066 747 aa11.2□□□□□ -0.62
LINC00271-203ENST00000438618 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.2□□□□□ -0.62
LINC00271-203ENST00000438618 CCDC102AQ96A19 550 aa11.2□□□□□ -0.62
LINC00271-203ENST00000438618 TIAM1Q13009 1591 aa11.2□□□□□ -0.62
LINC00271-203ENST00000438618 SETD1BQ9UPS6 1966 aaKnown RBP11.19□□□□□ -0.62
LINC00271-203ENST00000438618 UHRF1BP1Q6BDS2 1440 aa11.19□□□□□ -0.62
LINC00271-203ENST00000438618 SPRYD7Q5W111 196 aa11.19□□□□□ -0.62
LINC00271-203ENST00000438618 LMOD2Q6P5Q4 547 aa11.19□□□□□ -0.62
LINC00271-203ENST00000438618 TRAF7Q6Q0C0 670 aa11.19□□□□□ -0.62
LINC00271-203ENST00000438618 SPATA31D1Q6ZQQ2 1576 aa11.19□□□□□ -0.62
LINC00271-203ENST00000438618 ATP7AQ04656 1500 aa11.19□□□□□ -0.62
LINC00271-203ENST00000438618 LRRC9Q6ZRR7 1453 aa11.19□□□□□ -0.62
LINC00271-203ENST00000438618 RTEL1-TNFRSF6BF6WH68 1400 aa11.18□□□□□ -0.62
LINC00271-203ENST00000438618 DHX29Q7Z478 1369 aaKnown RBP11.18□□□□□ -0.62
LINC00271-203ENST00000438618 ZNF598Q86UK7 904 aaKnown RBP11.18□□□□□ -0.62
LINC00271-203ENST00000438618 SUPT6HQ7KZ85 1726 aaKnown RBP11.18□□□□□ -0.62
LINC00271-203ENST00000438618 CD46P15529 392 aa11.17□□□□□ -0.62
LINC00271-203ENST00000438618 ZNF697Q5TEC3 545 aa11.17□□□□□ -0.62
LINC00271-203ENST00000438618 LIAT1Q6ZQX7 453 aa11.17□□□□□ -0.62
LINC00271-203ENST00000438618 Q3C1V9 767 aa11.16□□□□□ -0.62
LINC00271-203ENST00000438618 WASHC2CQ9Y4E1 1318 aa11.15□□□□□ -0.62
LINC00271-203ENST00000438618 KDM4AO75164 1064 aa11.15□□□□□ -0.62
LINC00271-203ENST00000438618 CLCN1P35523 988 aa11.15□□□□□ -0.62
LINC00271-203ENST00000438618 EMID1Q96A84 441 aaPredicted RBP11.15□□□□□ -0.62
LINC00271-203ENST00000438618 C3P01024 1663 aa11.14□□□□□ -0.63
LINC00271-203ENST00000438618 PREX1Q8TCU6 1659 aa11.14□□□□□ -0.63
LINC00271-203ENST00000438618 CAMSAP2Q08AD1 1489 aa11.14□□□□□ -0.63
LINC00271-203ENST00000438618 THAP11Q96EK4 314 aa11.14□□□□□ -0.63
LINC00271-203ENST00000438618 GPCPD1Q9NPB8 672 aa11.14□□□□□ -0.63
LINC00271-203ENST00000438618 CCDC141Q6ZP82 1450 aa11.13□□□□□ -0.63
LINC00271-203ENST00000438618 INO80Q9ULG1 1556 aaPredicted RBP11.13□□□□□ -0.63
LINC00271-203ENST00000438618 FBXO31Q5XUX0 539 aaPredicted RBP11.13□□□□□ -0.63
LINC00271-203ENST00000438618 FCF1Q9Y324 198 aaKnown RBP11.13□□□□□ -0.63
LINC00271-203ENST00000438618 SALL2Q9Y467 1007 aaPredicted RBP11.13□□□□□ -0.63
LINC00271-203ENST00000438618 MAP3K1Q13233 1512 aa11.13□□□□□ -0.63
LINC00271-203ENST00000438618 NPATQ14207 1427 aa11.12□□□□□ -0.63
LINC00271-203ENST00000438618 PLA2G2CQ5R387 149 aa11.12□□□□□ -0.63
LINC00271-203ENST00000438618 BRICD5Q6PL45 260 aa11.12□□□□□ -0.63
LINC00271-203ENST00000438618 ADGBQ8N7X0 1667 aa11.11□□□□□ -0.63
LINC00271-203ENST00000438618 USP46P62068 366 aa11.11□□□□□ -0.63
LINC00271-203ENST00000438618 PKDCCQ504Y2 493 aa11.11□□□□□ -0.63
LINC00271-203ENST00000438618 RNF19BQ6ZMZ0 732 aa11.11□□□□□ -0.63
LINC00271-203ENST00000438618 FAM160A2Q8N612 972 aaPredicted RBP11.11□□□□□ -0.63
LINC00271-203ENST00000438618 PRDM9Q9NQV7 894 aa11.11□□□□□ -0.63
LINC00271-203ENST00000438618 PLXNC1O60486 1568 aa11.11□□□□□ -0.63
LINC00271-203ENST00000438618 MIA2Q96PC5 1412 aa11.1□□□□□ -0.63
LINC00271-203ENST00000438618 TNFRSF10AO00220 468 aa11.1□□□□□ -0.63
LINC00271-203ENST00000438618 ZBTB24O43167 697 aaPredicted RBP11.1□□□□□ -0.63
LINC00271-203ENST00000438618 NUTM1Q86Y26 1132 aa11.1□□□□□ -0.63
LINC00271-203ENST00000438618 RRP7BPQ9NSQ0 103 aa11.1□□□□□ -0.63
LINC00271-203ENST00000438618 CLTCQ00610 1675 aaKnown RBP11.1□□□□□ -0.63
LINC00271-203ENST00000438618 PTPRKQ15262 1439 aa11.09□□□□□ -0.63
LINC00271-203ENST00000438618 MYOM3Q5VTT5 1437 aa11.09□□□□□ -0.63
LINC00271-203ENST00000438618 CD2BP2O95400 341 aaKnown RBP11.09□□□□□ -0.63
LINC00271-203ENST00000438618 FOXC1Q12948 553 aa11.09□□□□□ -0.63
LINC00271-203ENST00000438618 TTLL12Q14166 644 aaPredicted RBP11.08□□□□□ -0.64
LINC00271-203ENST00000438618 MSS51Q4VC12 460 aa11.08□□□□□ -0.64
LINC00271-203ENST00000438618 TRIM67Q6ZTA4 783 aa11.08□□□□□ -0.64
LINC00271-203ENST00000438618 CHIC2Q9UKJ5 165 aa11.08□□□□□ -0.64
LINC00271-203ENST00000438618 PTPRTO14522 1441 aa11.08□□□□□ -0.64
LINC00271-203ENST00000438618 STRCQ7RTU9 1775 aa11.08□□□□□ -0.64
LINC00271-203ENST00000438618 MROH2AA6NES4 1674 aa11.08□□□□□ -0.64
LINC00271-203ENST00000438618 ARHGEF5Q12774 1597 aa11.07□□□□□ -0.64
LINC00271-203ENST00000438618 RPIAP49247 311 aa11.07□□□□□ -0.64
LINC00271-203ENST00000438618 PRR20EP86478 221 aa11.07□□□□□ -0.64
LINC00271-203ENST00000438618 PRR20CP86479 221 aa11.07□□□□□ -0.64
LINC00271-203ENST00000438618 PRR20DP86480 221 aa11.07□□□□□ -0.64
LINC00271-203ENST00000438618 PRR20BP86481 221 aa11.07□□□□□ -0.64
LINC00271-203ENST00000438618 PRR20AP86496 221 aa11.07□□□□□ -0.64
LINC00271-203ENST00000438618 FAM217BQ9NTX9 383 aaPredicted RBP11.07□□□□□ -0.64
LINC00271-203ENST00000438618 FAM187AA6NFU0 413 aa11.06□□□□□ -0.64
LINC00271-203ENST00000438618 THEMISQ8N1K5 641 aaPredicted RBP11.06□□□□□ -0.64
LINC00271-203ENST00000438618 USB1Q9BQ65 265 aaKnown RBP11.06□□□□□ -0.64
LINC00271-203ENST00000438618 NCOA1Q15788 1441 aa11.06□□□□□ -0.64
LINC00271-203ENST00000438618 TNRQ92752 1358 aa11.05□□□□□ -0.64
LINC00271-203ENST00000438618 HOXA2O43364 376 aa11.05□□□□□ -0.64
LINC00271-203ENST00000438618 BARGINQ6ZT62 677 aa11.05□□□□□ -0.64
LINC00271-203ENST00000438618 ZC3H15Q8WU90 426 aaKnown RBP11.05□□□□□ -0.64
LINC00271-203ENST00000438618 CAMSAP1Q5T5Y3 1602 aa11.05□□□□□ -0.64
LINC00271-203ENST00000438618 LCE2BO14633 110 aa11.04□□□□□ -0.64
LINC00271-203ENST00000438618 FAM50AQ14320 339 aaKnown RBP11.04□□□□□ -0.64
LINC00271-203ENST00000438618 ANKLE2Q86XL3 938 aa11.04□□□□□ -0.64
LINC00271-203ENST00000438618 HLA-CQ95604 372 aa11.04□□□□□ -0.64
LINC00271-203ENST00000438618 ABCC5O15440 1437 aa11.03□□□□□ -0.64
LINC00271-203ENST00000438618 GDF9O60383 454 aa11.03□□□□□ -0.64
LINC00271-203ENST00000438618 ZMYND10O75800 440 aa11.03□□□□□ -0.64
LINC00271-203ENST00000438618 DGAT1O75907 488 aa11.03□□□□□ -0.64
LINC00271-203ENST00000438618 SSTR3P32745 418 aaPredicted RBP11.02□□□□□ -0.65
LINC00271-203ENST00000438618 GUCA2AQ02747 115 aa11.02□□□□□ -0.65
LINC00271-203ENST00000438618 CCDC24Q8N4L8 307 aa11.02□□□□□ -0.65
LINC00271-203ENST00000438618 KIF15Q9NS87 1388 aa11.02□□□□□ -0.65
LINC00271-203ENST00000438618 KDM5DQ9BY66 1539 aa11.01□□□□□ -0.65
LINC00271-203ENST00000438618 ZNF335Q9H4Z2 1342 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms