RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 QRICH2Q9H0J4 1663 aa10.42□□□□□ -0.74
LINC01049-201ENST00000426840 HSPA5P11021 654 aaKnown RBP10.42□□□□□ -0.74
LINC01049-201ENST00000426840 HSPA1LP34931 641 aa10.42□□□□□ -0.74
LINC01049-201ENST00000426840 EIF4G2P78344 907 aaKnown RBP eCLIP10.42□□□□□ -0.74
LINC01049-201ENST00000426840 DDX17Q92841 729 aaKnown RBP10.42□□□□□ -0.74
LINC01049-201ENST00000426840 CFAP44Q96MT7 982 aa10.42□□□□□ -0.74
LINC01049-201ENST00000426840 RGPD8O14715 1765 aaPredicted RBP10.42□□□□□ -0.74
LINC01049-201ENST00000426840 ANKARQ7Z5J8 1434 aa10.41□□□□□ -0.74
LINC01049-201ENST00000426840 ROBO1Q9Y6N7 1651 aa10.41□□□□□ -0.74
LINC01049-201ENST00000426840 SRPK2P78362 688 aaKnown RBP10.41□□□□□ -0.74
LINC01049-201ENST00000426840 TMEM92Q6UXU6 159 aa10.41□□□□□ -0.74
LINC01049-201ENST00000426840 TULP4Q9NRJ4 1543 aa10.41□□□□□ -0.74
LINC01049-201ENST00000426840 USP32Q8NFA0 1604 aa10.4□□□□□ -0.74
LINC01049-201ENST00000426840 PLEKHG3A1L390 1219 aa10.4□□□□□ -0.74
LINC01049-201ENST00000426840 FOXO3O43524 673 aa10.4□□□□□ -0.74
LINC01049-201ENST00000426840 PAXIP1Q6ZW49 1069 aaPredicted RBP10.4□□□□□ -0.74
LINC01049-201ENST00000426840 PMFBP1Q8TBY8 1022 aa10.4□□□□□ -0.74
LINC01049-201ENST00000426840 PUS7Q96PZ0 661 aaKnown RBP10.4□□□□□ -0.74
LINC01049-201ENST00000426840 ATP7BP35670 1465 aa10.38□□□□□ -0.75
LINC01049-201ENST00000426840 ZEB1P37275 1124 aaPredicted RBP10.38□□□□□ -0.75
LINC01049-201ENST00000426840 SPRYD3Q8NCJ5 442 aa10.38□□□□□ -0.75
LINC01049-201ENST00000426840 CABP1Q9NZU7 370 aa10.38□□□□□ -0.75
LINC01049-201ENST00000426840 SOS2Q07890 1332 aaPredicted RBP10.37□□□□□ -0.75
LINC01049-201ENST00000426840 TMF1P82094 1093 aa10.37□□□□□ -0.75
LINC01049-201ENST00000426840 KRT28Q7Z3Y7 464 aa10.37□□□□□ -0.75
LINC01049-201ENST00000426840 DISP3Q9P2K9 1392 aa10.37□□□□□ -0.75
LINC01049-201ENST00000426840 AHDC1Q5TGY3 1603 aaPredicted RBP10.36□□□□□ -0.75
LINC01049-201ENST00000426840 NPHP3Q7Z494 1330 aa10.36□□□□□ -0.75
LINC01049-201ENST00000426840 C11orf95C9JLR9 678 aaPredicted RBP10.36□□□□□ -0.75
LINC01049-201ENST00000426840 XPCQ01831 940 aaPredicted RBP10.36□□□□□ -0.75
LINC01049-201ENST00000426840 PSME1Q06323 249 aa10.36□□□□□ -0.75
LINC01049-201ENST00000426840 ACEP12821 1306 aa10.35□□□□□ -0.75
LINC01049-201ENST00000426840 PPIP5K1Q6PFW1 1433 aa10.35□□□□□ -0.75
LINC01049-201ENST00000426840 NGDNQ8NEJ9 315 aaKnown RBP10.35□□□□□ -0.75
LINC01049-201ENST00000426840 LRRC59Q96AG4 307 aaKnown RBP10.35□□□□□ -0.75
LINC01049-201ENST00000426840 FAM163AQ96GL9 167 aaPredicted RBP10.35□□□□□ -0.75
LINC01049-201ENST00000426840 SLC12A5Q9H2X9 1139 aa10.35□□□□□ -0.75
LINC01049-201ENST00000426840 NHSL1Q5SYE7 1610 aa10.35□□□□□ -0.75
LINC01049-201ENST00000426840 POLR3AO14802 1390 aaPredicted RBP10.35□□□□□ -0.75
LINC01049-201ENST00000426840 ATAD2Q6PL18 1390 aa10.35□□□□□ -0.75
LINC01049-201ENST00000426840 PHLPP1O60346 1717 aa10.34□□□□□ -0.75
LINC01049-201ENST00000426840 PXDNQ92626 1479 aa10.34□□□□□ -0.75
LINC01049-201ENST00000426840 KIF1AQ12756 1690 aa10.34□□□□□ -0.75
LINC01049-201ENST00000426840 TOPAZ1Q8N9V7 1692 aa10.34□□□□□ -0.75
LINC01049-201ENST00000426840 COL16A1Q07092 1604 aaPredicted RBP10.33□□□□□ -0.76
LINC01049-201ENST00000426840 CDCA8Q53HL2 280 aa10.33□□□□□ -0.76
LINC01049-201ENST00000426840 SPATA31A3Q5VYP0 1347 aa10.33□□□□□ -0.76
LINC01049-201ENST00000426840 C2orf72A6NCS6 295 aa10.32□□□□□ -0.76
LINC01049-201ENST00000426840 TMC2Q8TDI7 906 aa10.32□□□□□ -0.76
LINC01049-201ENST00000426840 TMC1Q8TDI8 760 aa10.32□□□□□ -0.76
LINC01049-201ENST00000426840 ITSN1Q15811 1721 aa10.32□□□□□ -0.76
LINC01049-201ENST00000426840 CPSF1Q10570 1443 aaKnown RBP10.32□□□□□ -0.76
LINC01049-201ENST00000426840 SBNO1A3KN83 1393 aa10.31□□□□□ -0.76
LINC01049-201ENST00000426840 JCADQ9P266 1359 aa10.31□□□□□ -0.76
LINC01049-201ENST00000426840 CD163L1Q9NR16 1453 aa10.3□□□□□ -0.76
LINC01049-201ENST00000426840 PNPLA6Q8IY17 1366 aa10.3□□□□□ -0.76
LINC01049-201ENST00000426840 SSH2Q76I76 1423 aa10.3□□□□□ -0.76
LINC01049-201ENST00000426840 USP6P35125 1406 aa10.29□□□□□ -0.76
LINC01049-201ENST00000426840 BRD4O60885 1362 aaPredicted RBP10.28□□□□□ -0.76
LINC01049-201ENST00000426840 NINLQ9Y2I6 1382 aa10.28□□□□□ -0.76
LINC01049-201ENST00000426840 TRPM3Q9HCF6 1732 aaPredicted RBP10.28□□□□□ -0.76
LINC01049-201ENST00000426840 HDGFL2Q7Z4V5 671 aaPredicted RBP10.28□□□□□ -0.76
LINC01049-201ENST00000426840 POLR3GLQ9BT43 218 aa10.28□□□□□ -0.76
LINC01049-201ENST00000426840 CARD14Q9BXL6 1004 aa10.28□□□□□ -0.76
LINC01049-201ENST00000426840 TERF2IPQ9NYB0 399 aa10.28□□□□□ -0.76
LINC01049-201ENST00000426840 KIF7Q2M1P5 1343 aa10.28□□□□□ -0.76
LINC01049-201ENST00000426840 TTC21BQ7Z4L5 1316 aa10.28□□□□□ -0.76
LINC01049-201ENST00000426840 KTN1Q86UP2 1357 aaKnown RBP10.27□□□□□ -0.76
LINC01049-201ENST00000426840 TNS3Q68CZ2 1445 aa10.27□□□□□ -0.77
LINC01049-201ENST00000426840 SNPHO15079 494 aa10.27□□□□□ -0.77
LINC01049-201ENST00000426840 LMOD2Q6P5Q4 547 aa10.27□□□□□ -0.77
LINC01049-201ENST00000426840 SPATA31A6Q5VVP1 1343 aa10.27□□□□□ -0.77
LINC01049-201ENST00000426840 WASHC2AQ641Q2 1341 aa10.27□□□□□ -0.77
LINC01049-201ENST00000426840 A0A1W2PP64 1363 aa10.26□□□□□ -0.77
LINC01049-201ENST00000426840 AKAP12Q02952 1782 aa10.26□□□□□ -0.77
LINC01049-201ENST00000426840 SHPRHQ149N8 1683 aa10.26□□□□□ -0.77
LINC01049-201ENST00000426840 KIF3CO14782 793 aa10.26□□□□□ -0.77
LINC01049-201ENST00000426840 ABTB2Q8N961 1025 aa10.26□□□□□ -0.77
LINC01049-201ENST00000426840 CABLES1Q8TDN4 633 aa10.26□□□□□ -0.77
LINC01049-201ENST00000426840 ARHGEF10O15013 1369 aa10.26□□□□□ -0.77
LINC01049-201ENST00000426840 ANKRD36BQ8N2N9 1353 aa10.26□□□□□ -0.77
LINC01049-201ENST00000426840 CCDC7Q96M83 1385 aa10.26□□□□□ -0.77
LINC01049-201ENST00000426840 ALS2Q96Q42 1657 aa10.25□□□□□ -0.77
LINC01049-201ENST00000426840 NUTM2BA6NNL0 878 aaPredicted RBP10.25□□□□□ -0.77
LINC01049-201ENST00000426840 NUTM2EB1AL46 878 aaPredicted RBP10.25□□□□□ -0.77
LINC01049-201ENST00000426840 NUTM2GQ5VZR2 741 aa10.25□□□□□ -0.77
LINC01049-201ENST00000426840 NUTM2AQ8IVF1 878 aaPredicted RBP10.25□□□□□ -0.77
LINC01049-201ENST00000426840 TTC21AQ8NDW8 1320 aa10.25□□□□□ -0.77
LINC01049-201ENST00000426840 ST18O60284 1047 aa10.24□□□□□ -0.77
LINC01049-201ENST00000426840 HOXB3P14651 431 aaPredicted RBP10.24□□□□□ -0.77
LINC01049-201ENST00000426840 NLRP13Q86W25 1043 aa10.24□□□□□ -0.77
LINC01049-201ENST00000426840 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.24□□□□□ -0.77
LINC01049-201ENST00000426840 PANK3Q9H999 370 aa10.24□□□□□ -0.77
LINC01049-201ENST00000426840 COL22A1Q8NFW1 1626 aaPredicted RBP10.24□□□□□ -0.77
LINC01049-201ENST00000426840 MYOM1P52179 1685 aa10.24□□□□□ -0.77
LINC01049-201ENST00000426840 MON2Q7Z3U7 1717 aa10.24□□□□□ -0.77
LINC01049-201ENST00000426840 EDC4Q6P2E9 1401 aaKnown RBP10.24□□□□□ -0.77
LINC01049-201ENST00000426840 FYB1O15117 783 aa10.23□□□□□ -0.77
LINC01049-201ENST00000426840 LCE2DQ5TA82 110 aaPredicted RBP10.23□□□□□ -0.77
LINC01049-201ENST00000426840 NME9Q86XW9 330 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms