RNA–Protein interactions for RNA: ENST00000438045.5

PEX1-204, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 2 BASIC

Gene PEX1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-204ENST00000438045 NFE2L2Q16236 605 aa17.23■□□□□ 0.35
PEX1-204ENST00000438045 FTSJ3Q8IY81 847 aaKnown RBP17.22■□□□□ 0.35
PEX1-204ENST00000438045 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.22■□□□□ 0.35
PEX1-204ENST00000438045 ADAMTSL3P82987 1691 aa17.22■□□□□ 0.35
PEX1-204ENST00000438045 NPM2Q86SE8 214 aaKnown RBP17.21■□□□□ 0.35
PEX1-204ENST00000438045 RLBP1P12271 317 aa17.21■□□□□ 0.35
PEX1-204ENST00000438045 HOXC9P31274 260 aa17.21■□□□□ 0.34
PEX1-204ENST00000438045 CDC42BPGQ6DT37 1551 aa17.2■□□□□ 0.34
PEX1-204ENST00000438045 RARSP54136 660 aaKnown RBP17.2■□□□□ 0.34
PEX1-204ENST00000438045 MTHFSDQ2M296 383 aaKnown RBP17.2■□□□□ 0.34
PEX1-204ENST00000438045 PTCH1Q13635 1447 aa17.2■□□□□ 0.34
PEX1-204ENST00000438045 GCP02774 474 aa17.19■□□□□ 0.34
PEX1-204ENST00000438045 SSH1Q8WYL5 1049 aa17.19■□□□□ 0.34
PEX1-204ENST00000438045 RTF1Q92541 710 aaKnown RBP17.19■□□□□ 0.34
PEX1-204ENST00000438045 NLRP2Q9NX02 1062 aa17.19■□□□□ 0.34
PEX1-204ENST00000438045 A0A0G2JS52 829 aa17.18■□□□□ 0.34
PEX1-204ENST00000438045 ITPRIPQ8IWB1 547 aa17.18■□□□□ 0.34
PEX1-204ENST00000438045 PNNQ9H307 717 aaKnown RBP17.18■□□□□ 0.34
PEX1-204ENST00000438045 MBIPQ9NS73 344 aa17.18■□□□□ 0.34
PEX1-204ENST00000438045 WDR63Q8IWG1 891 aa17.17■□□□□ 0.34
PEX1-204ENST00000438045 TTC21AQ8NDW8 1320 aa17.17■□□□□ 0.34
PEX1-204ENST00000438045 NOB1Q9ULX3 412 aaKnown RBP17.17■□□□□ 0.34
PEX1-204ENST00000438045 MAP2P11137 1827 aaKnown RBP17.16■□□□□ 0.34
PEX1-204ENST00000438045 NBPF6Q5VWK0 638 aa17.16■□□□□ 0.34
PEX1-204ENST00000438045 NBPF4Q96M43 638 aa17.16■□□□□ 0.34
PEX1-204ENST00000438045 AXIN2Q9Y2T1 843 aa17.16■□□□□ 0.34
PEX1-204ENST00000438045 C8orf58Q8NAV2 365 aa17.16■□□□□ 0.34
PEX1-204ENST00000438045 PIP4K2BP78356 416 aa17.16■□□□□ 0.34
PEX1-204ENST00000438045 C1orf115Q9H7X2 142 aa17.15■□□□□ 0.34
PEX1-204ENST00000438045 STRN4Q9NRL3 753 aa17.15■□□□□ 0.34
PEX1-204ENST00000438045 RNF123Q5XPI4 1314 aa17.15■□□□□ 0.34
PEX1-204ENST00000438045 ADGRL3Q9HAR2 1447 aa17.14■□□□□ 0.34
PEX1-204ENST00000438045 SHPRHQ149N8 1683 aa17.14■□□□□ 0.33
PEX1-204ENST00000438045 TRMT2AQ8IZ69 625 aaKnown RBP17.14■□□□□ 0.33
PEX1-204ENST00000438045 COL3A1P02461 1466 aaPredicted RBP17.14■□□□□ 0.33
PEX1-204ENST00000438045 PNPLA6Q8IY17 1366 aa17.14■□□□□ 0.33
PEX1-204ENST00000438045 MPRIPQ6WCQ1 1025 aa17.13■□□□□ 0.33
PEX1-204ENST00000438045 LRRC7Q96NW7 1537 aa17.13■□□□□ 0.33
PEX1-204ENST00000438045 RBM19Q9Y4C8 960 aaKnown RBP17.13■□□□□ 0.33
PEX1-204ENST00000438045 INSRP06213 1382 aa17.13■□□□□ 0.33
PEX1-204ENST00000438045 TSPYL4Q9UJ04 414 aa17.12■□□□□ 0.33
PEX1-204ENST00000438045 FLT4P35916 1363 aa17.12■□□□□ 0.33
PEX1-204ENST00000438045 OVOS2A0A0J9YW53 1432 aa17.12■□□□□ 0.33
PEX1-204ENST00000438045 OVOS2Q6IE36 1432 aa17.12■□□□□ 0.33
PEX1-204ENST00000438045 ANKRD24Q8TF21 1146 aa17.12■□□□□ 0.33
PEX1-204ENST00000438045 PIK3R4Q99570 1358 aa17.12■□□□□ 0.33
PEX1-204ENST00000438045 TWISTNBQ3B726 338 aaPredicted RBP17.11■□□□□ 0.33
PEX1-204ENST00000438045 CADPS2Q86UW7 1296 aa17.11■□□□□ 0.33
PEX1-204ENST00000438045 USP32Q8NFA0 1604 aa17.11■□□□□ 0.33
PEX1-204ENST00000438045 MSH6P52701 1360 aa17.11■□□□□ 0.33
PEX1-204ENST00000438045 EIF2S2P20042 333 aaKnown RBP17.11■□□□□ 0.33
PEX1-204ENST00000438045 SLC4A10Q6U841 1118 aa17.1■□□□□ 0.33
PEX1-204ENST00000438045 KIF20BQ96Q89 1820 aa17.09■□□□□ 0.33
PEX1-204ENST00000438045 AATKQ6ZMQ8 1374 aa17.09■□□□□ 0.33
PEX1-204ENST00000438045 APBB1O00213 710 aa17.09■□□□□ 0.33
PEX1-204ENST00000438045 LGR6Q9HBX8 967 aa17.09■□□□□ 0.33
PEX1-204ENST00000438045 SLAIN2Q9P270 581 aa17.09■□□□□ 0.33
PEX1-204ENST00000438045 TRIM27P14373 513 aa17.08■□□□□ 0.33
PEX1-204ENST00000438045 ITSN1Q15811 1721 aa17.08■□□□□ 0.33
PEX1-204ENST00000438045 SBNO1A3KN83 1393 aa17.08■□□□□ 0.33
PEX1-204ENST00000438045 ZKSCAN2Q63HK3 967 aa17.08■□□□□ 0.32
PEX1-204ENST00000438045 IGHDP01880 384 aa17.08■□□□□ 0.32
PEX1-204ENST00000438045 ANXA1P04083 346 aa17.08■□□□□ 0.32
PEX1-204ENST00000438045 GNAI1P63096 354 aa17.08■□□□□ 0.32
PEX1-204ENST00000438045 ZNF530Q6P9A1 599 aaPredicted RBP17.08■□□□□ 0.32
PEX1-204ENST00000438045 PHF23Q9BUL5 403 aaPredicted RBP17.08■□□□□ 0.32
PEX1-204ENST00000438045 BRINP3Q76B58 766 aa17.07■□□□□ 0.32
PEX1-204ENST00000438045 CCDC27Q2M243 656 aa17.07■□□□□ 0.32
PEX1-204ENST00000438045 DZIP1LQ8IYY4 767 aaKnown RBP17.07■□□□□ 0.32
PEX1-204ENST00000438045 TMEM57Q8N5G2 664 aa17.07■□□□□ 0.32
PEX1-204ENST00000438045 PRDM11Q9NQV5 511 aa17.07■□□□□ 0.32
PEX1-204ENST00000438045 IQSEC2Q5JU85 1478 aa17.07■□□□□ 0.32
PEX1-204ENST00000438045 KNDC1Q76NI1 1749 aa17.07■□□□□ 0.32
PEX1-204ENST00000438045 C1orf167Q5SNV9 1468 aa17.06■□□□□ 0.32
PEX1-204ENST00000438045 NALCNQ8IZF0 1738 aa17.06■□□□□ 0.32
PEX1-204ENST00000438045 NUTM2BA6NNL0 878 aaPredicted RBP17.06■□□□□ 0.32
PEX1-204ENST00000438045 NUTM2EB1AL46 878 aaPredicted RBP17.06■□□□□ 0.32
PEX1-204ENST00000438045 NUTM2AQ8IVF1 878 aaPredicted RBP17.06■□□□□ 0.32
PEX1-204ENST00000438045 CDK12Q9NYV4 1490 aaPredicted RBP17.05■□□□□ 0.32
PEX1-204ENST00000438045 IP6K1Q92551 441 aa17.05■□□□□ 0.32
PEX1-204ENST00000438045 SSH2Q76I76 1423 aa17.05■□□□□ 0.32
PEX1-204ENST00000438045 XRN1Q8IZH2 1706 aaKnown RBP17.05■□□□□ 0.32
PEX1-204ENST00000438045 F6X3S4 739 aa17.04■□□□□ 0.32
PEX1-204ENST00000438045 KCNQ3O43525 872 aa17.04■□□□□ 0.32
PEX1-204ENST00000438045 ERICH6BQ5W0A0 696 aa17.04■□□□□ 0.32
PEX1-204ENST00000438045 LMOD3Q0VAK6 560 aa17.04■□□□□ 0.32
PEX1-204ENST00000438045 KCNH5Q8NCM2 988 aa17.04■□□□□ 0.32
PEX1-204ENST00000438045 NGEFQ8N5V2 710 aa17.04■□□□□ 0.32
PEX1-204ENST00000438045 ADAMTS2O95450 1211 aa17.03■□□□□ 0.32
PEX1-204ENST00000438045 PCDHB15Q9Y5E8 787 aa17.03■□□□□ 0.32
PEX1-204ENST00000438045 ANKARQ7Z5J8 1434 aa17.03■□□□□ 0.32
PEX1-204ENST00000438045 VAMP4O75379 141 aa17.03■□□□□ 0.32
PEX1-204ENST00000438045 PIP4K2AP48426 406 aaPredicted RBP17.03■□□□□ 0.32
PEX1-204ENST00000438045 CFAP44Q96MT7 982 aa17.03■□□□□ 0.32
PEX1-204ENST00000438045 USP31Q70CQ4 1352 aa17.02■□□□□ 0.32
PEX1-204ENST00000438045 ARHGEF25Q86VW2 580 aa17.02■□□□□ 0.32
PEX1-204ENST00000438045 IL17REQ8NFR9 667 aa17.02■□□□□ 0.32
PEX1-204ENST00000438045 GNAT3A8MTJ3 354 aa17.02■□□□□ 0.31
PEX1-204ENST00000438045 NPHP3Q7Z494 1330 aa17.02■□□□□ 0.31
PEX1-204ENST00000438045 SLC4A2P04920 1241 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms