RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 ZNF784Q8NCA9 323 aaPredicted RBP9.5□□□□□ -0.89
NIF3L1-207ENST00000426253 CAMSAP2Q08AD1 1489 aa9.5□□□□□ -0.89
NIF3L1-207ENST00000426253 MYOM3Q5VTT5 1437 aa9.49□□□□□ -0.89
NIF3L1-207ENST00000426253 CCDC141Q6ZP82 1450 aa9.49□□□□□ -0.89
NIF3L1-207ENST00000426253 ZNF454Q8N9F8 522 aa9.49□□□□□ -0.89
NIF3L1-207ENST00000426253 CFAP65Q6ZU64 1925 aaKnown RBP9.48□□□□□ -0.89
NIF3L1-207ENST00000426253 SETD5Q9C0A6 1442 aa9.48□□□□□ -0.89
NIF3L1-207ENST00000426253 TTLL12Q14166 644 aaPredicted RBP9.48□□□□□ -0.89
NIF3L1-207ENST00000426253 R3HDM1Q15032 1099 aaKnown RBP9.48□□□□□ -0.89
NIF3L1-207ENST00000426253 BRINP3Q76B58 766 aa9.48□□□□□ -0.89
NIF3L1-207ENST00000426253 LRRC59Q96AG4 307 aaKnown RBP9.48□□□□□ -0.89
NIF3L1-207ENST00000426253 RBM27Q9P2N5 1060 aaKnown RBP9.48□□□□□ -0.89
NIF3L1-207ENST00000426253 MAST1Q9Y2H9 1570 aa9.48□□□□□ -0.89
NIF3L1-207ENST00000426253 ATRNO75882 1429 aa9.48□□□□□ -0.89
NIF3L1-207ENST00000426253 PLEKHG3A1L390 1219 aa9.47□□□□□ -0.89
NIF3L1-207ENST00000426253 ZNF710Q8N1W2 664 aa9.47□□□□□ -0.89
NIF3L1-207ENST00000426253 KHSRPQ92945 711 aaKnown RBP eCLIP9.47□□□□□ -0.89
NIF3L1-207ENST00000426253 TMUB1Q9BVT8 246 aa9.47□□□□□ -0.89
NIF3L1-207ENST00000426253 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.47□□□□□ -0.89
NIF3L1-207ENST00000426253 PNPLA6Q8IY17 1366 aa9.47□□□□□ -0.89
NIF3L1-207ENST00000426253 TMEM2Q9UHN6 1383 aa9.47□□□□□ -0.89
NIF3L1-207ENST00000426253 OATP04181 439 aa9.46□□□□□ -0.9
NIF3L1-207ENST00000426253 CLCN1P35523 988 aa9.46□□□□□ -0.9
NIF3L1-207ENST00000426253 ARHGEF5Q12774 1597 aa9.46□□□□□ -0.9
NIF3L1-207ENST00000426253 BAG6P46379 1132 aa9.45□□□□□ -0.9
NIF3L1-207ENST00000426253 FAM50AQ14320 339 aaKnown RBP9.45□□□□□ -0.9
NIF3L1-207ENST00000426253 GIGYF2Q6Y7W6 1299 aaKnown RBP9.45□□□□□ -0.9
NIF3L1-207ENST00000426253 TTC13Q8NBP0 860 aa9.45□□□□□ -0.9
NIF3L1-207ENST00000426253 ADAM33Q9BZ11 813 aa9.45□□□□□ -0.9
NIF3L1-207ENST00000426253 GOPCQ9HD26 462 aa9.45□□□□□ -0.9
NIF3L1-207ENST00000426253 RRP7BPQ9NSQ0 103 aa9.45□□□□□ -0.9
NIF3L1-207ENST00000426253 ASXL1Q8IXJ9 1541 aa9.45□□□□□ -0.9
NIF3L1-207ENST00000426253 UNC13BO14795 1591 aa9.45□□□□□ -0.9
NIF3L1-207ENST00000426253 TET3O43151 1660 aa9.45□□□□□ -0.9
NIF3L1-207ENST00000426253 SNPHO15079 494 aa9.44□□□□□ -0.9
NIF3L1-207ENST00000426253 PPARGC1BQ86YN6 1023 aaKnown RBP9.44□□□□□ -0.9
NIF3L1-207ENST00000426253 REPIN1Q9BWE0 567 aaKnown RBP9.44□□□□□ -0.9
NIF3L1-207ENST00000426253 PPP1R1BQ9UD71 204 aaPredicted RBP9.44□□□□□ -0.9
NIF3L1-207ENST00000426253 CHIC2Q9UKJ5 165 aa9.44□□□□□ -0.9
NIF3L1-207ENST00000426253 PIK3C2BO00750 1634 aa9.44□□□□□ -0.9
NIF3L1-207ENST00000426253 MROH1Q8NDA8 1641 aa9.44□□□□□ -0.9
NIF3L1-207ENST00000426253 ABCC5O15440 1437 aa9.43□□□□□ -0.9
NIF3L1-207ENST00000426253 C19orf44Q9H6X5 657 aa9.43□□□□□ -0.9
NIF3L1-207ENST00000426253 GPCPD1Q9NPB8 672 aa9.43□□□□□ -0.9
NIF3L1-207ENST00000426253 PADI6Q6TGC4 694 aa9.42□□□□□ -0.9
NIF3L1-207ENST00000426253 FNBP4Q8N3X1 1017 aaPredicted RBP9.42□□□□□ -0.9
NIF3L1-207ENST00000426253 GJD4Q96KN9 370 aaPredicted RBP9.42□□□□□ -0.9
NIF3L1-207ENST00000426253 PHOX2BQ99453 314 aa9.42□□□□□ -0.9
NIF3L1-207ENST00000426253 LHX6Q9UPM6 363 aa9.42□□□□□ -0.9
NIF3L1-207ENST00000426253 CHD2O14647 1828 aaKnown RBP9.42□□□□□ -0.9
NIF3L1-207ENST00000426253 NCOA3Q9Y6Q9 1424 aa9.41□□□□□ -0.9
NIF3L1-207ENST00000426253 BRWD3Q6RI45 1802 aa9.41□□□□□ -0.9
NIF3L1-207ENST00000426253 MS4A1P11836 297 aa9.41□□□□□ -0.9
NIF3L1-207ENST00000426253 PRSS12P56730 875 aa9.41□□□□□ -0.9
NIF3L1-207ENST00000426253 PPP4R3BQ5MIZ7 849 aa9.41□□□□□ -0.9
NIF3L1-207ENST00000426253 METTL3Q86U44 580 aaKnown RBP9.41□□□□□ -0.9
NIF3L1-207ENST00000426253 DDX17Q92841 729 aaKnown RBP9.41□□□□□ -0.9
NIF3L1-207ENST00000426253 ADGRG1Q9Y653 693 aa9.41□□□□□ -0.9
NIF3L1-207ENST00000426253 CEP152O94986 1710 aa9.41□□□□□ -0.9
NIF3L1-207ENST00000426253 CAMTA1Q9Y6Y1 1673 aa9.41□□□□□ -0.9
NIF3L1-207ENST00000426253 EFCAB6Q5THR3 1501 aa9.41□□□□□ -0.9
NIF3L1-207ENST00000426253 PXYLP1Q8TE99 480 aa9.4□□□□□ -0.9
NIF3L1-207ENST00000426253 BCL2L12Q9HB09 334 aa9.4□□□□□ -0.9
NIF3L1-207ENST00000426253 PTPN23Q9H3S7 1636 aa9.4□□□□□ -0.9
NIF3L1-207ENST00000426253 DAPK1P53355 1430 aa9.39□□□□□ -0.91
NIF3L1-207ENST00000426253 HOXB1P14653 301 aaPredicted RBP9.39□□□□□ -0.91
NIF3L1-207ENST00000426253 SSTR3P32745 418 aaPredicted RBP9.39□□□□□ -0.91
NIF3L1-207ENST00000426253 MDM2Q00987 491 aaPredicted RBP9.39□□□□□ -0.91
NIF3L1-207ENST00000426253 CDCA7LQ96GN5 454 aa9.39□□□□□ -0.91
NIF3L1-207ENST00000426253 SPHKAPQ2M3C7 1700 aa9.39□□□□□ -0.91
NIF3L1-207ENST00000426253 PTCH1Q13635 1447 aa9.39□□□□□ -0.91
NIF3L1-207ENST00000426253 ANKRD30AQ9BXX3 1397 aa9.38□□□□□ -0.91
NIF3L1-207ENST00000426253 KIF15Q9NS87 1388 aa9.38□□□□□ -0.91
NIF3L1-207ENST00000426253 GIGYF1O75420 1035 aaPredicted RBP9.38□□□□□ -0.91
NIF3L1-207ENST00000426253 DUOX2Q9NRD8 1548 aa9.37□□□□□ -0.91
NIF3L1-207ENST00000426253 FAM161AQ3B820 660 aa9.37□□□□□ -0.91
NIF3L1-207ENST00000426253 RBM46Q8TBY0 533 aaKnown RBP9.37□□□□□ -0.91
NIF3L1-207ENST00000426253 NINLQ9Y2I6 1382 aa9.37□□□□□ -0.91
NIF3L1-207ENST00000426253 ITGAEP38570 1179 aa9.36□□□□□ -0.91
NIF3L1-207ENST00000426253 FAM217BQ9NTX9 383 aaPredicted RBP9.36□□□□□ -0.91
NIF3L1-207ENST00000426253 RALGAPBQ86X10 1494 aa9.35□□□□□ -0.91
NIF3L1-207ENST00000426253 PPP1R15AO75807 674 aaPredicted RBP9.35□□□□□ -0.91
NIF3L1-207ENST00000426253 GLI3P10071 1580 aa9.35□□□□□ -0.91
NIF3L1-207ENST00000426253 PTPREP23469 700 aa9.35□□□□□ -0.91
NIF3L1-207ENST00000426253 SEPT12Q8IYM1 358 aa9.35□□□□□ -0.91
NIF3L1-207ENST00000426253 RSPH6AQ9H0K4 717 aa9.35□□□□□ -0.91
NIF3L1-207ENST00000426253 CEP350Q5VT06 3117 aa9.35□□□□□ -0.91
NIF3L1-207ENST00000426253 PPP1R3GB7ZBB8 358 aa9.34□□□□□ -0.91
NIF3L1-207ENST00000426253 COL9A1P20849 921 aa9.34□□□□□ -0.91
NIF3L1-207ENST00000426253 KRT27Q7Z3Y8 459 aa9.34□□□□□ -0.91
NIF3L1-207ENST00000426253 KANK1Q14678 1352 aa9.34□□□□□ -0.91
NIF3L1-207ENST00000426253 MST1RQ04912 1400 aa9.33□□□□□ -0.92
NIF3L1-207ENST00000426253 ERBINQ96RT1 1412 aa9.33□□□□□ -0.92
NIF3L1-207ENST00000426253 A0A0G2JS52 829 aa9.33□□□□□ -0.92
NIF3L1-207ENST00000426253 MYT1Q01538 1121 aa9.33□□□□□ -0.92
NIF3L1-207ENST00000426253 SH3D19Q5HYK7 790 aa9.33□□□□□ -0.92
NIF3L1-207ENST00000426253 PCMTD1Q96MG8 357 aaPredicted RBP9.33□□□□□ -0.92
NIF3L1-207ENST00000426253 DCCP43146 1447 aa9.32□□□□□ -0.92
NIF3L1-207ENST00000426253 RGPD1P0DJD0 1748 aa9.32□□□□□ -0.92
NIF3L1-207ENST00000426253 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms