RNA–Protein interactions for RNA: ENST00000437929.5

TOP3B-208, Transcript of DNA topoisomerase III beta, humanhuman

TSL 4

Gene TOP3B, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-208ENST00000437929 CCDC125Q86Z20 511 aa10.48□□□□□ -0.73
TOP3B-208ENST00000437929 GJD4Q96KN9 370 aaPredicted RBP10.48□□□□□ -0.73
TOP3B-208ENST00000437929 KIF1BO60333 1816 aa10.48□□□□□ -0.73
TOP3B-208ENST00000437929 NUTM2FA1L443 756 aa10.47□□□□□ -0.73
TOP3B-208ENST00000437929 SMYD5Q6GMV2 418 aa10.47□□□□□ -0.73
TOP3B-208ENST00000437929 PXDNQ92626 1479 aa10.47□□□□□ -0.73
TOP3B-208ENST00000437929 FOXO3O43524 673 aa10.46□□□□□ -0.73
TOP3B-208ENST00000437929 NPHP3Q7Z494 1330 aa10.46□□□□□ -0.73
TOP3B-208ENST00000437929 GLI3P10071 1580 aa10.46□□□□□ -0.74
TOP3B-208ENST00000437929 RALGAPBQ86X10 1494 aa10.45□□□□□ -0.74
TOP3B-208ENST00000437929 HFM1A2PYH4 1435 aa10.45□□□□□ -0.74
TOP3B-208ENST00000437929 BLMP54132 1417 aaPredicted RBP10.45□□□□□ -0.74
TOP3B-208ENST00000437929 MAP3K9P80192 1104 aa10.45□□□□□ -0.74
TOP3B-208ENST00000437929 PPARGC1BQ86YN6 1023 aaKnown RBP10.45□□□□□ -0.74
TOP3B-208ENST00000437929 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.45□□□□□ -0.74
TOP3B-208ENST00000437929 CDC42BPGQ6DT37 1551 aa10.44□□□□□ -0.74
TOP3B-208ENST00000437929 UNC5CLQ8IV45 518 aa10.44□□□□□ -0.74
TOP3B-208ENST00000437929 BRWD3Q6RI45 1802 aa10.44□□□□□ -0.74
TOP3B-208ENST00000437929 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.44□□□□□ -0.74
TOP3B-208ENST00000437929 MLLT3P42568 568 aaPredicted RBP10.43□□□□□ -0.74
TOP3B-208ENST00000437929 SLIT2O94813 1529 aa10.43□□□□□ -0.74
TOP3B-208ENST00000437929 NAIPQ13075 1403 aa10.42□□□□□ -0.74
TOP3B-208ENST00000437929 PRAG1Q86YV5 1406 aa10.42□□□□□ -0.74
TOP3B-208ENST00000437929 PSDA5PKW4 1024 aaPredicted RBP10.42□□□□□ -0.74
TOP3B-208ENST00000437929 SPDYE16A6NNV3 312 aaPredicted RBP10.42□□□□□ -0.74
TOP3B-208ENST00000437929 SF3B2Q13435 895 aaKnown RBP10.42□□□□□ -0.74
TOP3B-208ENST00000437929 PDIA6Q15084 440 aa10.42□□□□□ -0.74
TOP3B-208ENST00000437929 PPLO60437 1756 aa10.42□□□□□ -0.74
TOP3B-208ENST00000437929 USP32Q8NFA0 1604 aa10.41□□□□□ -0.74
TOP3B-208ENST00000437929 WAPLQ7Z5K2 1190 aa10.41□□□□□ -0.74
TOP3B-208ENST00000437929 SEPT12Q8IYM1 358 aa10.41□□□□□ -0.74
TOP3B-208ENST00000437929 STK26Q9P289 416 aa10.41□□□□□ -0.74
TOP3B-208ENST00000437929 LRP5O75197 1615 aa10.4□□□□□ -0.74
TOP3B-208ENST00000437929 LRPPRCP42704 1394 aaKnown RBP10.4□□□□□ -0.74
TOP3B-208ENST00000437929 CCDC9Q9Y3X0 531 aaKnown RBP10.4□□□□□ -0.74
TOP3B-208ENST00000437929 PLEKHH1Q9ULM0 1364 aa10.39□□□□□ -0.75
TOP3B-208ENST00000437929 SPATA31A3Q5VYP0 1347 aa10.39□□□□□ -0.75
TOP3B-208ENST00000437929 CABLES1Q8TDN4 633 aa10.39□□□□□ -0.75
TOP3B-208ENST00000437929 RPGRIP1LQ68CZ1 1315 aa10.38□□□□□ -0.75
TOP3B-208ENST00000437929 ADGRF5Q8IZF2 1346 aa10.38□□□□□ -0.75
TOP3B-208ENST00000437929 PLCH1Q4KWH8 1693 aa10.38□□□□□ -0.75
TOP3B-208ENST00000437929 A0A0G2JS52 829 aa10.38□□□□□ -0.75
TOP3B-208ENST00000437929 MYT1Q01538 1121 aa10.38□□□□□ -0.75
TOP3B-208ENST00000437929 OXER1Q8TDS5 423 aa10.38□□□□□ -0.75
TOP3B-208ENST00000437929 CCDC144AA2RUR9 1427 aa10.37□□□□□ -0.75
TOP3B-208ENST00000437929 GRXCR2A6NFK2 248 aa10.37□□□□□ -0.75
TOP3B-208ENST00000437929 TMEM132EQ6IEE7 984 aa10.37□□□□□ -0.75
TOP3B-208ENST00000437929 KRT28Q7Z3Y7 464 aa10.37□□□□□ -0.75
TOP3B-208ENST00000437929 KRT27Q7Z3Y8 459 aa10.37□□□□□ -0.75
TOP3B-208ENST00000437929 FMN2Q9NZ56 1722 aa10.37□□□□□ -0.75
TOP3B-208ENST00000437929 KIF1AQ12756 1690 aa10.37□□□□□ -0.75
TOP3B-208ENST00000437929 TBC1D12O60347 775 aa10.36□□□□□ -0.75
TOP3B-208ENST00000437929 HRCP23327 699 aa10.36□□□□□ -0.75
TOP3B-208ENST00000437929 VPS72Q15906 364 aa10.36□□□□□ -0.75
TOP3B-208ENST00000437929 RBM26Q5T8P6 1007 aaKnown RBP10.36□□□□□ -0.75
TOP3B-208ENST00000437929 ZC3H15Q8WU90 426 aaKnown RBP10.36□□□□□ -0.75
TOP3B-208ENST00000437929 TNS3Q68CZ2 1445 aa10.35□□□□□ -0.75
TOP3B-208ENST00000437929 RRBP1Q9P2E9 1410 aaKnown RBP10.35□□□□□ -0.75
TOP3B-208ENST00000437929 RGPD8O14715 1765 aaPredicted RBP10.35□□□□□ -0.75
TOP3B-208ENST00000437929 BAG6P46379 1132 aa10.35□□□□□ -0.75
TOP3B-208ENST00000437929 RGL3Q3MIN7 710 aa10.35□□□□□ -0.75
TOP3B-208ENST00000437929 ABCA3Q99758 1704 aa10.35□□□□□ -0.75
TOP3B-208ENST00000437929 TECPR2O15040 1411 aa10.34□□□□□ -0.75
TOP3B-208ENST00000437929 KNDC1Q76NI1 1749 aa10.34□□□□□ -0.75
TOP3B-208ENST00000437929 NWD2Q9ULI1 1742 aa10.34□□□□□ -0.75
TOP3B-208ENST00000437929 ZNF316A6NFI3 1004 aaPredicted RBP10.34□□□□□ -0.75
TOP3B-208ENST00000437929 EN1Q05925 392 aaPredicted RBP10.34□□□□□ -0.75
TOP3B-208ENST00000437929 FAM98CQ17RN3 349 aaKnown RBP10.34□□□□□ -0.75
TOP3B-208ENST00000437929 FAM182BQ5T319 152 aa10.34□□□□□ -0.75
TOP3B-208ENST00000437929 IFT172Q9UG01 1749 aa10.33□□□□□ -0.76
TOP3B-208ENST00000437929 ONECUT3O60422 494 aaPredicted RBP10.33□□□□□ -0.76
TOP3B-208ENST00000437929 R3HDM1Q15032 1099 aaKnown RBP10.33□□□□□ -0.76
TOP3B-208ENST00000437929 GPIHBP1Q8IV16 184 aa10.33□□□□□ -0.76
TOP3B-208ENST00000437929 ABCC11Q96J66 1382 aa10.32□□□□□ -0.76
TOP3B-208ENST00000437929 FAM83GA6ND36 823 aa10.32□□□□□ -0.76
TOP3B-208ENST00000437929 EVI5O60447 810 aa10.32□□□□□ -0.76
TOP3B-208ENST00000437929 DDX12PQ92771 950 aa10.32□□□□□ -0.76
TOP3B-208ENST00000437929 NRAPQ86VF7 1730 aa10.32□□□□□ -0.76
TOP3B-208ENST00000437929 YTHDC2Q9H6S0 1430 aaKnown RBP10.32□□□□□ -0.76
TOP3B-208ENST00000437929 POTEB2H3BUK9 544 aa10.31□□□□□ -0.76
TOP3B-208ENST00000437929 POTEJP0CG39 1038 aa10.31□□□□□ -0.76
TOP3B-208ENST00000437929 PSME1Q06323 249 aa10.31□□□□□ -0.76
TOP3B-208ENST00000437929 SAFB2Q14151 953 aaKnown RBP eCLIP10.31□□□□□ -0.76
TOP3B-208ENST00000437929 NRXN1Q9ULB1 1477 aa10.3□□□□□ -0.76
TOP3B-208ENST00000437929 RGPD1P0DJD0 1748 aa10.3□□□□□ -0.76
TOP3B-208ENST00000437929 SLAIN1Q8ND83 568 aa10.3□□□□□ -0.76
TOP3B-208ENST00000437929 PMFBP1Q8TBY8 1022 aa10.3□□□□□ -0.76
TOP3B-208ENST00000437929 PTCD2Q8WV60 388 aaKnown RBP10.3□□□□□ -0.76
TOP3B-208ENST00000437929 SCUBE2Q9NQ36 999 aa10.3□□□□□ -0.76
TOP3B-208ENST00000437929 BTG4Q9NY30 223 aa10.3□□□□□ -0.76
TOP3B-208ENST00000437929 PIK3C2GO75747 1445 aa10.3□□□□□ -0.76
TOP3B-208ENST00000437929 SBNO1A3KN83 1393 aa10.29□□□□□ -0.76
TOP3B-208ENST00000437929 ARHGEF10O15013 1369 aa10.29□□□□□ -0.76
TOP3B-208ENST00000437929 SLC34A2O95436 690 aa10.29□□□□□ -0.76
TOP3B-208ENST00000437929 EZH2Q15910 746 aaKnown RBP10.29□□□□□ -0.76
TOP3B-208ENST00000437929 SPATA31E1Q6ZUB1 1445 aa10.29□□□□□ -0.76
TOP3B-208ENST00000437929 ANKRD30BQ9BXX2 1392 aa10.28□□□□□ -0.76
TOP3B-208ENST00000437929 TNS1Q9HBL0 1735 aaKnown RBP10.28□□□□□ -0.76
TOP3B-208ENST00000437929 PRAM1Q96QH2 718 aa10.27□□□□□ -0.77
TOP3B-208ENST00000437929 COL14A1Q05707 1796 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms