RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 NRG2O14511 850 aaPredicted RBP10.94□□□□□ -0.66
HDAC9-213ENST00000433709 ADH1CP00326 375 aa10.94□□□□□ -0.66
HDAC9-213ENST00000433709 KCTD15Q96SI1 283 aaPredicted RBP10.94□□□□□ -0.66
HDAC9-213ENST00000433709 TIMELESSQ9UNS1 1208 aa10.94□□□□□ -0.66
HDAC9-213ENST00000433709 WASF2Q9Y6W5 498 aa10.94□□□□□ -0.66
HDAC9-213ENST00000433709 GIGYF1O75420 1035 aaPredicted RBP10.93□□□□□ -0.66
HDAC9-213ENST00000433709 FAM187AA6NFU0 413 aa10.92□□□□□ -0.66
HDAC9-213ENST00000433709 FSHRP23945 695 aa10.92□□□□□ -0.66
HDAC9-213ENST00000433709 CDV3Q9UKY7 258 aaKnown RBP10.92□□□□□ -0.66
HDAC9-213ENST00000433709 NR3C2P08235 984 aa10.91□□□□□ -0.66
HDAC9-213ENST00000433709 RAB15P59190 212 aa10.91□□□□□ -0.66
HDAC9-213ENST00000433709 SEMA3FQ13275 785 aa10.91□□□□□ -0.66
HDAC9-213ENST00000433709 NNTQ13423 1086 aa10.91□□□□□ -0.66
HDAC9-213ENST00000433709 NBPF20Q3BBV1 942 aa10.91□□□□□ -0.66
HDAC9-213ENST00000433709 ADAMTS19Q8TE59 1207 aa10.91□□□□□ -0.66
HDAC9-213ENST00000433709 HPS1Q92902 700 aa10.91□□□□□ -0.66
HDAC9-213ENST00000433709 ALG2Q9H553 416 aa10.91□□□□□ -0.66
HDAC9-213ENST00000433709 CEP126Q9P2H0 1117 aa10.91□□□□□ -0.66
HDAC9-213ENST00000433709 ZNF777Q9ULD5 760 aaPredicted RBP10.91□□□□□ -0.66
HDAC9-213ENST00000433709 MCCD1P59942 119 aaPredicted RBP10.9□□□□□ -0.66
HDAC9-213ENST00000433709 NR5A1Q13285 461 aa10.9□□□□□ -0.66
HDAC9-213ENST00000433709 LAPTM4AQ15012 233 aa10.9□□□□□ -0.66
HDAC9-213ENST00000433709 SOX11P35716 441 aa10.89□□□□□ -0.67
HDAC9-213ENST00000433709 INTS6LQ5JSJ4 861 aaKnown RBP10.89□□□□□ -0.67
HDAC9-213ENST00000433709 HDGFL1Q5TGJ6 251 aa10.89□□□□□ -0.67
HDAC9-213ENST00000433709 ESPNB1AK53 854 aa10.88□□□□□ -0.67
HDAC9-213ENST00000433709 PKDCCQ504Y2 493 aa10.88□□□□□ -0.67
HDAC9-213ENST00000433709 ZNF592Q92610 1267 aa10.88□□□□□ -0.67
HDAC9-213ENST00000433709 DGAT1O75907 488 aa10.87□□□□□ -0.67
HDAC9-213ENST00000433709 ERICH6Q7L0X2 663 aa10.86□□□□□ -0.67
HDAC9-213ENST00000433709 GLMNQ92990 594 aa10.86□□□□□ -0.67
HDAC9-213ENST00000433709 CCDC116Q8IYX3 515 aa10.85□□□□□ -0.67
HDAC9-213ENST00000433709 ERVH48-1M5A8F1 160 aa10.84□□□□□ -0.67
HDAC9-213ENST00000433709 PPP1R26Q5T8A7 1209 aaPredicted RBP10.84□□□□□ -0.67
HDAC9-213ENST00000433709 PHTF2Q8N3S3 785 aa10.84□□□□□ -0.67
HDAC9-213ENST00000433709 KLF16Q9BXK1 252 aaPredicted RBP10.84□□□□□ -0.67
HDAC9-213ENST00000433709 PIK3CDO00329 1044 aa10.83□□□□□ -0.68
HDAC9-213ENST00000433709 AVPP01185 164 aa10.83□□□□□ -0.68
HDAC9-213ENST00000433709 WDR4P57081 412 aaKnown RBP10.83□□□□□ -0.68
HDAC9-213ENST00000433709 TSGA10IPQ3SY00 556 aa10.83□□□□□ -0.68
HDAC9-213ENST00000433709 SLFNL1Q499Z3 407 aa10.83□□□□□ -0.68
HDAC9-213ENST00000433709 SEPT12Q8IYM1 358 aa10.83□□□□□ -0.68
HDAC9-213ENST00000433709 CALR3Q96L12 384 aaKnown RBP10.83□□□□□ -0.68
HDAC9-213ENST00000433709 TMPRSS4Q9NRS4 437 aa10.83□□□□□ -0.68
HDAC9-213ENST00000433709 ARID3CA6NKF2 412 aa10.82□□□□□ -0.68
HDAC9-213ENST00000433709 RNF20Q5VTR2 975 aa10.82□□□□□ -0.68
HDAC9-213ENST00000433709 ITPKCQ96DU7 683 aa10.82□□□□□ -0.68
HDAC9-213ENST00000433709 CCDC85AQ96PX6 553 aaPredicted RBP10.82□□□□□ -0.68
HDAC9-213ENST00000433709 ZFAND3Q9H8U3 227 aa10.82□□□□□ -0.68
HDAC9-213ENST00000433709 DCAF1Q9Y4B6 1507 aa10.82□□□□□ -0.68
HDAC9-213ENST00000433709 ZIC2O95409 532 aaPredicted RBP10.81□□□□□ -0.68
HDAC9-213ENST00000433709 TIMP2P16035 220 aa10.81□□□□□ -0.68
HDAC9-213ENST00000433709 DHX9Q08211 1270 aaKnown RBP10.81□□□□□ -0.68
HDAC9-213ENST00000433709 Q6ZNB5 142 aa10.81□□□□□ -0.68
HDAC9-213ENST00000433709 RNF135Q8IUD6 432 aa10.81□□□□□ -0.68
HDAC9-213ENST00000433709 MYT1Q01538 1121 aa10.8□□□□□ -0.68
HDAC9-213ENST00000433709 UCN2Q96RP3 112 aa10.8□□□□□ -0.68
HDAC9-213ENST00000433709 PCDHB11Q9Y5F2 797 aa10.8□□□□□ -0.68
HDAC9-213ENST00000433709 EMILIN1Q9Y6C2 1016 aa10.8□□□□□ -0.68
HDAC9-213ENST00000433709 ZNF784Q8NCA9 323 aaPredicted RBP10.79□□□□□ -0.68
HDAC9-213ENST00000433709 ST8SIA5O15466 376 aa10.78□□□□□ -0.68
HDAC9-213ENST00000433709 CAPN5O15484 640 aaPredicted RBP10.78□□□□□ -0.68
HDAC9-213ENST00000433709 CDCA7Q9BWT1 371 aaPredicted RBP10.78□□□□□ -0.68
HDAC9-213ENST00000433709 PGPEP1Q9NXJ5 209 aa10.78□□□□□ -0.68
HDAC9-213ENST00000433709 ZCCHC6Q5VYS8 1495 aaKnown RBP10.78□□□□□ -0.68
HDAC9-213ENST00000433709 LCE2BO14633 110 aa10.77□□□□□ -0.69
HDAC9-213ENST00000433709 CYLDQ9NQC7 956 aa10.77□□□□□ -0.69
HDAC9-213ENST00000433709 CHIC2Q9UKJ5 165 aa10.77□□□□□ -0.69
HDAC9-213ENST00000433709 SUPT5HO00267 1087 aaKnown RBP10.76□□□□□ -0.69
HDAC9-213ENST00000433709 LILRA1O75019 489 aa10.76□□□□□ -0.69
HDAC9-213ENST00000433709 SKIP12755 728 aa10.76□□□□□ -0.69
HDAC9-213ENST00000433709 CBLBQ13191 982 aa10.76□□□□□ -0.69
HDAC9-213ENST00000433709 CTC1Q2NKJ3 1217 aa10.76□□□□□ -0.69
HDAC9-213ENST00000433709 TBC1D9Q6ZT07 1266 aa10.76□□□□□ -0.69
HDAC9-213ENST00000433709 AAASQ9NRG9 546 aa10.76□□□□□ -0.69
HDAC9-213ENST00000433709 AXIN1O15169 862 aa10.75□□□□□ -0.69
HDAC9-213ENST00000433709 ADD1P35611 737 aaKnown RBP10.75□□□□□ -0.69
HDAC9-213ENST00000433709 SCTRP47872 440 aa10.75□□□□□ -0.69
HDAC9-213ENST00000433709 SMCPP49901 116 aaPredicted RBP10.75□□□□□ -0.69
HDAC9-213ENST00000433709 CCDC125Q86Z20 511 aa10.75□□□□□ -0.69
HDAC9-213ENST00000433709 PLPP7Q8NBV4 271 aa10.75□□□□□ -0.69
HDAC9-213ENST00000433709 C1orf115Q9H7X2 142 aa10.75□□□□□ -0.69
HDAC9-213ENST00000433709 DOLKQ9UPQ8 538 aa10.75□□□□□ -0.69
HDAC9-213ENST00000433709 TRAF7Q6Q0C0 670 aa10.74□□□□□ -0.69
HDAC9-213ENST00000433709 CRIPAKQ8N1N5 446 aa10.74□□□□□ -0.69
HDAC9-213ENST00000433709 DACH1Q9UI36 760 aa10.74□□□□□ -0.69
HDAC9-213ENST00000433709 NFATC2IPQ8NCF5 419 aa10.73□□□□□ -0.69
HDAC9-213ENST00000433709 TFIP11Q9UBB9 837 aaKnown RBP10.73□□□□□ -0.69
HDAC9-213ENST00000433709 ERVK-9P63128 1117 aa10.72□□□□□ -0.69
HDAC9-213ENST00000433709 MAP7D1Q3KQU3 841 aa10.72□□□□□ -0.69
HDAC9-213ENST00000433709 OXLD1Q5BKU9 147 aa10.72□□□□□ -0.69
HDAC9-213ENST00000433709 DEPDC4Q8N2C3 294 aa10.72□□□□□ -0.69
HDAC9-213ENST00000433709 PALM3A6NDB9 673 aaPredicted RBP10.71□□□□□ -0.69
HDAC9-213ENST00000433709 ATP9BO43861 1147 aa10.71□□□□□ -0.69
HDAC9-213ENST00000433709 CC2D2BQ6DHV5 1058 aa10.71□□□□□ -0.69
HDAC9-213ENST00000433709 Q6ZVU0 165 aa10.71□□□□□ -0.69
HDAC9-213ENST00000433709 PPP1R12CQ9BZL4 782 aa10.71□□□□□ -0.69
HDAC9-213ENST00000433709 SHROOM4Q9ULL8 1493 aa10.7□□□□□ -0.7
HDAC9-213ENST00000433709 USP17L5A8MUK1 530 aa10.7□□□□□ -0.7
HDAC9-213ENST00000433709 BMP1P13497 986 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms