RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 DDB1Q16531 1140 aa17.43■□□□□ 0.38
RTN4-211ENST00000438462 ACIN1Q9UKV3 1341 aaKnown RBP17.42■□□□□ 0.38
RTN4-211ENST00000438462 NHSQ6T4R5 1651 aa17.42■□□□□ 0.38
RTN4-211ENST00000438462 ABCC11Q96J66 1382 aa17.41■□□□□ 0.38
RTN4-211ENST00000438462 ANKARQ7Z5J8 1434 aa17.41■□□□□ 0.38
RTN4-211ENST00000438462 RBM46Q8TBY0 533 aaKnown RBP17.41■□□□□ 0.38
RTN4-211ENST00000438462 COL5A2P05997 1499 aaPredicted RBP17.4■□□□□ 0.38
RTN4-211ENST00000438462 PAK3O75914 559 aaPredicted RBP17.4■□□□□ 0.38
RTN4-211ENST00000438462 MARCH10Q8NA82 808 aaPredicted RBP17.4■□□□□ 0.38
RTN4-211ENST00000438462 NMRK2Q9NPI5 230 aa17.39■□□□□ 0.37
RTN4-211ENST00000438462 PNPLA7Q6ZV29 1317 aa17.38■□□□□ 0.37
RTN4-211ENST00000438462 CRB1P82279 1406 aa17.38■□□□□ 0.37
RTN4-211ENST00000438462 MLLT1Q03111 559 aaPredicted RBP17.37■□□□□ 0.37
RTN4-211ENST00000438462 CICQ96RK0 1608 aaPredicted RBP17.36■□□□□ 0.37
RTN4-211ENST00000438462 FSTL1Q12841 308 aa17.35■□□□□ 0.37
RTN4-211ENST00000438462 USP19O94966 1318 aa17.35■□□□□ 0.37
RTN4-211ENST00000438462 VPS8Q8N3P4 1428 aa17.35■□□□□ 0.37
RTN4-211ENST00000438462 BTAF1O14981 1849 aa17.34■□□□□ 0.37
RTN4-211ENST00000438462 YTHDC2Q9H6S0 1430 aaKnown RBP17.33■□□□□ 0.36
RTN4-211ENST00000438462 RPGRIP1LQ68CZ1 1315 aa17.33■□□□□ 0.36
RTN4-211ENST00000438462 TMEM132EQ6IEE7 984 aa17.33■□□□□ 0.36
RTN4-211ENST00000438462 C16orf71Q8IYS4 520 aaPredicted RBP17.33■□□□□ 0.36
RTN4-211ENST00000438462 AKT1S1Q96B36 256 aa17.33■□□□□ 0.36
RTN4-211ENST00000438462 LRRC4BQ9NT99 713 aa17.31■□□□□ 0.36
RTN4-211ENST00000438462 CPDO75976 1380 aa17.3■□□□□ 0.36
RTN4-211ENST00000438462 NUTM2GQ5VZR2 741 aa17.3■□□□□ 0.36
RTN4-211ENST00000438462 BRD4O60885 1362 aaPredicted RBP17.28■□□□□ 0.36
RTN4-211ENST00000438462 ANKRD30BQ9BXX2 1392 aa17.28■□□□□ 0.36
RTN4-211ENST00000438462 ADGRF5Q8IZF2 1346 aa17.28■□□□□ 0.36
RTN4-211ENST00000438462 SAFB2Q14151 953 aaKnown RBP eCLIP17.28■□□□□ 0.368e-8■■■□□ 19.2
RTN4-211ENST00000438462 CD2APQ9Y5K6 639 aa17.28■□□□□ 0.36
RTN4-211ENST00000438462 PIK3C2AO00443 1686 aa17.28■□□□□ 0.36
RTN4-211ENST00000438462 ABHD8Q96I13 439 aa17.27■□□□□ 0.36
RTN4-211ENST00000438462 TRPM1Q7Z4N2 1603 aa17.27■□□□□ 0.36
RTN4-211ENST00000438462 NGDNQ8NEJ9 315 aaKnown RBP17.26■□□□□ 0.35
RTN4-211ENST00000438462 TFCP2L1Q9NZI6 479 aa17.26■□□□□ 0.35
RTN4-211ENST00000438462 IGSF1Q8N6C5 1336 aa17.25■□□□□ 0.35
RTN4-211ENST00000438462 PRR36Q9H6K5 1346 aa17.25■□□□□ 0.35
RTN4-211ENST00000438462 PRDM10Q9NQV6 1147 aa17.25■□□□□ 0.35
RTN4-211ENST00000438462 FOXN1O15353 648 aa17.24■□□□□ 0.35
RTN4-211ENST00000438462 FAM50AQ14320 339 aaKnown RBP17.24■□□□□ 0.35
RTN4-211ENST00000438462 MSL1Q68DK7 614 aa17.24■□□□□ 0.35
RTN4-211ENST00000438462 ACSBG1Q96GR2 724 aa17.24■□□□□ 0.35
RTN4-211ENST00000438462 SIRT1Q96EB6 747 aa17.23■□□□□ 0.35
RTN4-211ENST00000438462 HIRIP3Q9BW71 556 aaPredicted RBP17.22■□□□□ 0.35
RTN4-211ENST00000438462 ITSN1Q15811 1721 aa17.21■□□□□ 0.35
RTN4-211ENST00000438462 RGS19P49795 217 aa17.21■□□□□ 0.35
RTN4-211ENST00000438462 TOM1L2Q6ZVM7 507 aa17.21■□□□□ 0.35
RTN4-211ENST00000438462 USP6P35125 1406 aa17.21■□□□□ 0.34
RTN4-211ENST00000438462 TNRC6CQ9HCJ0 1690 aaKnown RBP17.2■□□□□ 0.34
RTN4-211ENST00000438462 PRAM1Q96QH2 718 aa17.2■□□□□ 0.34
RTN4-211ENST00000438462 PKD1L3Q7Z443 1732 aa17.2■□□□□ 0.34
RTN4-211ENST00000438462 C10orf71Q711Q0 1435 aa17.2■□□□□ 0.34
RTN4-211ENST00000438462 MSH5O43196 834 aa17.19■□□□□ 0.34
RTN4-211ENST00000438462 SMC1BQ8NDV3 1235 aa17.19■□□□□ 0.34
RTN4-211ENST00000438462 CDCA7Q9BWT1 371 aaPredicted RBP17.19■□□□□ 0.34
RTN4-211ENST00000438462 PIK3C2GO75747 1445 aa17.19■□□□□ 0.34
RTN4-211ENST00000438462 ROCK1Q13464 1354 aa17.18■□□□□ 0.34
RTN4-211ENST00000438462 EIF3AQ14152 1382 aaKnown RBP17.18■□□□□ 0.34
RTN4-211ENST00000438462 TNRC18O15417 2968 aaPredicted RBP17.18■□□□□ 0.34
RTN4-211ENST00000438462 KCPQ6ZWJ8 1503 aa17.18■□□□□ 0.34
RTN4-211ENST00000438462 ABCC6O95255 1503 aa17.16■□□□□ 0.34
RTN4-211ENST00000438462 ZBTB7CA1YPR0 619 aa17.15■□□□□ 0.34
RTN4-211ENST00000438462 CCDC85CA6NKD9 419 aa17.15■□□□□ 0.34
RTN4-211ENST00000438462 SLC27A3Q5K4L6 730 aa17.15■□□□□ 0.34
RTN4-211ENST00000438462 PXDNLA1KZ92 1463 aa17.15■□□□□ 0.34
RTN4-211ENST00000438462 KCNQ4P56696 695 aa17.14■□□□□ 0.33
RTN4-211ENST00000438462 PLEKHG2Q9H7P9 1386 aa17.14■□□□□ 0.33
RTN4-211ENST00000438462 EXOC5O00471 708 aa17.13■□□□□ 0.33
RTN4-211ENST00000438462 CTCFP49711 727 aaPredicted RBP17.13■□□□□ 0.33
RTN4-211ENST00000438462 COL23A1Q86Y22 540 aaPredicted RBP17.13■□□□□ 0.33
RTN4-211ENST00000438462 WDR17Q8IZU2 1322 aa17.12■□□□□ 0.33
RTN4-211ENST00000438462 COL18A1P39060 1754 aa17.12■□□□□ 0.33
RTN4-211ENST00000438462 LY75O60449 1722 aa17.11■□□□□ 0.33
RTN4-211ENST00000438462 QRICH2Q9H0J4 1663 aa17.1■□□□□ 0.33
RTN4-211ENST00000438462 RRAGCQ9HB90 399 aa17.1■□□□□ 0.33
RTN4-211ENST00000438462 POGKQ9P215 609 aa17.1■□□□□ 0.33
RTN4-211ENST00000438462 GCP02774 474 aa17.09■□□□□ 0.33
RTN4-211ENST00000438462 ABTB2Q8N961 1025 aa17.09■□□□□ 0.33
RTN4-211ENST00000438462 KDM2BQ8NHM5 1336 aa17.09■□□□□ 0.33
RTN4-211ENST00000438462 KAT6BQ8WYB5 2073 aa17.09■□□□□ 0.33
RTN4-211ENST00000438462 LBX1P52954 281 aa17.08■□□□□ 0.32
RTN4-211ENST00000438462 AIDAQ96BJ3 306 aa17.08■□□□□ 0.32
RTN4-211ENST00000438462 MKRN1Q9UHC7 482 aaKnown RBP17.08■□□□□ 0.32
RTN4-211ENST00000438462 RGPD5Q99666 1765 aa17.07■□□□□ 0.32
RTN4-211ENST00000438462 MINK1Q8N4C8 1332 aaPredicted RBP17.07■□□□□ 0.32
RTN4-211ENST00000438462 KIAA1551Q9HCM1 1747 aa17.07■□□□□ 0.32
RTN4-211ENST00000438462 USP54Q70EL1 1684 aa17.07■□□□□ 0.32
RTN4-211ENST00000438462 PDE4DIPQ5VU43 2346 aa17.05■□□□□ 0.32
RTN4-211ENST00000438462 PPIP5K1Q6PFW1 1433 aa17.04■□□□□ 0.32
RTN4-211ENST00000438462 WASLO00401 505 aaPredicted RBP17.04■□□□□ 0.32
RTN4-211ENST00000438462 C9orf131Q5VYM1 1079 aa17.04■□□□□ 0.32
RTN4-211ENST00000438462 N4BP2Q86UW6 1770 aaPredicted RBP17.04■□□□□ 0.32
RTN4-211ENST00000438462 ARHGAP27Q6ZUM4 889 aa17.03■□□□□ 0.32
RTN4-211ENST00000438462 CARD10Q9BWT7 1032 aa17.03■□□□□ 0.32
RTN4-211ENST00000438462 AXIN2Q9Y2T1 843 aa17.02■□□□□ 0.32
RTN4-211ENST00000438462 POLR3AO14802 1390 aaPredicted RBP17.02■□□□□ 0.31
RTN4-211ENST00000438462 SLIT3O75094 1523 aa17.01■□□□□ 0.31
RTN4-211ENST00000438462 RGL3Q3MIN7 710 aa17.01■□□□□ 0.31
RTN4-211ENST00000438462 NLRP13Q86W25 1043 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms