RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 NOL7Q9UMY1 257 aaKnown RBP20.6■□□□□ 0.89
NPC1L1-203ENST00000423141 ARHGAP31Q2M1Z3 1444 aa20.6■□□□□ 0.89
NPC1L1-203ENST00000423141 FYB1O15117 783 aa20.59■□□□□ 0.89
NPC1L1-203ENST00000423141 DIAPH1O60610 1272 aaKnown RBP20.59■□□□□ 0.89
NPC1L1-203ENST00000423141 GLI2P10070 1586 aa20.59■□□□□ 0.89
NPC1L1-203ENST00000423141 PDLIM2Q96JY6 352 aa20.59■□□□□ 0.89
NPC1L1-203ENST00000423141 ATAD2Q6PL18 1390 aa20.59■□□□□ 0.89
NPC1L1-203ENST00000423141 VAMP4O75379 141 aa20.58■□□□□ 0.89
NPC1L1-203ENST00000423141 RABEP1Q15276 862 aa20.58■□□□□ 0.89
NPC1L1-203ENST00000423141 ZGPATQ8N5A5 531 aaKnown RBP20.58■□□□□ 0.89
NPC1L1-203ENST00000423141 GPT2Q8TD30 523 aa20.58■□□□□ 0.89
NPC1L1-203ENST00000423141 PRPF40AO75400 957 aaKnown RBP20.58■□□□□ 0.88
NPC1L1-203ENST00000423141 SRPK2P78362 688 aaKnown RBP20.58■□□□□ 0.88
NPC1L1-203ENST00000423141 PLEKHM2Q8IWE5 1019 aa20.58■□□□□ 0.88
NPC1L1-203ENST00000423141 FBLN1P23142 703 aa20.57■□□□□ 0.88
NPC1L1-203ENST00000423141 NUCB2P80303 420 aa20.57■□□□□ 0.88
NPC1L1-203ENST00000423141 C16orf71Q8IYS4 520 aaPredicted RBP20.57■□□□□ 0.88
NPC1L1-203ENST00000423141 ARAP3Q8WWN8 1544 aa20.57■□□□□ 0.88
NPC1L1-203ENST00000423141 PRKAR2BP31323 418 aa20.56■□□□□ 0.88
NPC1L1-203ENST00000423141 BRPF1P55201 1214 aaPredicted RBP20.56■□□□□ 0.88
NPC1L1-203ENST00000423141 PUS7Q96PZ0 661 aaKnown RBP20.56■□□□□ 0.88
NPC1L1-203ENST00000423141 NPATQ14207 1427 aa20.56■□□□□ 0.88
NPC1L1-203ENST00000423141 ARHGEF28Q8N1W1 1705 aaKnown RBP20.56■□□□□ 0.88
NPC1L1-203ENST00000423141 ZNF500O60304 480 aaPredicted RBP20.56■□□□□ 0.88
NPC1L1-203ENST00000423141 TERF1P54274 439 aa20.56■□□□□ 0.88
NPC1L1-203ENST00000423141 HS1BP3Q53T59 392 aa20.56■□□□□ 0.88
NPC1L1-203ENST00000423141 PIK3R4Q99570 1358 aa20.56■□□□□ 0.88
NPC1L1-203ENST00000423141 USP26Q9BXU7 913 aa20.55■□□□□ 0.88
NPC1L1-203ENST00000423141 PTCH1Q13635 1447 aa20.55■□□□□ 0.88
NPC1L1-203ENST00000423141 UQCRHLA0A096LP55 91 aa20.55■□□□□ 0.88
NPC1L1-203ENST00000423141 UQCRHP07919 91 aa20.55■□□□□ 0.88
NPC1L1-203ENST00000423141 ARID3AQ99856 593 aa20.55■□□□□ 0.88
NPC1L1-203ENST00000423141 STK26Q9P289 416 aa20.55■□□□□ 0.88
NPC1L1-203ENST00000423141 ZDHHC9Q9Y397 364 aa20.55■□□□□ 0.88
NPC1L1-203ENST00000423141 NSFL1CQ9UNZ2 370 aaKnown RBP20.54■□□□□ 0.88
NPC1L1-203ENST00000423141 OTUD7AQ8TE49 926 aaPredicted RBP20.54■□□□□ 0.88
NPC1L1-203ENST00000423141 PHACTR3Q96KR7 559 aa20.54■□□□□ 0.88
NPC1L1-203ENST00000423141 LRRC7Q96NW7 1537 aa20.54■□□□□ 0.88
NPC1L1-203ENST00000423141 ABCC4O15439 1325 aa20.54■□□□□ 0.88
NPC1L1-203ENST00000423141 TMEM63CQ9P1W3 806 aa20.53■□□□□ 0.88
NPC1L1-203ENST00000423141 TTC22Q5TAA0 569 aa20.52■□□□□ 0.88
NPC1L1-203ENST00000423141 ARHGAP45Q92619 1136 aa20.52■□□□□ 0.88
NPC1L1-203ENST00000423141 SYCE3A1L190 88 aa20.52■□□□□ 0.88
NPC1L1-203ENST00000423141 ZKSCAN5Q9Y2L8 839 aa20.52■□□□□ 0.88
NPC1L1-203ENST00000423141 UHRF1BP1LA0JNW5 1464 aa20.51■□□□□ 0.87
NPC1L1-203ENST00000423141 HMOX1P09601 288 aa20.51■□□□□ 0.87
NPC1L1-203ENST00000423141 FOXD4L5Q5VV16 416 aaPredicted RBP20.51■□□□□ 0.87
NPC1L1-203ENST00000423141 GGT6Q6P531 493 aa20.51■□□□□ 0.87
NPC1L1-203ENST00000423141 FOXD4L4Q8WXT5 416 aaPredicted RBP20.51■□□□□ 0.87
NPC1L1-203ENST00000423141 CAMSAP1Q5T5Y3 1602 aa20.51■□□□□ 0.87
NPC1L1-203ENST00000423141 ABCA9Q8IUA7 1624 aa20.51■□□□□ 0.87
NPC1L1-203ENST00000423141 LMTK2Q8IWU2 1503 aa20.51■□□□□ 0.87
NPC1L1-203ENST00000423141 ZNF428Q96B54 188 aa20.51■□□□□ 0.87
NPC1L1-203ENST00000423141 CHMP4BQ9H444 224 aaKnown RBP20.51■□□□□ 0.87
NPC1L1-203ENST00000423141 FCHSD2O94868 740 aa20.5■□□□□ 0.87
NPC1L1-203ENST00000423141 PNPLA6Q8IY17 1366 aa20.5■□□□□ 0.87
NPC1L1-203ENST00000423141 MBIPQ9NS73 344 aa20.49■□□□□ 0.87
NPC1L1-203ENST00000423141 KNDC1Q76NI1 1749 aa20.49■□□□□ 0.87
NPC1L1-203ENST00000423141 RNF214Q8ND24 703 aa20.49■□□□□ 0.87
NPC1L1-203ENST00000423141 PRDM4Q9UKN5 801 aa20.49■□□□□ 0.87
NPC1L1-203ENST00000423141 RPGRIP1LQ68CZ1 1315 aa20.49■□□□□ 0.87
NPC1L1-203ENST00000423141 MINK1Q8N4C8 1332 aaPredicted RBP20.49■□□□□ 0.87
NPC1L1-203ENST00000423141 CD163L1Q9NR16 1453 aa20.48■□□□□ 0.87
NPC1L1-203ENST00000423141 FAM135BQ49AJ0 1406 aa20.48■□□□□ 0.87
NPC1L1-203ENST00000423141 KIDINS220Q9ULH0 1771 aa20.48■□□□□ 0.87
NPC1L1-203ENST00000423141 LRSAM1Q6UWE0 723 aa20.48■□□□□ 0.87
NPC1L1-203ENST00000423141 APBB1O00213 710 aa20.47■□□□□ 0.87
NPC1L1-203ENST00000423141 C8orf58Q8NAV2 365 aa20.47■□□□□ 0.87
NPC1L1-203ENST00000423141 DCTPP1Q9H773 170 aa20.47■□□□□ 0.87
NPC1L1-203ENST00000423141 REREQ9P2R6 1566 aa20.47■□□□□ 0.87
NPC1L1-203ENST00000423141 SDSP20132 328 aa20.47■□□□□ 0.87
NPC1L1-203ENST00000423141 CWC22Q9HCG8 908 aaKnown RBP20.47■□□□□ 0.87
NPC1L1-203ENST00000423141 SMARCA5O60264 1052 aaPredicted RBP20.46■□□□□ 0.87
NPC1L1-203ENST00000423141 TWISTNBQ3B726 338 aaPredicted RBP20.46■□□□□ 0.87
NPC1L1-203ENST00000423141 INTS3Q68E01 1043 aaKnown RBP20.46■□□□□ 0.87
NPC1L1-203ENST00000423141 TERF2IPQ9NYB0 399 aa20.46■□□□□ 0.87
NPC1L1-203ENST00000423141 NFE2L2Q16236 605 aa20.46■□□□□ 0.87
NPC1L1-203ENST00000423141 ZBTB7CA1YPR0 619 aa20.45■□□□□ 0.86
NPC1L1-203ENST00000423141 ST18O60284 1047 aa20.45■□□□□ 0.86
NPC1L1-203ENST00000423141 MAP7D2Q96T17 732 aa20.44■□□□□ 0.86
NPC1L1-203ENST00000423141 VGFO15240 615 aaPredicted RBP20.44■□□□□ 0.86
NPC1L1-203ENST00000423141 ANKRD26Q9UPS8 1709 aa20.44■□□□□ 0.86
NPC1L1-203ENST00000423141 GNAI1P63096 354 aa20.43■□□□□ 0.86
NPC1L1-203ENST00000423141 IFT57Q9NWB7 429 aa20.43■□□□□ 0.86
NPC1L1-203ENST00000423141 POLKQ9UBT6 870 aa20.43■□□□□ 0.86
NPC1L1-203ENST00000423141 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.42■□□□□ 0.86
NPC1L1-203ENST00000423141 CCDC39Q9UFE4 941 aa20.42■□□□□ 0.86
NPC1L1-203ENST00000423141 ZNF853P0CG23 659 aa20.42■□□□□ 0.86
NPC1L1-203ENST00000423141 CSPP1Q1MSJ5 1256 aa20.41■□□□□ 0.86
NPC1L1-203ENST00000423141 PRAM1Q96QH2 718 aa20.41■□□□□ 0.86
NPC1L1-203ENST00000423141 API5Q9BZZ5 524 aaKnown RBP20.41■□□□□ 0.86
NPC1L1-203ENST00000423141 FAM83GA6ND36 823 aa20.41■□□□□ 0.86
NPC1L1-203ENST00000423141 DYNC1I1O14576 645 aa20.41■□□□□ 0.86
NPC1L1-203ENST00000423141 JARID2Q92833 1246 aaPredicted RBP20.41■□□□□ 0.86
NPC1L1-203ENST00000423141 CABP1Q9NZU7 370 aa20.41■□□□□ 0.86
NPC1L1-203ENST00000423141 NEXMIFQ5QGS0 1516 aa20.4■□□□□ 0.86
NPC1L1-203ENST00000423141 MCM5P33992 734 aa20.4■□□□□ 0.86
NPC1L1-203ENST00000423141 SASS6Q6UVJ0 657 aa20.4■□□□□ 0.86
NPC1L1-203ENST00000423141 MPNDQ8N594 471 aa20.4■□□□□ 0.86
NPC1L1-203ENST00000423141 CDC42BPGQ6DT37 1551 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms