RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 TESK2Q96S53 571 aa8.07□□□□□ -1.12
HERPUD2-204ENST00000426180 C19orf44Q9H6X5 657 aa8.07□□□□□ -1.12
HERPUD2-204ENST00000426180 MSH6P52701 1360 aa8.07□□□□□ -1.12
HERPUD2-204ENST00000426180 NUTM2FA1L443 756 aa8.06□□□□□ -1.12
HERPUD2-204ENST00000426180 RGL2O15211 777 aa8.06□□□□□ -1.12
HERPUD2-204ENST00000426180 NUDT7P0C024 238 aa8.06□□□□□ -1.12
HERPUD2-204ENST00000426180 TMC2Q8TDI7 906 aa8.06□□□□□ -1.12
HERPUD2-204ENST00000426180 EIF3AQ14152 1382 aaKnown RBP8.06□□□□□ -1.12
HERPUD2-204ENST00000426180 TULP4Q9NRJ4 1543 aa8.05□□□□□ -1.12
HERPUD2-204ENST00000426180 UBAP1LF5GYI3 381 aa8.05□□□□□ -1.12
HERPUD2-204ENST00000426180 WASLO00401 505 aaPredicted RBP8.05□□□□□ -1.12
HERPUD2-204ENST00000426180 ZEB1P37275 1124 aaPredicted RBP8.05□□□□□ -1.12
HERPUD2-204ENST00000426180 CDK19Q9BWU1 502 aa8.05□□□□□ -1.12
HERPUD2-204ENST00000426180 IQSEC2Q5JU85 1478 aa8.05□□□□□ -1.12
HERPUD2-204ENST00000426180 QRICH2Q9H0J4 1663 aa8.05□□□□□ -1.12
HERPUD2-204ENST00000426180 PRR36Q9H6K5 1346 aa8.04□□□□□ -1.12
HERPUD2-204ENST00000426180 MST1RQ04912 1400 aa8.04□□□□□ -1.12
HERPUD2-204ENST00000426180 SLC34A2O95436 690 aa8.04□□□□□ -1.12
HERPUD2-204ENST00000426180 ATF3P18847 181 aa8.04□□□□□ -1.12
HERPUD2-204ENST00000426180 EIF4G2P78344 907 aaKnown RBP eCLIP8.04□□□□□ -1.12
HERPUD2-204ENST00000426180 LSM11P83369 360 aaKnown RBP eCLIP8.04□□□□□ -1.12
HERPUD2-204ENST00000426180 SLAIN2Q9P270 581 aa8.04□□□□□ -1.12
HERPUD2-204ENST00000426180 PCDHGA4Q9Y5G9 962 aa8.04□□□□□ -1.12
HERPUD2-204ENST00000426180 ADGRB2O60241 1585 aa8.04□□□□□ -1.12
HERPUD2-204ENST00000426180 CDC42BPGQ6DT37 1551 aa8.04□□□□□ -1.12
HERPUD2-204ENST00000426180 DCCP43146 1447 aa8.03□□□□□ -1.12
HERPUD2-204ENST00000426180 C1orf167Q5SNV9 1468 aa8.03□□□□□ -1.12
HERPUD2-204ENST00000426180 DISP3Q9P2K9 1392 aa8.03□□□□□ -1.12
HERPUD2-204ENST00000426180 C11orf95C9JLR9 678 aaPredicted RBP8.03□□□□□ -1.12
HERPUD2-204ENST00000426180 PIP4K2BP78356 416 aa8.03□□□□□ -1.12
HERPUD2-204ENST00000426180 CADPS2Q86UW7 1296 aa8.03□□□□□ -1.12
HERPUD2-204ENST00000426180 ORAI2Q96SN7 254 aa8.03□□□□□ -1.12
HERPUD2-204ENST00000426180 LHX6Q9UPM6 363 aa8.03□□□□□ -1.12
HERPUD2-204ENST00000426180 SBNO2Q9Y2G9 1366 aa8.02□□□□□ -1.13
HERPUD2-204ENST00000426180 TOM1O60784 492 aa8.02□□□□□ -1.13
HERPUD2-204ENST00000426180 PBX2P40425 430 aa8.02□□□□□ -1.13
HERPUD2-204ENST00000426180 NUDT16Q96DE0 195 aaKnown RBP8.02□□□□□ -1.13
HERPUD2-204ENST00000426180 USP32Q8NFA0 1604 aa8.02□□□□□ -1.13
HERPUD2-204ENST00000426180 EVC2Q86UK5 1308 aa8.02□□□□□ -1.13
HERPUD2-204ENST00000426180 FMN2Q9NZ56 1722 aa8.01□□□□□ -1.13
HERPUD2-204ENST00000426180 SRPK2P78362 688 aaKnown RBP8.01□□□□□ -1.13
HERPUD2-204ENST00000426180 ESCO1Q5FWF5 840 aa8.01□□□□□ -1.13
HERPUD2-204ENST00000426180 BRINP3Q76B58 766 aa8.01□□□□□ -1.13
HERPUD2-204ENST00000426180 DDX17Q92841 729 aaKnown RBP8.01□□□□□ -1.13
HERPUD2-204ENST00000426180 ATP7BP35670 1465 aa8□□□□□ -1.13
HERPUD2-204ENST00000426180 PPP1R37O75864 691 aa8□□□□□ -1.13
HERPUD2-204ENST00000426180 ANKARQ7Z5J8 1434 aa8□□□□□ -1.13
HERPUD2-204ENST00000426180 TMF1P82094 1093 aa7.99□□□□□ -1.13
HERPUD2-204ENST00000426180 PMFBP1Q8TBY8 1022 aa7.99□□□□□ -1.13
HERPUD2-204ENST00000426180 CABP1Q9NZU7 370 aa7.99□□□□□ -1.13
HERPUD2-204ENST00000426180 AXIN2Q9Y2T1 843 aa7.99□□□□□ -1.13
HERPUD2-204ENST00000426180 ROBO1Q9Y6N7 1651 aa7.98□□□□□ -1.13
HERPUD2-204ENST00000426180 XPCQ01831 940 aaPredicted RBP7.98□□□□□ -1.13
HERPUD2-204ENST00000426180 FBXO41Q8TF61 875 aa7.98□□□□□ -1.13
HERPUD2-204ENST00000426180 POLR3GLQ9BT43 218 aa7.98□□□□□ -1.13
HERPUD2-204ENST00000426180 PPIP5K1Q6PFW1 1433 aa7.97□□□□□ -1.13
HERPUD2-204ENST00000426180 PLEKHG3A1L390 1219 aa7.97□□□□□ -1.13
HERPUD2-204ENST00000426180 FOXO3O43524 673 aa7.97□□□□□ -1.13
HERPUD2-204ENST00000426180 HSPA1LP34931 641 aa7.97□□□□□ -1.13
HERPUD2-204ENST00000426180 POTEEQ6S8J3 1075 aa7.97□□□□□ -1.13
HERPUD2-204ENST00000426180 SLC12A5Q9H2X9 1139 aa7.97□□□□□ -1.13
HERPUD2-204ENST00000426180 TOPAZ1Q8N9V7 1692 aa7.97□□□□□ -1.13
HERPUD2-204ENST00000426180 ACEP12821 1306 aa7.97□□□□□ -1.13
HERPUD2-204ENST00000426180 KIF7Q2M1P5 1343 aa7.97□□□□□ -1.13
HERPUD2-204ENST00000426180 RGPD8O14715 1765 aaPredicted RBP7.97□□□□□ -1.13
HERPUD2-204ENST00000426180 CD163L1Q9NR16 1453 aa7.96□□□□□ -1.13
HERPUD2-204ENST00000426180 TMC1Q8TDI8 760 aa7.96□□□□□ -1.14
HERPUD2-204ENST00000426180 PUS7Q96PZ0 661 aaKnown RBP7.96□□□□□ -1.14
HERPUD2-204ENST00000426180 WASHC2AQ641Q2 1341 aa7.96□□□□□ -1.14
HERPUD2-204ENST00000426180 ATAD2Q6PL18 1390 aa7.96□□□□□ -1.14
HERPUD2-204ENST00000426180 PSDA5PKW4 1024 aaPredicted RBP7.95□□□□□ -1.14
HERPUD2-204ENST00000426180 NGDNQ8NEJ9 315 aaKnown RBP7.95□□□□□ -1.14
HERPUD2-204ENST00000426180 POLR3AO14802 1390 aaPredicted RBP7.95□□□□□ -1.14
HERPUD2-204ENST00000426180 CCDC7Q96M83 1385 aa7.95□□□□□ -1.14
HERPUD2-204ENST00000426180 PXDNQ92626 1479 aa7.94□□□□□ -1.14
HERPUD2-204ENST00000426180 AHDC1Q5TGY3 1603 aaPredicted RBP7.94□□□□□ -1.14
HERPUD2-204ENST00000426180 ARHGAP33O14559 1287 aa7.94□□□□□ -1.14
HERPUD2-204ENST00000426180 SLC24A1O60721 1099 aa7.94□□□□□ -1.14
HERPUD2-204ENST00000426180 KRT28Q7Z3Y7 464 aa7.94□□□□□ -1.14
HERPUD2-204ENST00000426180 PTCD2Q8WV60 388 aaKnown RBP7.94□□□□□ -1.14
HERPUD2-204ENST00000426180 SOS2Q07890 1332 aaPredicted RBP7.94□□□□□ -1.14
HERPUD2-204ENST00000426180 CPSF1Q10570 1443 aaKnown RBP7.94□□□□□ -1.14
HERPUD2-204ENST00000426180 NHSL1Q5SYE7 1610 aa7.93□□□□□ -1.14
HERPUD2-204ENST00000426180 MYOM1P52179 1685 aa7.93□□□□□ -1.14
HERPUD2-204ENST00000426180 KIF1AQ12756 1690 aa7.93□□□□□ -1.14
HERPUD2-204ENST00000426180 FOXK1P85037 733 aa7.93□□□□□ -1.14
HERPUD2-204ENST00000426180 PSME1Q06323 249 aa7.93□□□□□ -1.14
HERPUD2-204ENST00000426180 CDCA8Q53HL2 280 aa7.93□□□□□ -1.14
HERPUD2-204ENST00000426180 CARD14Q9BXL6 1004 aa7.93□□□□□ -1.14
HERPUD2-204ENST00000426180 NPHP3Q7Z494 1330 aa7.93□□□□□ -1.14
HERPUD2-204ENST00000426180 A0A1W2PP64 1363 aa7.93□□□□□ -1.14
HERPUD2-204ENST00000426180 COL16A1Q07092 1604 aaPredicted RBP7.92□□□□□ -1.14
HERPUD2-204ENST00000426180 PLPP6Q8IY26 295 aa7.92□□□□□ -1.14
HERPUD2-204ENST00000426180 KTN1Q86UP2 1357 aaKnown RBP7.92□□□□□ -1.14
HERPUD2-204ENST00000426180 USP6P35125 1406 aa7.92□□□□□ -1.14
HERPUD2-204ENST00000426180 SSH2Q76I76 1423 aa7.92□□□□□ -1.14
HERPUD2-204ENST00000426180 PHLPP1O60346 1717 aa7.92□□□□□ -1.14
HERPUD2-204ENST00000426180 ITSN1Q15811 1721 aa7.92□□□□□ -1.14
HERPUD2-204ENST00000426180 NUTM2GQ5VZR2 741 aa7.91□□□□□ -1.14
HERPUD2-204ENST00000426180 ADGRD1Q6QNK2 874 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms