RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 HDGFL2Q7Z4V5 671 aaPredicted RBP16.97■□□□□ 0.31
USP42-203ENST00000426246 CCDC61Q9Y6R9 512 aa16.97■□□□□ 0.31
USP42-203ENST00000426246 RUNDC1Q96C34 613 aa16.96■□□□□ 0.31
USP42-203ENST00000426246 FMN2Q9NZ56 1722 aa16.96■□□□□ 0.31
USP42-203ENST00000426246 RIPK4P57078 832 aa16.95■□□□□ 0.3
USP42-203ENST00000426246 IQSEC2Q5JU85 1478 aa16.95■□□□□ 0.3
USP42-203ENST00000426246 MAP2P11137 1827 aaKnown RBP16.95■□□□□ 0.3
USP42-203ENST00000426246 RWDD1Q9H446 243 aaPredicted RBP16.95■□□□□ 0.3
USP42-203ENST00000426246 KCNA6P17658 529 aa16.94■□□□□ 0.3
USP42-203ENST00000426246 RARSP54136 660 aaKnown RBP16.94■□□□□ 0.3
USP42-203ENST00000426246 ANKLE2Q86XL3 938 aa16.94■□□□□ 0.3
USP42-203ENST00000426246 USP35Q9P2H5 1018 aa16.94■□□□□ 0.3
USP42-203ENST00000426246 PNPLA6Q8IY17 1366 aa16.94■□□□□ 0.3
USP42-203ENST00000426246 NCLP19338 710 aaKnown RBP16.94■□□□□ 0.3
USP42-203ENST00000426246 SSH2Q76I76 1423 aa16.93■□□□□ 0.3
USP42-203ENST00000426246 KDM2BQ8NHM5 1336 aa16.93■□□□□ 0.3
USP42-203ENST00000426246 NWD1Q149M9 1564 aa16.92■□□□□ 0.3
USP42-203ENST00000426246 DZIP1LQ8IYY4 767 aaKnown RBP16.92■□□□□ 0.3
USP42-203ENST00000426246 PLEKHG3A1L390 1219 aa16.92■□□□□ 0.3
USP42-203ENST00000426246 FOXD4L5Q5VV16 416 aaPredicted RBP16.91■□□□□ 0.3
USP42-203ENST00000426246 FOXD4L4Q8WXT5 416 aaPredicted RBP16.91■□□□□ 0.3
USP42-203ENST00000426246 ZKSCAN2Q63HK3 967 aa16.91■□□□□ 0.3
USP42-203ENST00000426246 NPHP4O75161 1426 aaPredicted RBP16.91■□□□□ 0.3
USP42-203ENST00000426246 ANKRD45Q5TZF3 282 aa16.91■□□□□ 0.3
USP42-203ENST00000426246 MYH16Q9H6N6 1097 aa16.91■□□□□ 0.3
USP42-203ENST00000426246 NOB1Q9ULX3 412 aaKnown RBP16.91■□□□□ 0.3
USP42-203ENST00000426246 PMFBP1Q8TBY8 1022 aa16.9■□□□□ 0.3
USP42-203ENST00000426246 USP6P35125 1406 aa16.89■□□□□ 0.29
USP42-203ENST00000426246 MARF1Q9Y4F3 1742 aaKnown RBP16.89■□□□□ 0.29
USP42-203ENST00000426246 HSP90AB1P08238 724 aaKnown RBP16.88■□□□□ 0.29
USP42-203ENST00000426246 NME9Q86XW9 330 aa16.88■□□□□ 0.29
USP42-203ENST00000426246 SSH1Q8WYL5 1049 aa16.88■□□□□ 0.29
USP42-203ENST00000426246 ZRANB1Q9UGI0 708 aa16.88■□□□□ 0.29
USP42-203ENST00000426246 DCTN1Q14203 1278 aa16.87■□□□□ 0.29
USP42-203ENST00000426246 NOL8Q76FK4 1167 aaKnown RBP16.87■□□□□ 0.29
USP42-203ENST00000426246 ZNF428Q96B54 188 aa16.87■□□□□ 0.29
USP42-203ENST00000426246 ACEP12821 1306 aa16.87■□□□□ 0.29
USP42-203ENST00000426246 ANKARQ7Z5J8 1434 aa16.87■□□□□ 0.29
USP42-203ENST00000426246 FOXD4L6Q3SYB3 417 aaPredicted RBP16.87■□□□□ 0.29
USP42-203ENST00000426246 FOXD4L3Q6VB84 417 aaPredicted RBP16.87■□□□□ 0.29
USP42-203ENST00000426246 ZNF692Q9BU19 519 aaPredicted RBP16.87■□□□□ 0.29
USP42-203ENST00000426246 OVOS2A0A0J9YW53 1432 aa16.86■□□□□ 0.29
USP42-203ENST00000426246 OVOS2Q6IE36 1432 aa16.86■□□□□ 0.29
USP42-203ENST00000426246 AATKQ6ZMQ8 1374 aa16.86■□□□□ 0.29
USP42-203ENST00000426246 NECTIN2Q92692 538 aa16.86■□□□□ 0.29
USP42-203ENST00000426246 PIK3C2AO00443 1686 aa16.86■□□□□ 0.29
USP42-203ENST00000426246 POLKQ9UBT6 870 aa16.85■□□□□ 0.29
USP42-203ENST00000426246 USP54Q70EL1 1684 aa16.85■□□□□ 0.29
USP42-203ENST00000426246 TMEM57Q8N5G2 664 aa16.85■□□□□ 0.29
USP42-203ENST00000426246 NAP1L5Q96NT1 182 aaPredicted RBP16.85■□□□□ 0.29
USP42-203ENST00000426246 TRMT2AQ8IZ69 625 aaKnown RBP16.85■□□□□ 0.29
USP42-203ENST00000426246 PHF23Q9BUL5 403 aaPredicted RBP16.85■□□□□ 0.29
USP42-203ENST00000426246 C22orf23Q9BZE7 217 aa16.85■□□□□ 0.29
USP42-203ENST00000426246 HSCBQ8IWL3 235 aa16.84■□□□□ 0.29
USP42-203ENST00000426246 TBC1D2Q9BYX2 928 aa16.84■□□□□ 0.29
USP42-203ENST00000426246 STRCP1A6NGW2 1772 aa16.84■□□□□ 0.29
USP42-203ENST00000426246 PDE3AQ14432 1141 aa16.84■□□□□ 0.29
USP42-203ENST00000426246 PRKAR2BP31323 418 aa16.83■□□□□ 0.29
USP42-203ENST00000426246 CDK12Q9NYV4 1490 aaPredicted RBP16.83■□□□□ 0.28
USP42-203ENST00000426246 TTC21BQ7Z4L5 1316 aa16.83■□□□□ 0.28
USP42-203ENST00000426246 PEAK1Q9H792 1746 aa16.83■□□□□ 0.28
USP42-203ENST00000426246 TRIM27P14373 513 aa16.83■□□□□ 0.28
USP42-203ENST00000426246 C14orf37Q86TY3 774 aa16.83■□□□□ 0.28
USP42-203ENST00000426246 PLEKHF1Q96S99 279 aa16.83■□□□□ 0.28
USP42-203ENST00000426246 ADGRL3Q9HAR2 1447 aa16.82■□□□□ 0.28
USP42-203ENST00000426246 RRS1Q15050 365 aaKnown RBP16.81■□□□□ 0.28
USP42-203ENST00000426246 SLC4A10Q6U841 1118 aa16.81■□□□□ 0.28
USP42-203ENST00000426246 ARID3AQ99856 593 aa16.81■□□□□ 0.28
USP42-203ENST00000426246 MVPQ14764 893 aaKnown RBP16.81■□□□□ 0.28
USP42-203ENST00000426246 USP31Q70CQ4 1352 aa16.8■□□□□ 0.28
USP42-203ENST00000426246 DIAPH1O60610 1272 aaKnown RBP16.8■□□□□ 0.28
USP42-203ENST00000426246 PANK2Q9BZ23 570 aa16.8■□□□□ 0.28
USP42-203ENST00000426246 TMPOP42166 694 aaKnown RBP16.8■□□□□ 0.28
USP42-203ENST00000426246 FAM83GA6ND36 823 aa16.79■□□□□ 0.28
USP42-203ENST00000426246 LRRC7Q96NW7 1537 aa16.79■□□□□ 0.28
USP42-203ENST00000426246 NGEFQ8N5V2 710 aa16.79■□□□□ 0.28
USP42-203ENST00000426246 EMILIN1Q9Y6C2 1016 aa16.79■□□□□ 0.28
USP42-203ENST00000426246 RBM33Q96EV2 1170 aaKnown RBP16.78■□□□□ 0.28
USP42-203ENST00000426246 RBM42Q9BTD8 480 aaKnown RBP16.78■□□□□ 0.28
USP42-203ENST00000426246 MIS18AQ9NYP9 233 aa16.78■□□□□ 0.28
USP42-203ENST00000426246 KDM4FA0A1W2PPD8 638 aa16.78■□□□□ 0.28
USP42-203ENST00000426246 NCBP3Q53F19 620 aaKnown RBP16.77■□□□□ 0.28
USP42-203ENST00000426246 RGPD1P0DJD0 1748 aa16.77■□□□□ 0.28
USP42-203ENST00000426246 COG3Q96JB2 828 aa16.77■□□□□ 0.27
USP42-203ENST00000426246 STRCQ7RTU9 1775 aa16.77■□□□□ 0.27
USP42-203ENST00000426246 GOLGA6L3A6NEY3 463 aa16.76■□□□□ 0.27
USP42-203ENST00000426246 CCDC27Q2M243 656 aa16.76■□□□□ 0.27
USP42-203ENST00000426246 LMTK3Q96Q04 1460 aa16.76■□□□□ 0.27
USP42-203ENST00000426246 ATF7IPQ6VMQ6 1270 aa16.75■□□□□ 0.27
USP42-203ENST00000426246 IL13P35225 146 aa16.75■□□□□ 0.27
USP42-203ENST00000426246 KRT24Q2M2I5 525 aa16.75■□□□□ 0.27
USP42-203ENST00000426246 TTC21AQ8NDW8 1320 aa16.75■□□□□ 0.27
USP42-203ENST00000426246 TSPYL6Q8N831 410 aa16.75■□□□□ 0.27
USP42-203ENST00000426246 PRKCSHP14314 528 aaPredicted RBP16.74■□□□□ 0.27
USP42-203ENST00000426246 LTV1Q96GA3 475 aaPredicted RBP16.74■□□□□ 0.27
USP42-203ENST00000426246 NUTM2GQ5VZR2 741 aa16.74■□□□□ 0.27
USP42-203ENST00000426246 DDX19BQ9UMR2 479 aa16.73■□□□□ 0.27
USP42-203ENST00000426246 IPO8O15397 1037 aaKnown RBP16.72■□□□□ 0.27
USP42-203ENST00000426246 RSPH6AQ9H0K4 717 aa16.72■□□□□ 0.27
USP42-203ENST00000426246 PHACTR3Q96KR7 559 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms