RNA–Protein interactions for RNA: ENST00000424751.2

LINC00839-201, long intergenic non-protein coding RNA 839, humanhuman

TSL 2

Gene LINC00839, Length 2,252 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-201ENST00000424751 RSPH6AQ9H0K4 717 aa18.66■□□□□ 0.58
LINC00839-201ENST00000424751 TRPM3Q9HCF6 1732 aaPredicted RBP18.66■□□□□ 0.58
LINC00839-201ENST00000424751 PRKAR2BP31323 418 aa18.66■□□□□ 0.58
LINC00839-201ENST00000424751 RTL5Q5HYW3 569 aaPredicted RBP18.66■□□□□ 0.58
LINC00839-201ENST00000424751 DUSP27Q5VZP5 1158 aa18.65■□□□□ 0.58
LINC00839-201ENST00000424751 KRT28Q7Z3Y7 464 aa18.65■□□□□ 0.58
LINC00839-201ENST00000424751 LTN1O94822 1766 aa18.63■□□□□ 0.57
LINC00839-201ENST00000424751 LTV1Q96GA3 475 aaPredicted RBP18.63■□□□□ 0.57
LINC00839-201ENST00000424751 CABLES1Q8TDN4 633 aa18.63■□□□□ 0.57
LINC00839-201ENST00000424751 THUMPD2Q9BTF0 503 aaKnown RBP18.62■□□□□ 0.57
LINC00839-201ENST00000424751 PLIN1O60240 522 aa18.62■□□□□ 0.57
LINC00839-201ENST00000424751 SLFN5Q08AF3 891 aa18.62■□□□□ 0.57
LINC00839-201ENST00000424751 TRIM35Q9UPQ4 493 aa18.62■□□□□ 0.57
LINC00839-201ENST00000424751 TMPOP42166 694 aaKnown RBP18.61■□□□□ 0.57
LINC00839-201ENST00000424751 GOLGA2Q08379 1002 aa18.61■□□□□ 0.57
LINC00839-201ENST00000424751 MSH6P52701 1360 aa18.61■□□□□ 0.57
LINC00839-201ENST00000424751 RGPD2P0DJD1 1756 aa18.6■□□□□ 0.57
LINC00839-201ENST00000424751 NFAT5O94916 1531 aa18.6■□□□□ 0.57
LINC00839-201ENST00000424751 SULT6B1Q6IMI4 303 aa18.6■□□□□ 0.57
LINC00839-201ENST00000424751 BRINP3Q76B58 766 aa18.6■□□□□ 0.57
LINC00839-201ENST00000424751 USHBP1Q8N6Y0 703 aa18.6■□□□□ 0.57
LINC00839-201ENST00000424751 PHF23Q9BUL5 403 aaPredicted RBP18.6■□□□□ 0.57
LINC00839-201ENST00000424751 DLG5Q8TDM6 1919 aa18.59■□□□□ 0.57
LINC00839-201ENST00000424751 USP54Q70EL1 1684 aa18.59■□□□□ 0.57
LINC00839-201ENST00000424751 AMPHP49418 695 aa18.59■□□□□ 0.57
LINC00839-201ENST00000424751 HOXC9P31274 260 aa18.58■□□□□ 0.57
LINC00839-201ENST00000424751 RGPD1P0DJD0 1748 aa18.58■□□□□ 0.57
LINC00839-201ENST00000424751 RCAN3Q9UKA8 241 aa18.58■□□□□ 0.56
LINC00839-201ENST00000424751 FAM83GA6ND36 823 aa18.57■□□□□ 0.56
LINC00839-201ENST00000424751 PDE3BQ13370 1112 aa18.57■□□□□ 0.56
LINC00839-201ENST00000424751 CADPS2Q86UW7 1296 aa18.57■□□□□ 0.56
LINC00839-201ENST00000424751 TRMT2AQ8IZ69 625 aaKnown RBP18.57■□□□□ 0.56
LINC00839-201ENST00000424751 ALS2Q96Q42 1657 aa18.57■□□□□ 0.56
LINC00839-201ENST00000424751 MED1Q15648 1581 aaPredicted RBP18.57■□□□□ 0.56
LINC00839-201ENST00000424751 RIPK4P57078 832 aa18.57■□□□□ 0.56
LINC00839-201ENST00000424751 DCTN1Q14203 1278 aa18.57■□□□□ 0.56
LINC00839-201ENST00000424751 TSR2Q969E8 191 aaKnown RBP18.57■□□□□ 0.56
LINC00839-201ENST00000424751 RGPD5Q99666 1765 aa18.57■□□□□ 0.56
LINC00839-201ENST00000424751 EYA1Q99502 592 aa18.56■□□□□ 0.56
LINC00839-201ENST00000424751 KIF1AQ12756 1690 aa18.56■□□□□ 0.56
LINC00839-201ENST00000424751 SBNO1A3KN83 1393 aa18.56■□□□□ 0.56
LINC00839-201ENST00000424751 AEBP2Q6ZN18 517 aaPredicted RBP18.56■□□□□ 0.56
LINC00839-201ENST00000424751 MAPK8IP3Q9UPT6 1336 aa18.55■□□□□ 0.56
LINC00839-201ENST00000424751 TCERG1O14776 1098 aaKnown RBP18.55■□□□□ 0.56
LINC00839-201ENST00000424751 FCHSD2O94868 740 aa18.55■□□□□ 0.56
LINC00839-201ENST00000424751 ZC3H6P61129 1189 aaKnown RBP18.55■□□□□ 0.56
LINC00839-201ENST00000424751 SLAIN2Q9P270 581 aa18.55■□□□□ 0.56
LINC00839-201ENST00000424751 DCCP43146 1447 aa18.55■□□□□ 0.56
LINC00839-201ENST00000424751 FLT4P35916 1363 aa18.55■□□□□ 0.56
LINC00839-201ENST00000424751 GCP02774 474 aa18.54■□□□□ 0.56
LINC00839-201ENST00000424751 AXIN2Q9Y2T1 843 aa18.54■□□□□ 0.56
LINC00839-201ENST00000424751 LRRC59Q96AG4 307 aaKnown RBP18.54■□□□□ 0.56
LINC00839-201ENST00000424751 PXDNQ92626 1479 aa18.54■□□□□ 0.56
LINC00839-201ENST00000424751 C20orf194Q5TEA3 1177 aa18.53■□□□□ 0.56
LINC00839-201ENST00000424751 NCOA3Q9Y6Q9 1424 aa18.52■□□□□ 0.56
LINC00839-201ENST00000424751 RRP1P56182 461 aaKnown RBP18.52■□□□□ 0.56
LINC00839-201ENST00000424751 BCAR3O75815 825 aa18.51■□□□□ 0.55
LINC00839-201ENST00000424751 SLIT3O75094 1523 aa18.5■□□□□ 0.55
LINC00839-201ENST00000424751 CHRNA2Q15822 529 aa18.49■□□□□ 0.55
LINC00839-201ENST00000424751 USP19O94966 1318 aa18.49■□□□□ 0.55
LINC00839-201ENST00000424751 NFE2L2Q16236 605 aa18.49■□□□□ 0.55
LINC00839-201ENST00000424751 NBPF6Q5VWK0 638 aa18.49■□□□□ 0.55
LINC00839-201ENST00000424751 NBPF4Q96M43 638 aa18.49■□□□□ 0.55
LINC00839-201ENST00000424751 USP35Q9P2H5 1018 aa18.49■□□□□ 0.55
LINC00839-201ENST00000424751 E9PSI1 815 aa18.48■□□□□ 0.55
LINC00839-201ENST00000424751 MS4A1P11836 297 aa18.48■□□□□ 0.55
LINC00839-201ENST00000424751 ARHGEF25Q86VW2 580 aa18.48■□□□□ 0.55
LINC00839-201ENST00000424751 BCL2L13Q9BXK5 485 aa18.48■□□□□ 0.55
LINC00839-201ENST00000424751 LAS1LQ9Y4W2 734 aaKnown RBP18.48■□□□□ 0.55
LINC00839-201ENST00000424751 CCDC27Q2M243 656 aa18.47■□□□□ 0.55
LINC00839-201ENST00000424751 IP6K1Q92551 441 aa18.47■□□□□ 0.55
LINC00839-201ENST00000424751 TNNQ9UQP3 1299 aa18.47■□□□□ 0.55
LINC00839-201ENST00000424751 LTBP4Q8N2S1 1624 aa18.47■□□□□ 0.55
LINC00839-201ENST00000424751 NPHP3Q7Z494 1330 aa18.47■□□□□ 0.55
LINC00839-201ENST00000424751 IGSF1Q8N6C5 1336 aa18.47■□□□□ 0.55
LINC00839-201ENST00000424751 PHRF1Q9P1Y6 1649 aaKnown RBP18.46■□□□□ 0.55
LINC00839-201ENST00000424751 MTHFSDQ2M296 383 aaKnown RBP18.46■□□□□ 0.55
LINC00839-201ENST00000424751 MCM10Q7L590 875 aa18.46■□□□□ 0.55
LINC00839-201ENST00000424751 SPATA31A3Q5VYP0 1347 aa18.46■□□□□ 0.55
LINC00839-201ENST00000424751 CRYBG1Q9Y4K1 1723 aa18.46■□□□□ 0.55
LINC00839-201ENST00000424751 TNS3Q68CZ2 1445 aa18.45■□□□□ 0.54
LINC00839-201ENST00000424751 WDR63Q8IWG1 891 aa18.45■□□□□ 0.54
LINC00839-201ENST00000424751 EXOC6Q8TAG9 804 aa18.45■□□□□ 0.54
LINC00839-201ENST00000424751 PDE4AP27815 886 aa18.44■□□□□ 0.54
LINC00839-201ENST00000424751 ARHGEF10O15013 1369 aa18.43■□□□□ 0.54
LINC00839-201ENST00000424751 EXOSC9Q06265 439 aaKnown RBP18.43■□□□□ 0.54
LINC00839-201ENST00000424751 NPM2Q86SE8 214 aaKnown RBP18.42■□□□□ 0.54
LINC00839-201ENST00000424751 KCNH5Q8NCM2 988 aa18.42■□□□□ 0.54
LINC00839-201ENST00000424751 BACH2Q9BYV9 841 aa18.42■□□□□ 0.54
LINC00839-201ENST00000424751 MIS18AQ9NYP9 233 aa18.42■□□□□ 0.54
LINC00839-201ENST00000424751 KDRP35968 1356 aa18.42■□□□□ 0.54
LINC00839-201ENST00000424751 SOS2Q07890 1332 aaPredicted RBP18.41■□□□□ 0.54
LINC00839-201ENST00000424751 KRT24Q2M2I5 525 aa18.41■□□□□ 0.54
LINC00839-201ENST00000424751 ANKRD24Q8TF21 1146 aa18.41■□□□□ 0.54
LINC00839-201ENST00000424751 COL18A1P39060 1754 aa18.41■□□□□ 0.54
LINC00839-201ENST00000424751 KIAA0232Q92628 1395 aa18.4■□□□□ 0.54
LINC00839-201ENST00000424751 ELL2O00472 640 aaPredicted RBP18.39■□□□□ 0.54
LINC00839-201ENST00000424751 TSPYL6Q8N831 410 aa18.39■□□□□ 0.54
LINC00839-201ENST00000424751 CRBNQ96SW2 442 aa18.39■□□□□ 0.54
LINC00839-201ENST00000424751 ROBO1Q9Y6N7 1651 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms