RNA–Protein interactions for RNA: ENST00000424932.2

CKS1BP6-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 6, humanhuman

BASIC

Gene CKS1BP6, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP6-201ENST00000424932 PRKAR2BP31323 418 aa6.19□□□□□ -1.42
CKS1BP6-201ENST00000424932 RIPK4P57078 832 aa6.19□□□□□ -1.42
CKS1BP6-201ENST00000424932 LMOD3Q0VAK6 560 aa6.19□□□□□ -1.42
CKS1BP6-201ENST00000424932 HDAC1Q13547 482 aaPredicted RBP6.19□□□□□ -1.42
CKS1BP6-201ENST00000424932 MLECQ14165 292 aa6.19□□□□□ -1.42
CKS1BP6-201ENST00000424932 ATF7IPQ6VMQ6 1270 aa6.19□□□□□ -1.42
CKS1BP6-201ENST00000424932 SKAP1Q86WV1 359 aa6.19□□□□□ -1.42
CKS1BP6-201ENST00000424932 SSH1Q8WYL5 1049 aa6.19□□□□□ -1.42
CKS1BP6-201ENST00000424932 FRAT1Q92837 279 aaPredicted RBP6.19□□□□□ -1.42
CKS1BP6-201ENST00000424932 TSR2Q969E8 191 aaKnown RBP6.19□□□□□ -1.42
CKS1BP6-201ENST00000424932 COG3Q96JB2 828 aa6.19□□□□□ -1.42
CKS1BP6-201ENST00000424932 SMC4Q9NTJ3 1288 aa6.19□□□□□ -1.42
CKS1BP6-201ENST00000424932 IFT57Q9NWB7 429 aa6.19□□□□□ -1.42
CKS1BP6-201ENST00000424932 PCDHB15Q9Y5E8 787 aa6.19□□□□□ -1.42
CKS1BP6-201ENST00000424932 ADAMTSL3P82987 1691 aa6.19□□□□□ -1.42
CKS1BP6-201ENST00000424932 TTC21AQ8NDW8 1320 aa6.19□□□□□ -1.42
CKS1BP6-201ENST00000424932 KIF24Q5T7B8 1368 aa6.18□□□□□ -1.42
CKS1BP6-201ENST00000424932 PPM1GO15355 546 aaPredicted RBP6.18□□□□□ -1.42
CKS1BP6-201ENST00000424932 IPO8O15397 1037 aaKnown RBP6.18□□□□□ -1.42
CKS1BP6-201ENST00000424932 GNAI1P63096 354 aa6.18□□□□□ -1.42
CKS1BP6-201ENST00000424932 TXNDC2Q86VQ3 553 aa6.18□□□□□ -1.42
CKS1BP6-201ENST00000424932 NME9Q86XW9 330 aa6.18□□□□□ -1.42
CKS1BP6-201ENST00000424932 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.18□□□□□ -1.42
CKS1BP6-201ENST00000424932 SMC5Q8IY18 1101 aa6.18□□□□□ -1.42
CKS1BP6-201ENST00000424932 FTSJ3Q8IY81 847 aaKnown RBP6.18□□□□□ -1.42
CKS1BP6-201ENST00000424932 ARHGAP45Q92619 1136 aa6.18□□□□□ -1.42
CKS1BP6-201ENST00000424932 RWDD1Q9H446 243 aaPredicted RBP6.18□□□□□ -1.42
CKS1BP6-201ENST00000424932 TTC21BQ7Z4L5 1316 aa6.18□□□□□ -1.42
CKS1BP6-201ENST00000424932 TUBGCP6Q96RT7 1819 aa6.18□□□□□ -1.42
CKS1BP6-201ENST00000424932 ARHGEF10O15013 1369 aa6.18□□□□□ -1.42
CKS1BP6-201ENST00000424932 KDRP35968 1356 aa6.18□□□□□ -1.42
CKS1BP6-201ENST00000424932 RGS3P49796 1198 aa6.17□□□□□ -1.42
CKS1BP6-201ENST00000424932 NPM2Q86SE8 214 aaKnown RBP6.17□□□□□ -1.42
CKS1BP6-201ENST00000424932 BCL2L13Q9BXK5 485 aa6.17□□□□□ -1.42
CKS1BP6-201ENST00000424932 CHMP4BQ9H444 224 aaKnown RBP6.17□□□□□ -1.42
CKS1BP6-201ENST00000424932 TNNQ9UQP3 1299 aa6.17□□□□□ -1.42
CKS1BP6-201ENST00000424932 TBX22Q9Y458 520 aa6.17□□□□□ -1.42
CKS1BP6-201ENST00000424932 EMILIN1Q9Y6C2 1016 aa6.17□□□□□ -1.42
CKS1BP6-201ENST00000424932 NWD1Q149M9 1564 aa6.17□□□□□ -1.42
CKS1BP6-201ENST00000424932 USP19O94966 1318 aa6.17□□□□□ -1.42
CKS1BP6-201ENST00000424932 KIAA0232Q92628 1395 aa6.17□□□□□ -1.42
CKS1BP6-201ENST00000424932 CAMTA1Q9Y6Y1 1673 aa6.17□□□□□ -1.42
CKS1BP6-201ENST00000424932 SETD1BQ9UPS6 1966 aaKnown RBP6.17□□□□□ -1.42
CKS1BP6-201ENST00000424932 LTKP29376 864 aa6.16□□□□□ -1.42
CKS1BP6-201ENST00000424932 PHACTR3Q96KR7 559 aa6.16□□□□□ -1.42
CKS1BP6-201ENST00000424932 CFAP44Q96MT7 982 aa6.16□□□□□ -1.42
CKS1BP6-201ENST00000424932 ZBTB40Q9NUA8 1239 aa6.16□□□□□ -1.42
CKS1BP6-201ENST00000424932 PDZRN3Q9UPQ7 1066 aa6.16□□□□□ -1.42
CKS1BP6-201ENST00000424932 EID1Q9Y6B2 187 aa6.16□□□□□ -1.42
CKS1BP6-201ENST00000424932 ABCC4O15439 1325 aa6.16□□□□□ -1.42
CKS1BP6-201ENST00000424932 ACEP12821 1306 aa6.16□□□□□ -1.42
CKS1BP6-201ENST00000424932 LMO7Q8WWI1 1683 aa6.16□□□□□ -1.42
CKS1BP6-201ENST00000424932 SBNO1A3KN83 1393 aa6.16□□□□□ -1.42
CKS1BP6-201ENST00000424932 KDM3BQ7LBC6 1761 aa6.16□□□□□ -1.42
CKS1BP6-201ENST00000424932 MED1Q15648 1581 aaPredicted RBP6.15□□□□□ -1.42
CKS1BP6-201ENST00000424932 KIF1AQ12756 1690 aa6.15□□□□□ -1.42
CKS1BP6-201ENST00000424932 HAP1P54257 671 aaPredicted RBP6.15□□□□□ -1.42
CKS1BP6-201ENST00000424932 RTL5Q5HYW3 569 aaPredicted RBP6.15□□□□□ -1.42
CKS1BP6-201ENST00000424932 SENP3Q9H4L4 574 aaPredicted RBP6.15□□□□□ -1.42
CKS1BP6-201ENST00000424932 NOB1Q9ULX3 412 aaKnown RBP6.15□□□□□ -1.42
CKS1BP6-201ENST00000424932 FLT4P35916 1363 aa6.15□□□□□ -1.43
CKS1BP6-201ENST00000424932 RGS12O14924 1447 aa6.15□□□□□ -1.43
CKS1BP6-201ENST00000424932 NFAT5O94916 1531 aa6.15□□□□□ -1.43
CKS1BP6-201ENST00000424932 TRPM3Q9HCF6 1732 aaPredicted RBP6.14□□□□□ -1.43
CKS1BP6-201ENST00000424932 VAMP4O75379 141 aa6.14□□□□□ -1.43
CKS1BP6-201ENST00000424932 EIF4A2Q14240 407 aaKnown RBP6.14□□□□□ -1.43
CKS1BP6-201ENST00000424932 ITPRIPQ8IWB1 547 aa6.14□□□□□ -1.43
CKS1BP6-201ENST00000424932 THEMISQ8N1K5 641 aaPredicted RBP6.14□□□□□ -1.43
CKS1BP6-201ENST00000424932 TMEM57Q8N5G2 664 aa6.14□□□□□ -1.43
CKS1BP6-201ENST00000424932 MRPL50Q8N5N7 158 aaKnown RBP6.14□□□□□ -1.43
CKS1BP6-201ENST00000424932 MBIPQ9NS73 344 aa6.14□□□□□ -1.43
CKS1BP6-201ENST00000424932 ZRANB1Q9UGI0 708 aa6.14□□□□□ -1.43
CKS1BP6-201ENST00000424932 RTL1A6NKG5 1358 aa6.14□□□□□ -1.43
CKS1BP6-201ENST00000424932 CRB1P82279 1406 aa6.14□□□□□ -1.43
CKS1BP6-201ENST00000424932 LMTK3Q96Q04 1460 aa6.14□□□□□ -1.43
CKS1BP6-201ENST00000424932 ADAMTS7Q9UKP4 1686 aa6.14□□□□□ -1.43
CKS1BP6-201ENST00000424932 HMOX1P09601 288 aa6.13□□□□□ -1.43
CKS1BP6-201ENST00000424932 TBC1D32Q96NH3 1257 aa6.13□□□□□ -1.43
CKS1BP6-201ENST00000424932 UPF2Q9HAU5 1272 aaKnown RBP6.13□□□□□ -1.43
CKS1BP6-201ENST00000424932 IGSF1Q8N6C5 1336 aa6.13□□□□□ -1.43
CKS1BP6-201ENST00000424932 NCKAP5LQ9HCH0 1330 aa6.13□□□□□ -1.43
CKS1BP6-201ENST00000424932 SIPA1L3O60292 1781 aaPredicted RBP6.13□□□□□ -1.43
CKS1BP6-201ENST00000424932 RGPD2P0DJD1 1756 aa6.13□□□□□ -1.43
CKS1BP6-201ENST00000424932 PXDNLA1KZ92 1463 aa6.12□□□□□ -1.43
CKS1BP6-201ENST00000424932 SLIT3O75094 1523 aa6.12□□□□□ -1.43
CKS1BP6-201ENST00000424932 FBLN1P23142 703 aa6.12□□□□□ -1.43
CKS1BP6-201ENST00000424932 DEKP35659 375 aaKnown RBP6.12□□□□□ -1.43
CKS1BP6-201ENST00000424932 NUCB1Q02818 461 aa6.12□□□□□ -1.43
CKS1BP6-201ENST00000424932 NBR1Q14596 966 aa6.12□□□□□ -1.43
CKS1BP6-201ENST00000424932 RRS1Q15050 365 aaKnown RBP6.12□□□□□ -1.43
CKS1BP6-201ENST00000424932 TWISTNBQ3B726 338 aaPredicted RBP6.12□□□□□ -1.43
CKS1BP6-201ENST00000424932 GCC1Q96CN9 775 aa6.12□□□□□ -1.43
CKS1BP6-201ENST00000424932 API5Q9BZZ5 524 aaKnown RBP6.12□□□□□ -1.43
CKS1BP6-201ENST00000424932 ADGRL3Q9HAR2 1447 aa6.12□□□□□ -1.43
CKS1BP6-201ENST00000424932 ATP10DQ9P241 1426 aa6.12□□□□□ -1.43
CKS1BP6-201ENST00000424932 DAXXQ9UER7 740 aaPredicted RBP6.12□□□□□ -1.43
CKS1BP6-201ENST00000424932 AMOTL2Q9Y2J4 779 aa6.12□□□□□ -1.43
CKS1BP6-201ENST00000424932 CRYBG1Q9Y4K1 1723 aa6.12□□□□□ -1.43
CKS1BP6-201ENST00000424932 NCAPD2Q15021 1401 aa6.11□□□□□ -1.43
CKS1BP6-201ENST00000424932 NCOA3Q9Y6Q9 1424 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms