RNA–Protein interactions for RNA: ENST00000428413.5

SCAP-206, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 3,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-206ENST00000428413 YEATS2Q9ULM3 1422 aa18.52■□□□□ 0.56
SCAP-206ENST00000428413 PRPF40AO75400 957 aaKnown RBP18.52■□□□□ 0.56
SCAP-206ENST00000428413 BCL11BQ9C0K0 894 aaPredicted RBP18.52■□□□□ 0.56
SCAP-206ENST00000428413 USP19O94966 1318 aa18.52■□□□□ 0.55
SCAP-206ENST00000428413 PREX2Q70Z35 1606 aa18.51■□□□□ 0.55
SCAP-206ENST00000428413 SURF6O75683 361 aaKnown RBP18.51■□□□□ 0.55
SCAP-206ENST00000428413 CSB-PGBD3P0DP91 1061 aa18.51■□□□□ 0.55
SCAP-206ENST00000428413 DNTTIP2Q5QJE6 756 aaKnown RBP18.51■□□□□ 0.55
SCAP-206ENST00000428413 TNPO1Q92973 898 aaKnown RBP18.51■□□□□ 0.55
SCAP-206ENST00000428413 ACEP12821 1306 aa18.51■□□□□ 0.55
SCAP-206ENST00000428413 INSRP06213 1382 aa18.51■□□□□ 0.55
SCAP-206ENST00000428413 HAP1P54257 671 aaPredicted RBP18.5■□□□□ 0.55
SCAP-206ENST00000428413 EIF4A2Q14240 407 aaKnown RBP18.5■□□□□ 0.55
SCAP-206ENST00000428413 MRPL50Q8N5N7 158 aaKnown RBP18.5■□□□□ 0.55
SCAP-206ENST00000428413 TEFQ10587 303 aa18.49■□□□□ 0.55
SCAP-206ENST00000428413 PSME1Q06323 249 aa18.49■□□□□ 0.55
SCAP-206ENST00000428413 JARID2Q92833 1246 aaPredicted RBP18.49■□□□□ 0.55
SCAP-206ENST00000428413 ESCO1Q5FWF5 840 aa18.49■□□□□ 0.55
SCAP-206ENST00000428413 GDPD2Q9HCC8 539 aa18.49■□□□□ 0.55
SCAP-206ENST00000428413 RRP9O43818 475 aaKnown RBP18.48■□□□□ 0.55
SCAP-206ENST00000428413 ST18O60284 1047 aa18.48■□□□□ 0.55
SCAP-206ENST00000428413 NUCB1Q02818 461 aa18.48■□□□□ 0.55
SCAP-206ENST00000428413 PLEKHF1Q96S99 279 aa18.48■□□□□ 0.55
SCAP-206ENST00000428413 ZBTB7BO15156 539 aaPredicted RBP18.48■□□□□ 0.55
SCAP-206ENST00000428413 CD2BP2O95400 341 aaKnown RBP18.48■□□□□ 0.55
SCAP-206ENST00000428413 CCDC27Q2M243 656 aa18.48■□□□□ 0.55
SCAP-206ENST00000428413 EIF2AK4Q9P2K8 1649 aaKnown RBP18.48■□□□□ 0.55
SCAP-206ENST00000428413 CFAP44Q96MT7 982 aa18.48■□□□□ 0.55
SCAP-206ENST00000428413 MYO5CQ9NQX4 1742 aa18.48■□□□□ 0.55
SCAP-206ENST00000428413 GCC1Q96CN9 775 aa18.47■□□□□ 0.55
SCAP-206ENST00000428413 AMOTL2Q9Y2J4 779 aa18.47■□□□□ 0.55
SCAP-206ENST00000428413 ZNF518AQ6AHZ1 1483 aa18.47■□□□□ 0.55
SCAP-206ENST00000428413 FOSBP53539 338 aa18.47■□□□□ 0.55
SCAP-206ENST00000428413 DDX11L8A8MPP1 907 aa18.47■□□□□ 0.55
SCAP-206ENST00000428413 SIL1Q9H173 461 aa18.47■□□□□ 0.55
SCAP-206ENST00000428413 XRCC6P12956 609 aaKnown RBP eCLIP18.46■□□□□ 0.55
SCAP-206ENST00000428413 FGD1P98174 961 aa18.46■□□□□ 0.55
SCAP-206ENST00000428413 HDGFL1Q5TGJ6 251 aa18.46■□□□□ 0.55
SCAP-206ENST00000428413 KIAA1211Q6ZU35 1233 aa18.46■□□□□ 0.55
SCAP-206ENST00000428413 GAS2L2Q8NHY3 880 aa18.46■□□□□ 0.55
SCAP-206ENST00000428413 K7ELQ4 463 aaPredicted RBP18.46■□□□□ 0.55
SCAP-206ENST00000428413 RBM10P98175 930 aaKnown RBP18.46■□□□□ 0.55
SCAP-206ENST00000428413 INTS3Q68E01 1043 aaKnown RBP18.46■□□□□ 0.55
SCAP-206ENST00000428413 CLTCL1P53675 1640 aa18.45■□□□□ 0.54
SCAP-206ENST00000428413 CROCC2H7BZ55 1655 aa18.45■□□□□ 0.54
SCAP-206ENST00000428413 PIP4K2AP48426 406 aaPredicted RBP18.45■□□□□ 0.54
SCAP-206ENST00000428413 C9orf78Q9NZ63 289 aaPredicted RBP18.45■□□□□ 0.54
SCAP-206ENST00000428413 SMC5Q8IY18 1101 aa18.45■□□□□ 0.54
SCAP-206ENST00000428413 HDAC1Q13547 482 aaPredicted RBP18.44■□□□□ 0.54
SCAP-206ENST00000428413 IFT57Q9NWB7 429 aa18.44■□□□□ 0.54
SCAP-206ENST00000428413 ABCC1P33527 1531 aa18.44■□□□□ 0.54
SCAP-206ENST00000428413 UBTFL1P0CB47 393 aaPredicted RBP18.43■□□□□ 0.54
SCAP-206ENST00000428413 ZC3H6P61129 1189 aaKnown RBP18.43■□□□□ 0.54
SCAP-206ENST00000428413 MTHFSDQ2M296 383 aaKnown RBP18.43■□□□□ 0.54
SCAP-206ENST00000428413 MPRIPQ6WCQ1 1025 aa18.43■□□□□ 0.54
SCAP-206ENST00000428413 PPFIA3O75145 1194 aa18.43■□□□□ 0.54
SCAP-206ENST00000428413 MCCP23508 829 aa18.43■□□□□ 0.54
SCAP-206ENST00000428413 SDSP20132 328 aa18.43■□□□□ 0.54
SCAP-206ENST00000428413 ZGPATQ8N5A5 531 aaKnown RBP18.43■□□□□ 0.54
SCAP-206ENST00000428413 RBM27Q9P2N5 1060 aaKnown RBP18.43■□□□□ 0.54
SCAP-206ENST00000428413 PDE4CQ08493 712 aa18.42■□□□□ 0.54
SCAP-206ENST00000428413 LRRFIP2Q9Y608 721 aaKnown RBP18.42■□□□□ 0.54
SCAP-206ENST00000428413 YTHDC2Q9H6S0 1430 aaKnown RBP18.42■□□□□ 0.54
SCAP-206ENST00000428413 ZCCHC11Q5TAX3 1644 aaKnown RBP18.42■□□□□ 0.54
SCAP-206ENST00000428413 MSNP26038 577 aaKnown RBP18.42■□□□□ 0.54
SCAP-206ENST00000428413 IL13P35225 146 aa18.42■□□□□ 0.54
SCAP-206ENST00000428413 ALDH1L2Q3SY69 923 aa18.42■□□□□ 0.54
SCAP-206ENST00000428413 NPC1L1Q9UHC9 1359 aa18.42■□□□□ 0.54
SCAP-206ENST00000428413 PPIP5K1Q6PFW1 1433 aa18.42■□□□□ 0.54
SCAP-206ENST00000428413 CT47B1P0C2W7 299 aaPredicted RBP18.41■□□□□ 0.54
SCAP-206ENST00000428413 GRPEL1Q9HAV7 217 aa18.41■□□□□ 0.54
SCAP-206ENST00000428413 NINLQ9Y2I6 1382 aa18.41■□□□□ 0.54
SCAP-206ENST00000428413 MYL6BP14649 208 aa18.4■□□□□ 0.54
SCAP-206ENST00000428413 GNAI2P04899 355 aa18.4■□□□□ 0.54
SCAP-206ENST00000428413 AAMPQ13685 434 aa18.4■□□□□ 0.54
SCAP-206ENST00000428413 REC8O95072 547 aa18.39■□□□□ 0.54
SCAP-206ENST00000428413 PKP1Q13835 747 aa18.39■□□□□ 0.54
SCAP-206ENST00000428413 SIRT2Q8IXJ6 389 aa18.39■□□□□ 0.54
SCAP-206ENST00000428413 SRGAP3O43295 1099 aa18.39■□□□□ 0.53
SCAP-206ENST00000428413 CWC27Q6UX04 472 aaKnown RBP18.39■□□□□ 0.53
SCAP-206ENST00000428413 ZNF692Q9BU19 519 aaPredicted RBP18.39■□□□□ 0.53
SCAP-206ENST00000428413 LRRC59Q96AG4 307 aaKnown RBP18.38■□□□□ 0.53
SCAP-206ENST00000428413 TTC21BQ7Z4L5 1316 aa18.38■□□□□ 0.53
SCAP-206ENST00000428413 BMP2KLQ5H9B9 411 aa18.38■□□□□ 0.53
SCAP-206ENST00000428413 KDM4AO75164 1064 aa18.37■□□□□ 0.53
SCAP-206ENST00000428413 PHAXQ9H814 394 aaKnown RBP18.37■□□□□ 0.53
SCAP-206ENST00000428413 NLRP2Q9NX02 1062 aa18.37■□□□□ 0.53
SCAP-206ENST00000428413 SYNMO15061 1565 aa18.37■□□□□ 0.53
SCAP-206ENST00000428413 PLEKHM2Q8IWE5 1019 aa18.37■□□□□ 0.53
SCAP-206ENST00000428413 TRPM2O94759 1503 aa18.37■□□□□ 0.53
SCAP-206ENST00000428413 ZFYVE16Q7Z3T8 1539 aa18.37■□□□□ 0.53
SCAP-206ENST00000428413 TAF7Q15545 349 aaPredicted RBP18.36■□□□□ 0.53
SCAP-206ENST00000428413 SPG7Q9UQ90 795 aa18.36■□□□□ 0.53
SCAP-206ENST00000428413 E9PCH4 1651 aa18.36■□□□□ 0.53
SCAP-206ENST00000428413 VPS37CA5D8V6 355 aaPredicted RBP18.36■□□□□ 0.53
SCAP-206ENST00000428413 NASPP49321 788 aaPredicted RBP18.36■□□□□ 0.53
SCAP-206ENST00000428413 RRAGDQ9NQL2 400 aaPredicted RBP18.36■□□□□ 0.53
SCAP-206ENST00000428413 FLIIQ13045 1269 aa18.35■□□□□ 0.53
SCAP-206ENST00000428413 FBXW7Q969H0 707 aa18.35■□□□□ 0.53
SCAP-206ENST00000428413 EYA1Q99502 592 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms