RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 C8orf58Q8NAV2 365 aa17.76■□□□□ 0.43
TPM3P9-201ENST00000424846 SNX21Q969T3 373 aa17.76■□□□□ 0.43
TPM3P9-201ENST00000424846 CLTCQ00610 1675 aaKnown RBP17.76■□□□□ 0.43
TPM3P9-201ENST00000424846 ARHGAP31Q2M1Z3 1444 aa17.76■□□□□ 0.43
TPM3P9-201ENST00000424846 NCKAP5LQ9HCH0 1330 aa17.76■□□□□ 0.43
TPM3P9-201ENST00000424846 KIF20BQ96Q89 1820 aa17.75■□□□□ 0.43
TPM3P9-201ENST00000424846 NME9Q86XW9 330 aa17.75■□□□□ 0.43
TPM3P9-201ENST00000424846 MAP2P11137 1827 aaKnown RBP17.75■□□□□ 0.43
TPM3P9-201ENST00000424846 ALKQ9UM73 1620 aa17.74■□□□□ 0.43
TPM3P9-201ENST00000424846 GRPEL1Q9HAV7 217 aa17.73■□□□□ 0.43
TPM3P9-201ENST00000424846 PREX1Q8TCU6 1659 aa17.73■□□□□ 0.43
TPM3P9-201ENST00000424846 GSPT1P15170 499 aaKnown RBP17.73■□□□□ 0.43
TPM3P9-201ENST00000424846 BRPF1P55201 1214 aaPredicted RBP17.73■□□□□ 0.43
TPM3P9-201ENST00000424846 GAS2L2Q8NHY3 880 aa17.73■□□□□ 0.43
TPM3P9-201ENST00000424846 CDC42BPGQ6DT37 1551 aa17.72■□□□□ 0.43
TPM3P9-201ENST00000424846 IL13P35225 146 aa17.72■□□□□ 0.43
TPM3P9-201ENST00000424846 RRS1Q15050 365 aaKnown RBP17.72■□□□□ 0.43
TPM3P9-201ENST00000424846 KRT24Q2M2I5 525 aa17.72■□□□□ 0.43
TPM3P9-201ENST00000424846 C16orf71Q8IYS4 520 aaPredicted RBP17.72■□□□□ 0.43
TPM3P9-201ENST00000424846 PTCH1Q13635 1447 aa17.72■□□□□ 0.43
TPM3P9-201ENST00000424846 DDX11L8A8MPP1 907 aa17.72■□□□□ 0.43
TPM3P9-201ENST00000424846 RAB3GAP1Q15042 981 aa17.72■□□□□ 0.43
TPM3P9-201ENST00000424846 TWISTNBQ3B726 338 aaPredicted RBP17.72■□□□□ 0.43
TPM3P9-201ENST00000424846 PNNQ9H307 717 aaKnown RBP17.72■□□□□ 0.43
TPM3P9-201ENST00000424846 ZNF853P0CG23 659 aa17.71■□□□□ 0.43
TPM3P9-201ENST00000424846 ABCC4O15439 1325 aa17.71■□□□□ 0.43
TPM3P9-201ENST00000424846 ERBB4Q15303 1308 aa17.71■□□□□ 0.43
TPM3P9-201ENST00000424846 PIK3R4Q99570 1358 aa17.71■□□□□ 0.43
TPM3P9-201ENST00000424846 SSFA2P28290 1259 aa17.71■□□□□ 0.43
TPM3P9-201ENST00000424846 GCC1Q96CN9 775 aa17.71■□□□□ 0.43
TPM3P9-201ENST00000424846 AK9Q5TCS8 1911 aa17.71■□□□□ 0.43
TPM3P9-201ENST00000424846 MRE11P49959 708 aa17.71■□□□□ 0.43
TPM3P9-201ENST00000424846 KNDC1Q76NI1 1749 aa17.7■□□□□ 0.42
TPM3P9-201ENST00000424846 OTUD7AQ8TE49 926 aaPredicted RBP17.7■□□□□ 0.42
TPM3P9-201ENST00000424846 STAG3Q9UJ98 1225 aa17.69■□□□□ 0.42
TPM3P9-201ENST00000424846 HSP90AA1P07900 732 aaKnown RBP17.69■□□□□ 0.42
TPM3P9-201ENST00000424846 IFT57Q9NWB7 429 aa17.69■□□□□ 0.42
TPM3P9-201ENST00000424846 GNAI1P63096 354 aa17.68■□□□□ 0.42
TPM3P9-201ENST00000424846 RICTORQ6R327 1708 aa17.68■□□□□ 0.42
TPM3P9-201ENST00000424846 K7ELQ4 463 aaPredicted RBP17.68■□□□□ 0.42
TPM3P9-201ENST00000424846 ARHGAP45Q92619 1136 aa17.68■□□□□ 0.42
TPM3P9-201ENST00000424846 DLG5Q8TDM6 1919 aa17.68■□□□□ 0.42
TPM3P9-201ENST00000424846 NEO1Q92859 1461 aa17.67■□□□□ 0.42
TPM3P9-201ENST00000424846 PLEKHM2Q8IWE5 1019 aa17.67■□□□□ 0.42
TPM3P9-201ENST00000424846 ZNF428Q96B54 188 aa17.67■□□□□ 0.42
TPM3P9-201ENST00000424846 AEBP1Q8IUX7 1158 aa17.66■□□□□ 0.42
TPM3P9-201ENST00000424846 APBB1O00213 710 aa17.66■□□□□ 0.42
TPM3P9-201ENST00000424846 CLCN1P35523 988 aa17.65■□□□□ 0.42
TPM3P9-201ENST00000424846 CFAP44Q96MT7 982 aa17.65■□□□□ 0.42
TPM3P9-201ENST00000424846 CIZ1Q9ULV3 898 aaPredicted RBP17.65■□□□□ 0.42
TPM3P9-201ENST00000424846 SMARCA5O60264 1052 aaPredicted RBP17.64■□□□□ 0.41
TPM3P9-201ENST00000424846 CPS1P31327 1500 aa17.64■□□□□ 0.41
TPM3P9-201ENST00000424846 CDC45O75419 566 aa17.64■□□□□ 0.41
TPM3P9-201ENST00000424846 PKP1Q13835 747 aa17.64■□□□□ 0.41
TPM3P9-201ENST00000424846 GBP4Q96PP9 640 aa17.64■□□□□ 0.41
TPM3P9-201ENST00000424846 OSCARQ8IYS5 282 aa17.63■□□□□ 0.41
TPM3P9-201ENST00000424846 NAP1L5Q96NT1 182 aaPredicted RBP17.63■□□□□ 0.41
TPM3P9-201ENST00000424846 RIMS2Q9UQ26 1411 aa17.63■□□□□ 0.41
TPM3P9-201ENST00000424846 TXNDC2Q86VQ3 553 aa17.62■□□□□ 0.41
TPM3P9-201ENST00000424846 ATP7BP35670 1465 aa17.62■□□□□ 0.41
TPM3P9-201ENST00000424846 CPSF1Q10570 1443 aaKnown RBP17.61■□□□□ 0.41
TPM3P9-201ENST00000424846 DCTPP1Q9H773 170 aa17.61■□□□□ 0.41
TPM3P9-201ENST00000424846 CALD1Q05682 793 aaKnown RBP17.61■□□□□ 0.41
TPM3P9-201ENST00000424846 CHAMP1Q96JM3 812 aa17.61■□□□□ 0.41
TPM3P9-201ENST00000424846 WASLO00401 505 aaPredicted RBP17.6■□□□□ 0.41
TPM3P9-201ENST00000424846 TTC22Q5TAA0 569 aa17.6■□□□□ 0.41
TPM3P9-201ENST00000424846 MCM10Q7L590 875 aa17.6■□□□□ 0.41
TPM3P9-201ENST00000424846 API5Q9BZZ5 524 aaKnown RBP17.6■□□□□ 0.41
TPM3P9-201ENST00000424846 ESPNB1AK53 854 aa17.6■□□□□ 0.41
TPM3P9-201ENST00000424846 RGS12O14924 1447 aa17.59■□□□□ 0.41
TPM3P9-201ENST00000424846 ATP10DQ9P241 1426 aa17.59■□□□□ 0.41
TPM3P9-201ENST00000424846 BAG4O95429 457 aaKnown RBP17.59■□□□□ 0.41
TPM3P9-201ENST00000424846 METP08581 1390 aa17.59■□□□□ 0.41
TPM3P9-201ENST00000424846 CDK12Q9NYV4 1490 aaPredicted RBP17.59■□□□□ 0.41
TPM3P9-201ENST00000424846 NUDT16Q96DE0 195 aaKnown RBP17.59■□□□□ 0.41
TPM3P9-201ENST00000424846 EDC4Q6P2E9 1401 aaKnown RBP17.59■□□□□ 0.41
TPM3P9-201ENST00000424846 RIMBP3CA6NJZ7 1639 aa17.58■□□□□ 0.41
TPM3P9-201ENST00000424846 RIMBP3BA6NNM3 1639 aa17.58■□□□□ 0.41
TPM3P9-201ENST00000424846 RIMBP3Q9UFD9 1639 aa17.58■□□□□ 0.41
TPM3P9-201ENST00000424846 MLECQ14165 292 aa17.58■□□□□ 0.4
TPM3P9-201ENST00000424846 MEIS3Q99687 375 aa17.58■□□□□ 0.4
TPM3P9-201ENST00000424846 USP26Q9BXU7 913 aa17.58■□□□□ 0.4
TPM3P9-201ENST00000424846 COG3Q96JB2 828 aa17.58■□□□□ 0.4
TPM3P9-201ENST00000424846 MIS18AQ9NYP9 233 aa17.58■□□□□ 0.4
TPM3P9-201ENST00000424846 A2ML1A8K2U0 1454 aa17.57■□□□□ 0.4
TPM3P9-201ENST00000424846 SDSP20132 328 aa17.57■□□□□ 0.4
TPM3P9-201ENST00000424846 SULT6B1Q6IMI4 303 aa17.57■□□□□ 0.4
TPM3P9-201ENST00000424846 CHMP4BQ9H444 224 aaKnown RBP17.57■□□□□ 0.4
TPM3P9-201ENST00000424846 CEP85Q6P2H3 762 aa17.57■□□□□ 0.4
TPM3P9-201ENST00000424846 MSH6P52701 1360 aa17.57■□□□□ 0.4
TPM3P9-201ENST00000424846 SETD1AO15047 1707 aaKnown RBP17.57■□□□□ 0.4
TPM3P9-201ENST00000424846 INTS3Q68E01 1043 aaKnown RBP17.56■□□□□ 0.4
TPM3P9-201ENST00000424846 ZGPATQ8N5A5 531 aaKnown RBP17.56■□□□□ 0.4
TPM3P9-201ENST00000424846 ANKRD44Q8N8A2 993 aa17.56■□□□□ 0.4
TPM3P9-201ENST00000424846 NUTM2FA1L443 756 aa17.56■□□□□ 0.4
TPM3P9-201ENST00000424846 DDX49Q9Y6V7 483 aaKnown RBP17.56■□□□□ 0.4
TPM3P9-201ENST00000424846 EIF4A2Q14240 407 aaKnown RBP17.55■□□□□ 0.4
TPM3P9-201ENST00000424846 MCTP1Q6DN14 999 aa17.55■□□□□ 0.4
TPM3P9-201ENST00000424846 PRR36Q9H6K5 1346 aa17.55■□□□□ 0.4
TPM3P9-201ENST00000424846 UBE2Q2Q8WVN8 375 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms