RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 ARHGAP31Q2M1Z3 1444 aa19.6■□□□□ 0.73
SCARF1-203ENST00000434376 VAMP4O75379 141 aa19.59■□□□□ 0.73
SCARF1-203ENST00000434376 NSD2O96028 1365 aa19.59■□□□□ 0.73
SCARF1-203ENST00000434376 GZF1Q9H116 711 aaPredicted RBP19.59■□□□□ 0.73
SCARF1-203ENST00000434376 GNAI1P63096 354 aa19.58■□□□□ 0.73
SCARF1-203ENST00000434376 CD163L1Q9NR16 1453 aa19.58■□□□□ 0.73
SCARF1-203ENST00000434376 CLTCQ00610 1675 aaKnown RBP19.58■□□□□ 0.72
SCARF1-203ENST00000434376 SETBP1Q9Y6X0 1596 aa19.58■□□□□ 0.72
SCARF1-203ENST00000434376 RICTORQ6R327 1708 aa19.57■□□□□ 0.72
SCARF1-203ENST00000434376 SMARCA5O60264 1052 aaPredicted RBP19.57■□□□□ 0.72
SCARF1-203ENST00000434376 EIF2S2P20042 333 aaKnown RBP19.57■□□□□ 0.72
SCARF1-203ENST00000434376 KIAA1210Q9ULL0 1709 aa19.57■□□□□ 0.72
SCARF1-203ENST00000434376 SLC4A2P04920 1241 aa19.56■□□□□ 0.72
SCARF1-203ENST00000434376 TSPYL4Q9UJ04 414 aa19.56■□□□□ 0.72
SCARF1-203ENST00000434376 ESCO1Q5FWF5 840 aa19.56■□□□□ 0.72
SCARF1-203ENST00000434376 C16orf71Q8IYS4 520 aaPredicted RBP19.56■□□□□ 0.72
SCARF1-203ENST00000434376 ARHGEF28Q8N1W1 1705 aaKnown RBP19.56■□□□□ 0.72
SCARF1-203ENST00000434376 IFT172Q9UG01 1749 aa19.56■□□□□ 0.72
SCARF1-203ENST00000434376 KIF16BQ96L93 1317 aa19.55■□□□□ 0.72
SCARF1-203ENST00000434376 MAP3K19Q56UN5 1328 aa19.55■□□□□ 0.72
SCARF1-203ENST00000434376 TSHZ3Q63HK5 1081 aa19.54■□□□□ 0.72
SCARF1-203ENST00000434376 PREX1Q8TCU6 1659 aa19.54■□□□□ 0.72
SCARF1-203ENST00000434376 PUS7Q96PZ0 661 aaKnown RBP19.54■□□□□ 0.72
SCARF1-203ENST00000434376 TMEM131LA2VDJ0 1609 aa19.54■□□□□ 0.72
SCARF1-203ENST00000434376 HSP90AA1P07900 732 aaKnown RBP19.54■□□□□ 0.72
SCARF1-203ENST00000434376 ZC3H13Q5T200 1668 aaKnown RBP19.54■□□□□ 0.72
SCARF1-203ENST00000434376 TMEM2Q9UHN6 1383 aa19.54■□□□□ 0.72
SCARF1-203ENST00000434376 ARHGEF40Q8TER5 1519 aa19.53■□□□□ 0.72
SCARF1-203ENST00000434376 ANXA1P04083 346 aa19.53■□□□□ 0.72
SCARF1-203ENST00000434376 MTHFSDQ2M296 383 aaKnown RBP19.52■□□□□ 0.72
SCARF1-203ENST00000434376 G2E3Q7L622 706 aa19.52■□□□□ 0.72
SCARF1-203ENST00000434376 ZNF692Q9BU19 519 aaPredicted RBP19.52■□□□□ 0.72
SCARF1-203ENST00000434376 ZBTB40Q9NUA8 1239 aa19.52■□□□□ 0.72
SCARF1-203ENST00000434376 MRPL50Q8N5N7 158 aaKnown RBP19.51■□□□□ 0.71
SCARF1-203ENST00000434376 DIP2BQ9P265 1576 aa19.51■□□□□ 0.71
SCARF1-203ENST00000434376 TPRNQ4KMQ1 711 aa19.51■□□□□ 0.71
SCARF1-203ENST00000434376 SETD1BQ9UPS6 1966 aaKnown RBP19.5■□□□□ 0.71
SCARF1-203ENST00000434376 OTUD7AQ8TE49 926 aaPredicted RBP19.5■□□□□ 0.71
SCARF1-203ENST00000434376 CPS1P31327 1500 aa19.5■□□□□ 0.71
SCARF1-203ENST00000434376 BECN1Q14457 450 aa19.5■□□□□ 0.71
SCARF1-203ENST00000434376 C22orf23Q9BZE7 217 aa19.5■□□□□ 0.71
SCARF1-203ENST00000434376 USP19O94966 1318 aa19.49■□□□□ 0.71
SCARF1-203ENST00000434376 CFAP44Q96MT7 982 aa19.49■□□□□ 0.71
SCARF1-203ENST00000434376 EYA1Q99502 592 aa19.49■□□□□ 0.71
SCARF1-203ENST00000434376 PSME1Q06323 249 aa19.49■□□□□ 0.71
SCARF1-203ENST00000434376 DDX17Q92841 729 aaKnown RBP19.49■□□□□ 0.71
SCARF1-203ENST00000434376 NINLQ9Y2I6 1382 aa19.49■□□□□ 0.71
SCARF1-203ENST00000434376 THEMISQ8N1K5 641 aaPredicted RBP19.48■□□□□ 0.71
SCARF1-203ENST00000434376 IQSEC2Q5JU85 1478 aa19.48■□□□□ 0.71
SCARF1-203ENST00000434376 CHD1LQ86WJ1 897 aa19.48■□□□□ 0.71
SCARF1-203ENST00000434376 LRRC59Q96AG4 307 aaKnown RBP19.48■□□□□ 0.71
SCARF1-203ENST00000434376 RBM42Q9BTD8 480 aaKnown RBP19.48■□□□□ 0.71
SCARF1-203ENST00000434376 ZFYVE9O95405 1425 aa19.48■□□□□ 0.71
SCARF1-203ENST00000434376 MEIS3Q99687 375 aa19.48■□□□□ 0.71
SCARF1-203ENST00000434376 SHPRHQ149N8 1683 aa19.47■□□□□ 0.71
SCARF1-203ENST00000434376 CALD1Q05682 793 aaKnown RBP19.47■□□□□ 0.71
SCARF1-203ENST00000434376 FKBP5Q13451 457 aaPredicted RBP19.47■□□□□ 0.71
SCARF1-203ENST00000434376 NOL8Q76FK4 1167 aaKnown RBP19.46■□□□□ 0.71
SCARF1-203ENST00000434376 TBC1D2Q9BYX2 928 aa19.46■□□□□ 0.71
SCARF1-203ENST00000434376 IFT57Q9NWB7 429 aa19.46■□□□□ 0.71
SCARF1-203ENST00000434376 PPP6R1Q9UPN7 881 aa19.46■□□□□ 0.71
SCARF1-203ENST00000434376 ZBTB7BO15156 539 aaPredicted RBP19.45■□□□□ 0.7
SCARF1-203ENST00000434376 LMOD3Q0VAK6 560 aa19.45■□□□□ 0.7
SCARF1-203ENST00000434376 EDC4Q6P2E9 1401 aaKnown RBP19.45■□□□□ 0.7
SCARF1-203ENST00000434376 ZC3H6P61129 1189 aaKnown RBP19.44■□□□□ 0.7
SCARF1-203ENST00000434376 SIRT2Q8IXJ6 389 aa19.44■□□□□ 0.7
SCARF1-203ENST00000434376 EXOC6BQ9Y2D4 811 aa19.44■□□□□ 0.7
SCARF1-203ENST00000434376 LRRC7Q96NW7 1537 aa19.44■□□□□ 0.7
SCARF1-203ENST00000434376 NLRP1Q9C000 1473 aa19.44■□□□□ 0.7
SCARF1-203ENST00000434376 ORAI2Q96SN7 254 aa19.43■□□□□ 0.7
SCARF1-203ENST00000434376 MYO3AQ8NEV4 1616 aa19.43■□□□□ 0.7
SCARF1-203ENST00000434376 FOXD4L5Q5VV16 416 aaPredicted RBP19.41■□□□□ 0.7
SCARF1-203ENST00000434376 FOXD4L4Q8WXT5 416 aaPredicted RBP19.41■□□□□ 0.7
SCARF1-203ENST00000434376 NAP1L5Q96NT1 182 aaPredicted RBP19.41■□□□□ 0.7
SCARF1-203ENST00000434376 PNPLA6Q8IY17 1366 aa19.4■□□□□ 0.7
SCARF1-203ENST00000434376 MPRIPQ6WCQ1 1025 aa19.4■□□□□ 0.7
SCARF1-203ENST00000434376 STK31Q9BXU1 1019 aa19.4■□□□□ 0.7
SCARF1-203ENST00000434376 ALDH1L2Q3SY69 923 aa19.4■□□□□ 0.7
SCARF1-203ENST00000434376 HSP90AB1P08238 724 aaKnown RBP19.39■□□□□ 0.69
SCARF1-203ENST00000434376 API5Q9BZZ5 524 aaKnown RBP19.39■□□□□ 0.69
SCARF1-203ENST00000434376 IL16Q14005 1332 aa19.39■□□□□ 0.69
SCARF1-203ENST00000434376 CT47B1P0C2W7 299 aaPredicted RBP19.39■□□□□ 0.69
SCARF1-203ENST00000434376 TBC1D32Q96NH3 1257 aa19.39■□□□□ 0.69
SCARF1-203ENST00000434376 COL3A1P02461 1466 aaPredicted RBP19.38■□□□□ 0.69
SCARF1-203ENST00000434376 FAM135BQ49AJ0 1406 aa19.38■□□□□ 0.69
SCARF1-203ENST00000434376 DTNBO60941 627 aa19.38■□□□□ 0.69
SCARF1-203ENST00000434376 MAP4K4O95819 1239 aaPredicted RBP19.38■□□□□ 0.69
SCARF1-203ENST00000434376 SMC5Q8IY18 1101 aa19.38■□□□□ 0.69
SCARF1-203ENST00000434376 MAP2P11137 1827 aaKnown RBP19.37■□□□□ 0.69
SCARF1-203ENST00000434376 PTPRUQ92729 1446 aa19.37■□□□□ 0.69
SCARF1-203ENST00000434376 CABLES1Q8TDN4 633 aa19.37■□□□□ 0.69
SCARF1-203ENST00000434376 NEURL4Q96JN8 1562 aa19.37■□□□□ 0.69
SCARF1-203ENST00000434376 NUCB1Q02818 461 aa19.36■□□□□ 0.69
SCARF1-203ENST00000434376 HDAC1Q13547 482 aaPredicted RBP19.36■□□□□ 0.69
SCARF1-203ENST00000434376 HSCBQ8IWL3 235 aa19.36■□□□□ 0.69
SCARF1-203ENST00000434376 IL1RAPL2Q9NP60 686 aa19.36■□□□□ 0.69
SCARF1-203ENST00000434376 PHF8Q9UPP1 1060 aa19.36■□□□□ 0.69
SCARF1-203ENST00000434376 KCNQ3O43525 872 aa19.36■□□□□ 0.69
SCARF1-203ENST00000434376 PIP4K2AP48426 406 aaPredicted RBP19.36■□□□□ 0.69
SCARF1-203ENST00000434376 LGR6Q9HBX8 967 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms