RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 SENP3-EIF4A1A0A087X0R7 540 aa9.93□□□□□ -0.82
CNKSR3-202ENST00000433165 XPCQ01831 940 aaPredicted RBP9.93□□□□□ -0.82
CNKSR3-202ENST00000433165 CENPQQ7L2Z9 268 aaPredicted RBP9.93□□□□□ -0.82
CNKSR3-202ENST00000433165 PMFBP1Q8TBY8 1022 aa9.93□□□□□ -0.82
CNKSR3-202ENST00000433165 CRBNQ96SW2 442 aa9.93□□□□□ -0.82
CNKSR3-202ENST00000433165 QTRT2Q9H974 415 aaKnown RBP9.92□□□□□ -0.82
CNKSR3-202ENST00000433165 ATRNO75882 1429 aa9.92□□□□□ -0.82
CNKSR3-202ENST00000433165 PPIP5K1Q6PFW1 1433 aa9.92□□□□□ -0.82
CNKSR3-202ENST00000433165 CLCN1P35523 988 aa9.91□□□□□ -0.82
CNKSR3-202ENST00000433165 LMOD2Q6P5Q4 547 aa9.91□□□□□ -0.82
CNKSR3-202ENST00000433165 CARD11Q9BXL7 1154 aa9.91□□□□□ -0.82
CNKSR3-202ENST00000433165 COL14A1Q05707 1796 aaKnown RBP9.91□□□□□ -0.82
CNKSR3-202ENST00000433165 HSP90AA2PQ14568 343 aaPredicted RBP9.91□□□□□ -0.82
CNKSR3-202ENST00000433165 PUS7Q96PZ0 661 aaKnown RBP9.91□□□□□ -0.82
CNKSR3-202ENST00000433165 SLIT2O94813 1529 aa9.9□□□□□ -0.82
CNKSR3-202ENST00000433165 ZNF692Q9BU19 519 aaPredicted RBP9.9□□□□□ -0.82
CNKSR3-202ENST00000433165 PLCH1Q4KWH8 1693 aa9.9□□□□□ -0.83
CNKSR3-202ENST00000433165 ACEP12821 1306 aa9.89□□□□□ -0.83
CNKSR3-202ENST00000433165 UNC5CLQ8IV45 518 aa9.89□□□□□ -0.83
CNKSR3-202ENST00000433165 BLMP54132 1417 aaPredicted RBP9.89□□□□□ -0.83
CNKSR3-202ENST00000433165 NINLQ9Y2I6 1382 aa9.89□□□□□ -0.83
CNKSR3-202ENST00000433165 PLIN1O60240 522 aa9.89□□□□□ -0.83
CNKSR3-202ENST00000433165 CNGB1Q14028 1251 aaPredicted RBP9.89□□□□□ -0.83
CNKSR3-202ENST00000433165 CRYBG1Q9Y4K1 1723 aa9.89□□□□□ -0.83
CNKSR3-202ENST00000433165 PARD3Q8TEW0 1356 aa9.89□□□□□ -0.83
CNKSR3-202ENST00000433165 PHRF1Q9P1Y6 1649 aaKnown RBP9.88□□□□□ -0.83
CNKSR3-202ENST00000433165 HSP90AA1P07900 732 aaKnown RBP9.88□□□□□ -0.83
CNKSR3-202ENST00000433165 PNNQ9H307 717 aaKnown RBP9.88□□□□□ -0.83
CNKSR3-202ENST00000433165 NLRP13Q86W25 1043 aa9.88□□□□□ -0.83
CNKSR3-202ENST00000433165 CDCA7LQ96GN5 454 aa9.88□□□□□ -0.83
CNKSR3-202ENST00000433165 BCL9LQ86UU0 1499 aa9.87□□□□□ -0.83
CNKSR3-202ENST00000433165 NAP1L5Q96NT1 182 aaPredicted RBP9.87□□□□□ -0.83
CNKSR3-202ENST00000433165 TTC21AQ8NDW8 1320 aa9.87□□□□□ -0.83
CNKSR3-202ENST00000433165 VPS72Q15906 364 aa9.87□□□□□ -0.83
CNKSR3-202ENST00000433165 CABP2Q9NPB3 220 aa9.87□□□□□ -0.83
CNKSR3-202ENST00000433165 AKAP12Q02952 1782 aa9.86□□□□□ -0.83
CNKSR3-202ENST00000433165 RGS12O14924 1447 aa9.86□□□□□ -0.83
CNKSR3-202ENST00000433165 USP6P35125 1406 aa9.86□□□□□ -0.83
CNKSR3-202ENST00000433165 FSD2A1L4K1 749 aa9.86□□□□□ -0.83
CNKSR3-202ENST00000433165 CDCA8Q53HL2 280 aa9.86□□□□□ -0.83
CNKSR3-202ENST00000433165 GJD4Q96KN9 370 aaPredicted RBP9.86□□□□□ -0.83
CNKSR3-202ENST00000433165 POLR3GLQ9BT43 218 aa9.86□□□□□ -0.83
CNKSR3-202ENST00000433165 ABTB2Q8N961 1025 aa9.85□□□□□ -0.83
CNKSR3-202ENST00000433165 USP19O94966 1318 aa9.85□□□□□ -0.83
CNKSR3-202ENST00000433165 NRAPQ86VF7 1730 aa9.85□□□□□ -0.83
CNKSR3-202ENST00000433165 CPDO75976 1380 aa9.84□□□□□ -0.83
CNKSR3-202ENST00000433165 HDGFL2Q7Z4V5 671 aaPredicted RBP9.84□□□□□ -0.83
CNKSR3-202ENST00000433165 PRDM11Q9NQV5 511 aa9.84□□□□□ -0.83
CNKSR3-202ENST00000433165 NRKQ7Z2Y5 1582 aa9.84□□□□□ -0.83
CNKSR3-202ENST00000433165 XRCC6P12956 609 aaKnown RBP eCLIP9.84□□□□□ -0.83
CNKSR3-202ENST00000433165 C20orf194Q5TEA3 1177 aa9.84□□□□□ -0.83
CNKSR3-202ENST00000433165 CCDC125Q86Z20 511 aa9.84□□□□□ -0.83
CNKSR3-202ENST00000433165 TERF2IPQ9NYB0 399 aa9.84□□□□□ -0.83
CNKSR3-202ENST00000433165 CABP1Q9NZU7 370 aa9.84□□□□□ -0.83
CNKSR3-202ENST00000433165 ABCC6O95255 1503 aa9.83□□□□□ -0.84
CNKSR3-202ENST00000433165 MON2Q7Z3U7 1717 aa9.83□□□□□ -0.84
CNKSR3-202ENST00000433165 KCNH5Q8NCM2 988 aa9.83□□□□□ -0.84
CNKSR3-202ENST00000433165 ANTXR1Q9H6X2 564 aa9.83□□□□□ -0.84
CNKSR3-202ENST00000433165 SLIT3O75094 1523 aa9.83□□□□□ -0.84
CNKSR3-202ENST00000433165 CABLES1Q8TDN4 633 aa9.83□□□□□ -0.84
CNKSR3-202ENST00000433165 CCDC9Q9Y3X0 531 aaKnown RBP9.83□□□□□ -0.84
CNKSR3-202ENST00000433165 USP54Q70EL1 1684 aa9.82□□□□□ -0.84
CNKSR3-202ENST00000433165 TMF1P82094 1093 aa9.82□□□□□ -0.84
CNKSR3-202ENST00000433165 BECN1Q14457 450 aa9.82□□□□□ -0.84
CNKSR3-202ENST00000433165 GLI3P10071 1580 aa9.82□□□□□ -0.84
CNKSR3-202ENST00000433165 CPSF1Q10570 1443 aaKnown RBP9.82□□□□□ -0.84
CNKSR3-202ENST00000433165 GOLGA6L3A6NEY3 463 aa9.82□□□□□ -0.84
CNKSR3-202ENST00000433165 SSH2Q76I76 1423 aa9.81□□□□□ -0.84
CNKSR3-202ENST00000433165 FAM83GA6ND36 823 aa9.81□□□□□ -0.84
CNKSR3-202ENST00000433165 BTG4Q9NY30 223 aa9.81□□□□□ -0.84
CNKSR3-202ENST00000433165 KIAA0232Q92628 1395 aa9.8□□□□□ -0.84
CNKSR3-202ENST00000433165 EDC4Q6P2E9 1401 aaKnown RBP9.8□□□□□ -0.84
CNKSR3-202ENST00000433165 ONECUT3O60422 494 aaPredicted RBP9.8□□□□□ -0.84
CNKSR3-202ENST00000433165 NLRP6P59044 892 aa9.8□□□□□ -0.84
CNKSR3-202ENST00000433165 UPF1Q92900 1129 aaKnown RBP eCLIP9.8□□□□□ -0.84
CNKSR3-202ENST00000433165 PODXL2Q9NZ53 605 aa9.8□□□□□ -0.84
CNKSR3-202ENST00000433165 TTC21BQ7Z4L5 1316 aa9.8□□□□□ -0.84
CNKSR3-202ENST00000433165 PIK3C2AO00443 1686 aa9.8□□□□□ -0.84
CNKSR3-202ENST00000433165 EVA1CP58658 441 aa9.79□□□□□ -0.84
CNKSR3-202ENST00000433165 GCP02774 474 aa9.79□□□□□ -0.84
CNKSR3-202ENST00000433165 USP31Q70CQ4 1352 aa9.79□□□□□ -0.84
CNKSR3-202ENST00000433165 THRAP3Q9Y2W1 955 aaKnown RBP9.79□□□□□ -0.84
CNKSR3-202ENST00000433165 LMO7Q8WWI1 1683 aa9.79□□□□□ -0.84
CNKSR3-202ENST00000433165 AATKQ6ZMQ8 1374 aa9.78□□□□□ -0.84
CNKSR3-202ENST00000433165 SPATA31A5Q5VU36 1347 aa9.78□□□□□ -0.84
CNKSR3-202ENST00000433165 SPATA31A7Q8IWB4 1347 aa9.78□□□□□ -0.84
CNKSR3-202ENST00000433165 PLEKHG5O94827 1062 aa9.78□□□□□ -0.84
CNKSR3-202ENST00000433165 RGS3P49796 1198 aa9.78□□□□□ -0.84
CNKSR3-202ENST00000433165 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.78□□□□□ -0.84
CNKSR3-202ENST00000433165 PANK2Q9BZ23 570 aa9.78□□□□□ -0.84
CNKSR3-202ENST00000433165 ST20-MTHFSA0A0A6YYL1 179 aa9.78□□□□□ -0.84
CNKSR3-202ENST00000433165 PER1O15534 1290 aaPredicted RBP9.78□□□□□ -0.84
CNKSR3-202ENST00000433165 TPM2P07951 284 aa9.78□□□□□ -0.84
CNKSR3-202ENST00000433165 SF3B2Q13435 895 aaKnown RBP9.78□□□□□ -0.84
CNKSR3-202ENST00000433165 MRE11P49959 708 aa9.77□□□□□ -0.85
CNKSR3-202ENST00000433165 DUSP27Q5VZP5 1158 aa9.77□□□□□ -0.85
CNKSR3-202ENST00000433165 SEPT12Q8IYM1 358 aa9.77□□□□□ -0.85
CNKSR3-202ENST00000433165 PDCL3Q9H2J4 239 aa9.77□□□□□ -0.85
CNKSR3-202ENST00000433165 ISY1Q9ULR0 285 aaKnown RBP9.77□□□□□ -0.85
CNKSR3-202ENST00000433165 THSD7AQ9UPZ6 1657 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms