RNA–Protein interactions for RNA: ENST00000436140.2

LINC01516-201, Transcript of long intergenic non-protein coding RNA 1516, humanhuman

TSL 5 BASIC

Gene LINC01516, Length 2,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01516-201ENST00000436140 RGPD8O14715 1765 aaPredicted RBP14.1□□□□□ -0.15
LINC01516-201ENST00000436140 PNPLA6Q8IY17 1366 aa14.1□□□□□ -0.15
LINC01516-201ENST00000436140 RARSP54136 660 aaKnown RBP14.09□□□□□ -0.15
LINC01516-201ENST00000436140 NECTIN2Q92692 538 aa14.09□□□□□ -0.15
LINC01516-201ENST00000436140 HOXC9P31274 260 aa14.09□□□□□ -0.15
LINC01516-201ENST00000436140 CDC42BPGQ6DT37 1551 aa14.09□□□□□ -0.15
LINC01516-201ENST00000436140 PNNQ9H307 717 aaKnown RBP14.08□□□□□ -0.16
LINC01516-201ENST00000436140 GCP02774 474 aa14.08□□□□□ -0.16
LINC01516-201ENST00000436140 RLBP1P12271 317 aa14.08□□□□□ -0.16
LINC01516-201ENST00000436140 TTC21AQ8NDW8 1320 aa14.08□□□□□ -0.16
LINC01516-201ENST00000436140 MTHFSDQ2M296 383 aaKnown RBP14.07□□□□□ -0.16
LINC01516-201ENST00000436140 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.07□□□□□ -0.16
LINC01516-201ENST00000436140 SSH1Q8WYL5 1049 aa14.07□□□□□ -0.16
LINC01516-201ENST00000436140 MAP2P11137 1827 aaKnown RBP14.07□□□□□ -0.16
LINC01516-201ENST00000436140 PIK3R4Q99570 1358 aa14.07□□□□□ -0.16
LINC01516-201ENST00000436140 PHF23Q9BUL5 403 aaPredicted RBP14.06□□□□□ -0.16
LINC01516-201ENST00000436140 AXIN2Q9Y2T1 843 aa14.06□□□□□ -0.16
LINC01516-201ENST00000436140 HAP1P54257 671 aaPredicted RBP14.05□□□□□ -0.16
LINC01516-201ENST00000436140 NBPF6Q5VWK0 638 aa14.05□□□□□ -0.16
LINC01516-201ENST00000436140 NBPF4Q96M43 638 aa14.05□□□□□ -0.16
LINC01516-201ENST00000436140 MBIPQ9NS73 344 aa14.05□□□□□ -0.16
LINC01516-201ENST00000436140 COL3A1P02461 1466 aaPredicted RBP14.05□□□□□ -0.16
LINC01516-201ENST00000436140 INSRP06213 1382 aa14.05□□□□□ -0.16
LINC01516-201ENST00000436140 C8orf58Q8NAV2 365 aa14.04□□□□□ -0.16
LINC01516-201ENST00000436140 SHPRHQ149N8 1683 aa14.04□□□□□ -0.16
LINC01516-201ENST00000436140 AATKQ6ZMQ8 1374 aa14.04□□□□□ -0.16
LINC01516-201ENST00000436140 NOB1Q9ULX3 412 aaKnown RBP14.04□□□□□ -0.16
LINC01516-201ENST00000436140 CCDC27Q2M243 656 aa14.04□□□□□ -0.16
LINC01516-201ENST00000436140 RTF1Q92541 710 aaKnown RBP14.04□□□□□ -0.16
LINC01516-201ENST00000436140 ADGRL3Q9HAR2 1447 aa14.03□□□□□ -0.16
LINC01516-201ENST00000436140 CSB-PGBD3P0DP91 1061 aa14.03□□□□□ -0.16
LINC01516-201ENST00000436140 RGS3P49796 1198 aa14.03□□□□□ -0.16
LINC01516-201ENST00000436140 ERICH6BQ5W0A0 696 aa14.03□□□□□ -0.16
LINC01516-201ENST00000436140 FTSJ3Q8IY81 847 aaKnown RBP14.03□□□□□ -0.16
LINC01516-201ENST00000436140 OVOS2A0A0J9YW53 1432 aa14.03□□□□□ -0.16
LINC01516-201ENST00000436140 OVOS2Q6IE36 1432 aa14.03□□□□□ -0.16
LINC01516-201ENST00000436140 SSH2Q76I76 1423 aa14.02□□□□□ -0.16
LINC01516-201ENST00000436140 USP32Q8NFA0 1604 aa14.02□□□□□ -0.16
LINC01516-201ENST00000436140 NLRP2Q9NX02 1062 aa14.02□□□□□ -0.17
LINC01516-201ENST00000436140 USP35Q9P2H5 1018 aa14.02□□□□□ -0.17
LINC01516-201ENST00000436140 MYT1Q01538 1121 aa14.01□□□□□ -0.17
LINC01516-201ENST00000436140 CADPS2Q86UW7 1296 aa14.01□□□□□ -0.17
LINC01516-201ENST00000436140 NGEFQ8N5V2 710 aa14.01□□□□□ -0.17
LINC01516-201ENST00000436140 ZNF428Q96B54 188 aa14.01□□□□□ -0.17
LINC01516-201ENST00000436140 FLT4P35916 1363 aa14.01□□□□□ -0.17
LINC01516-201ENST00000436140 RBM19Q9Y4C8 960 aaKnown RBP14.01□□□□□ -0.17
LINC01516-201ENST00000436140 ITPRIPQ8IWB1 547 aa14.01□□□□□ -0.17
LINC01516-201ENST00000436140 KNDC1Q76NI1 1749 aa14□□□□□ -0.17
LINC01516-201ENST00000436140 SLAIN2Q9P270 581 aa14□□□□□ -0.17
LINC01516-201ENST00000436140 LRRC7Q96NW7 1537 aa14□□□□□ -0.17
LINC01516-201ENST00000436140 TWISTNBQ3B726 338 aaPredicted RBP13.99□□□□□ -0.17
LINC01516-201ENST00000436140 MPRIPQ6WCQ1 1025 aa13.99□□□□□ -0.17
LINC01516-201ENST00000436140 ANKRD24Q8TF21 1146 aa13.99□□□□□ -0.17
LINC01516-201ENST00000436140 SBNO1A3KN83 1393 aa13.98□□□□□ -0.17
LINC01516-201ENST00000436140 USP31Q70CQ4 1352 aa13.98□□□□□ -0.17
LINC01516-201ENST00000436140 IP6K1Q92551 441 aa13.98□□□□□ -0.17
LINC01516-201ENST00000436140 IQSEC2Q5JU85 1478 aa13.98□□□□□ -0.17
LINC01516-201ENST00000436140 IGHDP01880 384 aa13.98□□□□□ -0.17
LINC01516-201ENST00000436140 TRIM27P14373 513 aa13.98□□□□□ -0.17
LINC01516-201ENST00000436140 GNAI1P63096 354 aa13.98□□□□□ -0.17
LINC01516-201ENST00000436140 LGR6Q9HBX8 967 aa13.98□□□□□ -0.17
LINC01516-201ENST00000436140 TSPYL4Q9UJ04 414 aa13.98□□□□□ -0.17
LINC01516-201ENST00000436140 KIF20BQ96Q89 1820 aa13.98□□□□□ -0.17
LINC01516-201ENST00000436140 C1orf167Q5SNV9 1468 aa13.98□□□□□ -0.17
LINC01516-201ENST00000436140 MSH6P52701 1360 aa13.98□□□□□ -0.17
LINC01516-201ENST00000436140 XRN1Q8IZH2 1706 aaKnown RBP13.98□□□□□ -0.17
LINC01516-201ENST00000436140 ZKSCAN2Q63HK3 967 aa13.98□□□□□ -0.17
LINC01516-201ENST00000436140 BRINP3Q76B58 766 aa13.98□□□□□ -0.17
LINC01516-201ENST00000436140 VAMP4O75379 141 aa13.97□□□□□ -0.17
LINC01516-201ENST00000436140 C1orf115Q9H7X2 142 aa13.97□□□□□ -0.17
LINC01516-201ENST00000436140 CDK12Q9NYV4 1490 aaPredicted RBP13.97□□□□□ -0.17
LINC01516-201ENST00000436140 ANKARQ7Z5J8 1434 aa13.97□□□□□ -0.17
LINC01516-201ENST00000436140 NPM2Q86SE8 214 aaKnown RBP13.97□□□□□ -0.17
LINC01516-201ENST00000436140 KCNH5Q8NCM2 988 aa13.97□□□□□ -0.17
LINC01516-201ENST00000436140 CFAP44Q96MT7 982 aa13.96□□□□□ -0.17
LINC01516-201ENST00000436140 STRN4Q9NRL3 753 aa13.96□□□□□ -0.17
LINC01516-201ENST00000436140 ITSN1Q15811 1721 aa13.96□□□□□ -0.17
LINC01516-201ENST00000436140 CHD2O14647 1828 aaKnown RBP13.96□□□□□ -0.17
LINC01516-201ENST00000436140 ARHGEF25Q86VW2 580 aa13.96□□□□□ -0.17
LINC01516-201ENST00000436140 DZIP1LQ8IYY4 767 aaKnown RBP13.96□□□□□ -0.17
LINC01516-201ENST00000436140 PIP4K2BP78356 416 aa13.95□□□□□ -0.18
LINC01516-201ENST00000436140 TMEM57Q8N5G2 664 aa13.95□□□□□ -0.18
LINC01516-201ENST00000436140 IL17REQ8NFR9 667 aa13.95□□□□□ -0.18
LINC01516-201ENST00000436140 NALCNQ8IZF0 1738 aa13.95□□□□□ -0.18
LINC01516-201ENST00000436140 PCDHB15Q9Y5E8 787 aa13.95□□□□□ -0.18
LINC01516-201ENST00000436140 EIF2S2P20042 333 aaKnown RBP13.95□□□□□ -0.18
LINC01516-201ENST00000436140 LMOD3Q0VAK6 560 aa13.95□□□□□ -0.18
LINC01516-201ENST00000436140 ADGRB2O60241 1585 aa13.94□□□□□ -0.18
LINC01516-201ENST00000436140 ZNF530Q6P9A1 599 aaPredicted RBP13.94□□□□□ -0.18
LINC01516-201ENST00000436140 IGSF1Q8N6C5 1336 aa13.94□□□□□ -0.18
LINC01516-201ENST00000436140 KCNQ3O43525 872 aa13.93□□□□□ -0.18
LINC01516-201ENST00000436140 IFT57Q9NWB7 429 aa13.93□□□□□ -0.18
LINC01516-201ENST00000436140 GNAT3A8MTJ3 354 aa13.93□□□□□ -0.18
LINC01516-201ENST00000436140 SLC4A10Q6U841 1118 aa13.93□□□□□ -0.18
LINC01516-201ENST00000436140 MON2Q7Z3U7 1717 aa13.93□□□□□ -0.18
LINC01516-201ENST00000436140 ATF7IPQ6VMQ6 1270 aa13.92□□□□□ -0.18
LINC01516-201ENST00000436140 NPHP3Q7Z494 1330 aa13.92□□□□□ -0.18
LINC01516-201ENST00000436140 ANXA1P04083 346 aa13.92□□□□□ -0.18
LINC01516-201ENST00000436140 CALD1Q05682 793 aaKnown RBP13.92□□□□□ -0.18
LINC01516-201ENST00000436140 PRDM11Q9NQV5 511 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms