RNA–Protein interactions for RNA: ENST00000425020.6

VPS37A-202, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37A, Length 4,051 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-202ENST00000425020 KIF14Q15058 1648 aa12.38□□□□□ -0.43
VPS37A-202ENST00000425020 TRAPPC8Q9Y2L5 1435 aa12.38□□□□□ -0.43
VPS37A-202ENST00000425020 SYCE3A1L190 88 aa12.38□□□□□ -0.43
VPS37A-202ENST00000425020 RUFY2Q8WXA3 655 aa12.38□□□□□ -0.43
VPS37A-202ENST00000425020 FAM177BA6PVY3 158 aa12.38□□□□□ -0.43
VPS37A-202ENST00000425020 C8orf58Q8NAV2 365 aa12.37□□□□□ -0.43
VPS37A-202ENST00000425020 HSP90AB2PQ58FF8 381 aa12.37□□□□□ -0.43
VPS37A-202ENST00000425020 ATP6V1DQ9Y5K8 247 aa12.37□□□□□ -0.43
VPS37A-202ENST00000425020 CCDC85AQ96PX6 553 aaPredicted RBP12.37□□□□□ -0.43
VPS37A-202ENST00000425020 GOLGA6L19H0YKK7 550 aa12.37□□□□□ -0.43
VPS37A-202ENST00000425020 FMNL2Q96PY5 1086 aa12.37□□□□□ -0.43
VPS37A-202ENST00000425020 SYCP2Q9BX26 1530 aa12.36□□□□□ -0.43
VPS37A-202ENST00000425020 ADGRL1O94910 1474 aa12.36□□□□□ -0.43
VPS37A-202ENST00000425020 RAPGEF4Q8WZA2 1011 aa12.36□□□□□ -0.43
VPS37A-202ENST00000425020 MEIS3Q99687 375 aa12.36□□□□□ -0.43
VPS37A-202ENST00000425020 CT47B1P0C2W7 299 aaPredicted RBP12.36□□□□□ -0.43
VPS37A-202ENST00000425020 HDAC5Q9UQL6 1122 aa12.36□□□□□ -0.43
VPS37A-202ENST00000425020 ZC3H6P61129 1189 aaKnown RBP12.35□□□□□ -0.43
VPS37A-202ENST00000425020 ZNF530Q6P9A1 599 aaPredicted RBP12.35□□□□□ -0.43
VPS37A-202ENST00000425020 GAS2L2Q8NHY3 880 aa12.35□□□□□ -0.43
VPS37A-202ENST00000425020 RBM27Q9P2N5 1060 aaKnown RBP12.35□□□□□ -0.43
VPS37A-202ENST00000425020 TCOF1Q13428 1488 aaKnown RBP12.35□□□□□ -0.43
VPS37A-202ENST00000425020 ATAD2Q6PL18 1390 aa12.35□□□□□ -0.43
VPS37A-202ENST00000425020 HTATSF1O43719 755 aaKnown RBP12.35□□□□□ -0.43
VPS37A-202ENST00000425020 CSPP1Q1MSJ5 1256 aa12.35□□□□□ -0.43
VPS37A-202ENST00000425020 SRCIN1Q9C0H9 1055 aa12.35□□□□□ -0.43
VPS37A-202ENST00000425020 FAM135AQ9P2D6 1515 aa12.34□□□□□ -0.43
VPS37A-202ENST00000425020 CFAP43Q8NDM7 1665 aa12.34□□□□□ -0.43
VPS37A-202ENST00000425020 CHMP4AQ9BY43 222 aa12.34□□□□□ -0.43
VPS37A-202ENST00000425020 SPATA31E1Q6ZUB1 1445 aa12.34□□□□□ -0.43
VPS37A-202ENST00000425020 CNTROBQ8N137 903 aa12.34□□□□□ -0.43
VPS37A-202ENST00000425020 CCAR2Q8N163 923 aaKnown RBP12.34□□□□□ -0.43
VPS37A-202ENST00000425020 JARID2Q92833 1246 aaPredicted RBP12.34□□□□□ -0.43
VPS37A-202ENST00000425020 RAPGEF6Q8TEU7 1601 aa12.34□□□□□ -0.43
VPS37A-202ENST00000425020 RNF123Q5XPI4 1314 aa12.34□□□□□ -0.43
VPS37A-202ENST00000425020 DDX58O95786 925 aaKnown RBP12.33□□□□□ -0.43
VPS37A-202ENST00000425020 XRCC6P12956 609 aaKnown RBP eCLIP12.33□□□□□ -0.434e-6■■■■□ 25.4
VPS37A-202ENST00000425020 CDK11BP21127 795 aaKnown RBP12.33□□□□□ -0.43
VPS37A-202ENST00000425020 WASHC4Q2M389 1173 aa12.33□□□□□ -0.43
VPS37A-202ENST00000425020 ATP2B1P20020 1258 aa12.33□□□□□ -0.44
VPS37A-202ENST00000425020 IFT57Q9NWB7 429 aa12.33□□□□□ -0.44
VPS37A-202ENST00000425020 LRRFIP2Q9Y608 721 aaKnown RBP12.33□□□□□ -0.44
VPS37A-202ENST00000425020 FOXO3O43524 673 aa12.33□□□□□ -0.44
VPS37A-202ENST00000425020 NINLQ9Y2I6 1382 aa12.33□□□□□ -0.44
VPS37A-202ENST00000425020 CD109Q6YHK3 1445 aa12.33□□□□□ -0.44
VPS37A-202ENST00000425020 GTF2E1P29083 439 aaPredicted RBP12.32□□□□□ -0.44
VPS37A-202ENST00000425020 SPG7Q9UQ90 795 aa12.32□□□□□ -0.44
VPS37A-202ENST00000425020 CPLX1O14810 134 aa12.32□□□□□ -0.44
VPS37A-202ENST00000425020 RPGRIP1LQ68CZ1 1315 aa12.32□□□□□ -0.44
VPS37A-202ENST00000425020 PES1O00541 588 aaKnown RBP12.32□□□□□ -0.44
VPS37A-202ENST00000425020 RPAP2Q8IXW5 612 aaPredicted RBP12.32□□□□□ -0.44
VPS37A-202ENST00000425020 CCT4P50991 539 aaKnown RBP12.32□□□□□ -0.44
VPS37A-202ENST00000425020 TAF7Q15545 349 aaPredicted RBP12.32□□□□□ -0.44
VPS37A-202ENST00000425020 JAKMIP1Q96N16 626 aaKnown RBP12.32□□□□□ -0.44
VPS37A-202ENST00000425020 ZNF692Q9BU19 519 aaPredicted RBP12.32□□□□□ -0.44
VPS37A-202ENST00000425020 WDR62O43379 1518 aa12.31□□□□□ -0.44
VPS37A-202ENST00000425020 EVA1CP58658 441 aa12.31□□□□□ -0.44
VPS37A-202ENST00000425020 MPRIPQ6WCQ1 1025 aa12.31□□□□□ -0.44
VPS37A-202ENST00000425020 AACSQ86V21 672 aa12.31□□□□□ -0.44
VPS37A-202ENST00000425020 OTUD7AQ8TE49 926 aaPredicted RBP12.31□□□□□ -0.44
VPS37A-202ENST00000425020 CHMP4CQ96CF2 233 aa12.31□□□□□ -0.44
VPS37A-202ENST00000425020 RNF20Q5VTR2 975 aa12.31□□□□□ -0.44
VPS37A-202ENST00000425020 RASSF8Q8NHQ8 419 aa12.31□□□□□ -0.44
VPS37A-202ENST00000425020 POLKQ9UBT6 870 aa12.31□□□□□ -0.44
VPS37A-202ENST00000425020 FANCAO15360 1455 aa12.31□□□□□ -0.44
VPS37A-202ENST00000425020 A2MP01023 1474 aa12.31□□□□□ -0.44
VPS37A-202ENST00000425020 WASLO00401 505 aaPredicted RBP12.31□□□□□ -0.44
VPS37A-202ENST00000425020 DDX11Q96FC9 970 aa12.31□□□□□ -0.44
VPS37A-202ENST00000425020 MX1P20591 662 aa12.3□□□□□ -0.44
VPS37A-202ENST00000425020 TCEANC2Q96MN5 208 aa12.3□□□□□ -0.44
VPS37A-202ENST00000425020 KDM2BQ8NHM5 1336 aa12.3□□□□□ -0.44
VPS37A-202ENST00000425020 CAMK4Q16566 473 aa12.3□□□□□ -0.44
VPS37A-202ENST00000425020 ALDH1L2Q3SY69 923 aa12.3□□□□□ -0.44
VPS37A-202ENST00000425020 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.3□□□□□ -0.44
VPS37A-202ENST00000425020 CCDC83Q8IWF9 413 aa12.3□□□□□ -0.44
VPS37A-202ENST00000425020 TRIM5Q9C035 493 aa12.3□□□□□ -0.44
VPS37A-202ENST00000425020 TSPY26PQ9H489 355 aa12.3□□□□□ -0.44
VPS37A-202ENST00000425020 CCDC8Q9H0W5 538 aaPredicted RBP12.29□□□□□ -0.44
VPS37A-202ENST00000425020 ASXL1Q8IXJ9 1541 aa12.29□□□□□ -0.44
VPS37A-202ENST00000425020 DISP1Q96F81 1524 aa12.29□□□□□ -0.44
VPS37A-202ENST00000425020 CTTNBP2Q8WZ74 1663 aa12.29□□□□□ -0.44
VPS37A-202ENST00000425020 SDSP20132 328 aa12.29□□□□□ -0.44
VPS37A-202ENST00000425020 NUCB1Q02818 461 aa12.29□□□□□ -0.44
VPS37A-202ENST00000425020 HSP90AB4PQ58FF6 505 aa12.29□□□□□ -0.44
VPS37A-202ENST00000425020 SASS6Q6UVJ0 657 aa12.29□□□□□ -0.44
VPS37A-202ENST00000425020 SDF4Q9BRK5 362 aa12.29□□□□□ -0.44
VPS37A-202ENST00000425020 BOLA2Q9H3K6 86 aa12.29□□□□□ -0.44
VPS37A-202ENST00000425020 CFAP65Q6ZU64 1925 aaKnown RBP12.29□□□□□ -0.44
VPS37A-202ENST00000425020 CASTP20810 708 aaKnown RBP12.29□□□□□ -0.44
VPS37A-202ENST00000425020 BMP2KLQ5H9B9 411 aa12.29□□□□□ -0.44
VPS37A-202ENST00000425020 MTMR7Q9Y216 660 aa12.28□□□□□ -0.44
VPS37A-202ENST00000425020 BAG4O95429 457 aaKnown RBP12.28□□□□□ -0.44
VPS37A-202ENST00000425020 MBD3O95983 291 aa12.28□□□□□ -0.44
VPS37A-202ENST00000425020 LARP1BQ659C4 914 aaKnown RBP12.28□□□□□ -0.44
VPS37A-202ENST00000425020 PRPF40BQ6NWY9 871 aaKnown RBP12.28□□□□□ -0.44
VPS37A-202ENST00000425020 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.28□□□□□ -0.44
VPS37A-202ENST00000425020 BTBD11A6QL63 1104 aa12.28□□□□□ -0.44
VPS37A-202ENST00000425020 CCDC173Q0VFZ6 552 aa12.28□□□□□ -0.44
VPS37A-202ENST00000425020 FLIIQ13045 1269 aa12.27□□□□□ -0.44
VPS37A-202ENST00000425020 ZGPATQ8N5A5 531 aaKnown RBP12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms