RNA–Protein interactions for RNA: ENST00000437025.6

GABRA1-204, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-204ENST00000437025 IQSEC2Q5JU85 1478 aa13.33□□□□□ -0.27
GABRA1-204ENST00000437025 VAMP4O75379 141 aa13.33□□□□□ -0.28
GABRA1-204ENST00000437025 LMOD3Q0VAK6 560 aa13.33□□□□□ -0.28
GABRA1-204ENST00000437025 HDAC1Q13547 482 aaPredicted RBP13.33□□□□□ -0.28
GABRA1-204ENST00000437025 PPIP5K1Q6PFW1 1433 aa13.33□□□□□ -0.28
GABRA1-204ENST00000437025 RIMS2Q9UQ26 1411 aa13.32□□□□□ -0.28
GABRA1-204ENST00000437025 HDGFP51858 240 aaKnown RBP13.32□□□□□ -0.28
GABRA1-204ENST00000437025 RTF1Q92541 710 aaKnown RBP13.32□□□□□ -0.28
GABRA1-204ENST00000437025 NEXMIFQ5QGS0 1516 aa13.32□□□□□ -0.28
GABRA1-204ENST00000437025 NEO1Q92859 1461 aa13.32□□□□□ -0.28
GABRA1-204ENST00000437025 CAMSAP1Q5T5Y3 1602 aa13.32□□□□□ -0.28
GABRA1-204ENST00000437025 IL16Q14005 1332 aa13.32□□□□□ -0.28
GABRA1-204ENST00000437025 SMC5Q8IY18 1101 aa13.31□□□□□ -0.28
GABRA1-204ENST00000437025 PPLO60437 1756 aa13.31□□□□□ -0.28
GABRA1-204ENST00000437025 AMPHP49418 695 aa13.31□□□□□ -0.28
GABRA1-204ENST00000437025 ALDH1L2Q3SY69 923 aa13.31□□□□□ -0.28
GABRA1-204ENST00000437025 HSP90AB2PQ58FF8 381 aa13.31□□□□□ -0.28
GABRA1-204ENST00000437025 CHMP4BQ9H444 224 aaKnown RBP13.31□□□□□ -0.28
GABRA1-204ENST00000437025 MRPL50Q8N5N7 158 aaKnown RBP13.31□□□□□ -0.28
GABRA1-204ENST00000437025 CHMP5Q9NZZ3 219 aa13.31□□□□□ -0.28
GABRA1-204ENST00000437025 API5Q9BZZ5 524 aaKnown RBP13.3□□□□□ -0.28
GABRA1-204ENST00000437025 SMARCA5O60264 1052 aaPredicted RBP13.3□□□□□ -0.28
GABRA1-204ENST00000437025 NUCB1Q02818 461 aa13.3□□□□□ -0.28
GABRA1-204ENST00000437025 RBM42Q9BTD8 480 aaKnown RBP13.3□□□□□ -0.28
GABRA1-204ENST00000437025 NCLP19338 710 aaKnown RBP13.3□□□□□ -0.28
GABRA1-204ENST00000437025 IL13P35225 146 aa13.3□□□□□ -0.28
GABRA1-204ENST00000437025 CDK11BP21127 795 aaKnown RBP13.29□□□□□ -0.28
GABRA1-204ENST00000437025 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.29□□□□□ -0.28
GABRA1-204ENST00000437025 IFT57Q9NWB7 429 aa13.29□□□□□ -0.28
GABRA1-204ENST00000437025 METP08581 1390 aa13.29□□□□□ -0.28
GABRA1-204ENST00000437025 DIP2CQ9Y2E4 1556 aa13.29□□□□□ -0.28
GABRA1-204ENST00000437025 C16orf71Q8IYS4 520 aaPredicted RBP13.29□□□□□ -0.28
GABRA1-204ENST00000437025 SHPRHQ149N8 1683 aa13.28□□□□□ -0.28
GABRA1-204ENST00000437025 F6X3S4 739 aa13.28□□□□□ -0.28
GABRA1-204ENST00000437025 ZBTB7BO15156 539 aaPredicted RBP13.28□□□□□ -0.28
GABRA1-204ENST00000437025 FOXO3O43524 673 aa13.28□□□□□ -0.28
GABRA1-204ENST00000437025 MCM4P33991 863 aa13.28□□□□□ -0.28
GABRA1-204ENST00000437025 CFAP74Q9C0B2 1584 aa13.28□□□□□ -0.28
GABRA1-204ENST00000437025 PTPRMP28827 1452 aa13.28□□□□□ -0.28
GABRA1-204ENST00000437025 SLC4A2P04920 1241 aa13.28□□□□□ -0.28
GABRA1-204ENST00000437025 RBM33Q96EV2 1170 aaKnown RBP13.28□□□□□ -0.28
GABRA1-204ENST00000437025 CFAP44Q96MT7 982 aa13.28□□□□□ -0.28
GABRA1-204ENST00000437025 TSPYL4Q9UJ04 414 aa13.28□□□□□ -0.28
GABRA1-204ENST00000437025 GOLGA6L3A6NEY3 463 aa13.27□□□□□ -0.28
GABRA1-204ENST00000437025 NOL8Q76FK4 1167 aaKnown RBP13.27□□□□□ -0.28
GABRA1-204ENST00000437025 PIK3C2BO00750 1634 aa13.27□□□□□ -0.28
GABRA1-204ENST00000437025 EIF4A2Q14240 407 aaKnown RBP13.27□□□□□ -0.29
GABRA1-204ENST00000437025 FOXD4L5Q5VV16 416 aaPredicted RBP13.27□□□□□ -0.29
GABRA1-204ENST00000437025 LMOD2Q6P5Q4 547 aa13.27□□□□□ -0.29
GABRA1-204ENST00000437025 FOXD4L4Q8WXT5 416 aaPredicted RBP13.27□□□□□ -0.29
GABRA1-204ENST00000437025 TAOK2Q9UL54 1235 aa13.27□□□□□ -0.29
GABRA1-204ENST00000437025 SIGLEC1Q9BZZ2 1709 aa13.27□□□□□ -0.29
GABRA1-204ENST00000437025 IFT172Q9UG01 1749 aa13.27□□□□□ -0.29
GABRA1-204ENST00000437025 TSPOAP1O95153 1857 aa13.27□□□□□ -0.29
GABRA1-204ENST00000437025 ACEP12821 1306 aa13.27□□□□□ -0.29
GABRA1-204ENST00000437025 TRAK2O60296 914 aa13.26□□□□□ -0.29
GABRA1-204ENST00000437025 TBC1D9Q6ZT07 1266 aa13.26□□□□□ -0.29
GABRA1-204ENST00000437025 GCC1Q96CN9 775 aa13.26□□□□□ -0.29
GABRA1-204ENST00000437025 MYO3AQ8NEV4 1616 aa13.26□□□□□ -0.29
GABRA1-204ENST00000437025 ZC3H13Q5T200 1668 aaKnown RBP13.26□□□□□ -0.29
GABRA1-204ENST00000437025 NEURL4Q96JN8 1562 aa13.25□□□□□ -0.29
GABRA1-204ENST00000437025 OTUD7AQ8TE49 926 aaPredicted RBP13.25□□□□□ -0.29
GABRA1-204ENST00000437025 ARHGAP31Q2M1Z3 1444 aa13.25□□□□□ -0.29
GABRA1-204ENST00000437025 ARHGEF28Q8N1W1 1705 aaKnown RBP13.25□□□□□ -0.29
GABRA1-204ENST00000437025 L1TD1Q5T7N2 865 aaKnown RBP13.24□□□□□ -0.29
GABRA1-204ENST00000437025 EID1Q9Y6B2 187 aa13.24□□□□□ -0.29
GABRA1-204ENST00000437025 ZFYVE9O95405 1425 aa13.24□□□□□ -0.29
GABRA1-204ENST00000437025 NLRP6P59044 892 aa13.24□□□□□ -0.29
GABRA1-204ENST00000437025 TSHZ3Q63HK5 1081 aa13.24□□□□□ -0.29
GABRA1-204ENST00000437025 MEIS3Q99687 375 aa13.24□□□□□ -0.29
GABRA1-204ENST00000437025 ANTXR1Q9H6X2 564 aa13.24□□□□□ -0.29
GABRA1-204ENST00000437025 CDC45O75419 566 aa13.23□□□□□ -0.29
GABRA1-204ENST00000437025 SIRT2Q8IXJ6 389 aa13.23□□□□□ -0.29
GABRA1-204ENST00000437025 ZNF428Q96B54 188 aa13.23□□□□□ -0.29
GABRA1-204ENST00000437025 ZNF692Q9BU19 519 aaPredicted RBP13.23□□□□□ -0.29
GABRA1-204ENST00000437025 STK31Q9BXU1 1019 aa13.23□□□□□ -0.29
GABRA1-204ENST00000437025 ALKQ9UM73 1620 aa13.23□□□□□ -0.29
GABRA1-204ENST00000437025 PRR36Q9H6K5 1346 aa13.23□□□□□ -0.29
GABRA1-204ENST00000437025 CD163L1Q9NR16 1453 aa13.23□□□□□ -0.29
GABRA1-204ENST00000437025 TTC21BQ7Z4L5 1316 aa13.23□□□□□ -0.29
GABRA1-204ENST00000437025 FKBP5Q13451 457 aaPredicted RBP13.23□□□□□ -0.29
GABRA1-204ENST00000437025 BMP2KLQ5H9B9 411 aa13.23□□□□□ -0.29
GABRA1-204ENST00000437025 CASC1Q6TDU7 716 aa13.22□□□□□ -0.29
GABRA1-204ENST00000437025 LRRC7Q96NW7 1537 aa13.22□□□□□ -0.29
GABRA1-204ENST00000437025 PANK2Q9BZ23 570 aa13.22□□□□□ -0.29
GABRA1-204ENST00000437025 ZMYM3Q14202 1370 aa13.22□□□□□ -0.29
GABRA1-204ENST00000437025 TRIM6-TRIM34B2RNG4 842 aa13.21□□□□□ -0.29
GABRA1-204ENST00000437025 USHBP1Q8N6Y0 703 aa13.21□□□□□ -0.29
GABRA1-204ENST00000437025 GBP4Q96PP9 640 aa13.21□□□□□ -0.29
GABRA1-204ENST00000437025 EXOC6BQ9Y2D4 811 aa13.21□□□□□ -0.29
GABRA1-204ENST00000437025 MYO5BQ9ULV0 1848 aa13.21□□□□□ -0.29
GABRA1-204ENST00000437025 EIF2S2P20042 333 aaKnown RBP13.21□□□□□ -0.3
GABRA1-204ENST00000437025 FAM135BQ49AJ0 1406 aa13.21□□□□□ -0.3
GABRA1-204ENST00000437025 ARHGEF40Q8TER5 1519 aa13.21□□□□□ -0.3
GABRA1-204ENST00000437025 FOXD4L6Q3SYB3 417 aaPredicted RBP13.2□□□□□ -0.3
GABRA1-204ENST00000437025 FOXD4L3Q6VB84 417 aaPredicted RBP13.2□□□□□ -0.3
GABRA1-204ENST00000437025 RILPL2Q969X0 211 aa13.2□□□□□ -0.3
GABRA1-204ENST00000437025 EDC4Q6P2E9 1401 aaKnown RBP13.2□□□□□ -0.3
GABRA1-204ENST00000437025 CD2BP2O95400 341 aaKnown RBP13.2□□□□□ -0.3
GABRA1-204ENST00000437025 PNPLA6Q8IY17 1366 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms