RNA–Protein interactions for RNA: ENST00000422748.5

CALD1-205, Transcript of caldesmon 1, humanhuman

TSL 2 BASIC

Gene CALD1, Length 2,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-205ENST00000422748 CHMP4BQ9H444 224 aaKnown RBP16.24■□□□□ 0.19
CALD1-205ENST00000422748 POGZQ7Z3K3 1410 aa16.24■□□□□ 0.19
CALD1-205ENST00000422748 SHPRHQ149N8 1683 aa16.24■□□□□ 0.19
CALD1-205ENST00000422748 GTF2F1P35269 517 aaKnown RBP eCLIP16.24■□□□□ 0.19
CALD1-205ENST00000422748 SPDYE4A6NLX3 237 aa16.23■□□□□ 0.19
CALD1-205ENST00000422748 TBC1D9Q6ZT07 1266 aa16.23■□□□□ 0.19
CALD1-205ENST00000422748 VWDEQ8N2E2 1590 aa16.23■□□□□ 0.19
CALD1-205ENST00000422748 CHD1LQ86WJ1 897 aa16.23■□□□□ 0.19
CALD1-205ENST00000422748 SMC4Q9NTJ3 1288 aa16.23■□□□□ 0.19
CALD1-205ENST00000422748 MAP3K4Q9Y6R4 1608 aa16.23■□□□□ 0.19
CALD1-205ENST00000422748 KANK1Q14678 1352 aa16.22■□□□□ 0.19
CALD1-205ENST00000422748 HMGN5P82970 282 aaKnown RBP16.22■□□□□ 0.19
CALD1-205ENST00000422748 CARD14Q9BXL6 1004 aa16.22■□□□□ 0.19
CALD1-205ENST00000422748 NEO1Q92859 1461 aa16.22■□□□□ 0.19
CALD1-205ENST00000422748 NSFL1CQ9UNZ2 370 aaKnown RBP16.22■□□□□ 0.19
CALD1-205ENST00000422748 GLI2P10070 1586 aa16.22■□□□□ 0.19
CALD1-205ENST00000422748 MROH1Q8NDA8 1641 aa16.22■□□□□ 0.19
CALD1-205ENST00000422748 CEP152O94986 1710 aa16.21■□□□□ 0.18
CALD1-205ENST00000422748 MPNDQ8N594 471 aa16.21■□□□□ 0.18
CALD1-205ENST00000422748 CHAMP1Q96JM3 812 aa16.21■□□□□ 0.18
CALD1-205ENST00000422748 MLH3Q9UHC1 1453 aa16.2■□□□□ 0.18
CALD1-205ENST00000422748 KDM5AP29375 1690 aaKnown RBP16.2■□□□□ 0.18
CALD1-205ENST00000422748 TMEM57Q8N5G2 664 aa16.2■□□□□ 0.18
CALD1-205ENST00000422748 ZBTB40Q9NUA8 1239 aa16.2■□□□□ 0.18
CALD1-205ENST00000422748 KIF3AQ9Y496 699 aa16.2■□□□□ 0.18
CALD1-205ENST00000422748 SCAF11Q99590 1463 aaKnown RBP16.2■□□□□ 0.18
CALD1-205ENST00000422748 BCL2L12Q9HB09 334 aa16.2■□□□□ 0.18
CALD1-205ENST00000422748 ATF7IPQ6VMQ6 1270 aa16.19■□□□□ 0.18
CALD1-205ENST00000422748 PIBF1Q8WXW3 757 aa16.19■□□□□ 0.18
CALD1-205ENST00000422748 TSR2Q969E8 191 aaKnown RBP16.19■□□□□ 0.18
CALD1-205ENST00000422748 ZNF830Q96NB3 372 aaPredicted RBP16.19■□□□□ 0.18
CALD1-205ENST00000422748 MADDQ8WXG6 1647 aa16.19■□□□□ 0.18
CALD1-205ENST00000422748 NOLC1Q14978 699 aaKnown RBP eCLIP16.19■□□□□ 0.18
CALD1-205ENST00000422748 CCDC27Q2M243 656 aa16.19■□□□□ 0.18
CALD1-205ENST00000422748 C17orf53Q8N3J3 647 aaPredicted RBP16.18■□□□□ 0.18
CALD1-205ENST00000422748 PDCL2Q8N4E4 241 aa16.18■□□□□ 0.18
CALD1-205ENST00000422748 SSH1Q8WYL5 1049 aa16.18■□□□□ 0.18
CALD1-205ENST00000422748 VGLL3A8MV65 326 aa16.17■□□□□ 0.18
CALD1-205ENST00000422748 NOB1Q9ULX3 412 aaKnown RBP16.17■□□□□ 0.18
CALD1-205ENST00000422748 ZDHHC9Q9Y397 364 aa16.17■□□□□ 0.18
CALD1-205ENST00000422748 FRMPD1Q5SYB0 1578 aa16.17■□□□□ 0.18
CALD1-205ENST00000422748 TET3O43151 1660 aa16.17■□□□□ 0.18
CALD1-205ENST00000422748 HECW2Q9P2P5 1572 aa16.16■□□□□ 0.18
CALD1-205ENST00000422748 EXOSC9Q06265 439 aaKnown RBP16.16■□□□□ 0.18
CALD1-205ENST00000422748 RABEP1Q15276 862 aa16.16■□□□□ 0.18
CALD1-205ENST00000422748 ANKRD45Q5TZF3 282 aa16.16■□□□□ 0.18
CALD1-205ENST00000422748 ZGPATQ8N5A5 531 aaKnown RBP16.16■□□□□ 0.18
CALD1-205ENST00000422748 IPO4Q8TEX9 1081 aaKnown RBP16.16■□□□□ 0.18
CALD1-205ENST00000422748 CGNQ9P2M7 1197 aaKnown RBP16.16■□□□□ 0.18
CALD1-205ENST00000422748 PTPRTO14522 1441 aa16.16■□□□□ 0.18
CALD1-205ENST00000422748 ZBTB22O15209 634 aa16.16■□□□□ 0.18
CALD1-205ENST00000422748 U2AF2P26368 475 aaKnown RBP eCLIP16.16■□□□□ 0.188e-8■□□□□ 10.4
CALD1-205ENST00000422748 KIF3BO15066 747 aa16.15■□□□□ 0.18
CALD1-205ENST00000422748 TAF3Q5VWG9 929 aa16.15■□□□□ 0.18
CALD1-205ENST00000422748 DIP2BQ9P265 1576 aa16.14■□□□□ 0.17
CALD1-205ENST00000422748 TSPY26PQ9H489 355 aa16.14■□□□□ 0.17
CALD1-205ENST00000422748 CWC22Q9HCG8 908 aaKnown RBP16.14■□□□□ 0.17
CALD1-205ENST00000422748 ABCA6Q8N139 1617 aa16.14■□□□□ 0.17
CALD1-205ENST00000422748 TRPM2O94759 1503 aa16.14■□□□□ 0.17
CALD1-205ENST00000422748 CT47B1P0C2W7 299 aaPredicted RBP16.13■□□□□ 0.17
CALD1-205ENST00000422748 TTC12Q9H892 705 aaPredicted RBP16.13■□□□□ 0.17
CALD1-205ENST00000422748 RICTORQ6R327 1708 aa16.13■□□□□ 0.17
CALD1-205ENST00000422748 FKBP5Q13451 457 aaPredicted RBP16.13■□□□□ 0.17
CALD1-205ENST00000422748 ZNF771Q7L3S4 317 aaPredicted RBP16.13■□□□□ 0.17
CALD1-205ENST00000422748 CDC45O75419 566 aa16.12■□□□□ 0.17
CALD1-205ENST00000422748 MORC1Q86VD1 984 aa16.12■□□□□ 0.17
CALD1-205ENST00000422748 RAPGEF3O95398 923 aa16.12■□□□□ 0.17
CALD1-205ENST00000422748 FOXD4L5Q5VV16 416 aaPredicted RBP16.12■□□□□ 0.17
CALD1-205ENST00000422748 FOXD4L4Q8WXT5 416 aaPredicted RBP16.12■□□□□ 0.17
CALD1-205ENST00000422748 SPHKAPQ2M3C7 1700 aa16.12■□□□□ 0.17
CALD1-205ENST00000422748 MBD3O95983 291 aa16.11■□□□□ 0.17
CALD1-205ENST00000422748 ERVK-7P63135 1459 aa16.11■□□□□ 0.17
CALD1-205ENST00000422748 LMTK2Q8IWU2 1503 aa16.11■□□□□ 0.17
CALD1-205ENST00000422748 ANKRD7Q92527 254 aa16.11■□□□□ 0.17
CALD1-205ENST00000422748 SPTLC3Q9NUV7 552 aa16.11■□□□□ 0.17
CALD1-205ENST00000422748 NOS1P29475 1434 aa16.09■□□□□ 0.17
CALD1-205ENST00000422748 EFCAB6Q5THR3 1501 aa16.09■□□□□ 0.17
CALD1-205ENST00000422748 PPRC1Q5VV67 1664 aaKnown RBP16.09■□□□□ 0.17
CALD1-205ENST00000422748 RIOK3O14730 519 aaKnown RBP16.09■□□□□ 0.17
CALD1-205ENST00000422748 USP25Q9UHP3 1055 aa16.09■□□□□ 0.17
CALD1-205ENST00000422748 PPIP5K1Q6PFW1 1433 aa16.09■□□□□ 0.17
CALD1-205ENST00000422748 CLTCL1P53675 1640 aa16.08■□□□□ 0.17
CALD1-205ENST00000422748 DIP2CQ9Y2E4 1556 aa16.08■□□□□ 0.17
CALD1-205ENST00000422748 GCC1Q96CN9 775 aa16.08■□□□□ 0.16
CALD1-205ENST00000422748 MTHFSP49914 203 aa16.08■□□□□ 0.16
CALD1-205ENST00000422748 FAM69CQ0P6D2 419 aa16.08■□□□□ 0.16
CALD1-205ENST00000422748 GSPT1P15170 499 aaKnown RBP16.07■□□□□ 0.16
CALD1-205ENST00000422748 C1orf115Q9H7X2 142 aa16.07■□□□□ 0.16
CALD1-205ENST00000422748 PLCD3Q8N3E9 789 aa16.07■□□□□ 0.16
CALD1-205ENST00000422748 USP26Q9BXU7 913 aa16.07■□□□□ 0.16
CALD1-205ENST00000422748 CCDC9Q9Y3X0 531 aaKnown RBP16.07■□□□□ 0.16
CALD1-205ENST00000422748 NSD3Q9BZ95 1437 aa16.06■□□□□ 0.16
CALD1-205ENST00000422748 ADCY5O95622 1261 aa16.06■□□□□ 0.16
CALD1-205ENST00000422748 U2AF1L5P0DN76 240 aaPredicted RBP16.06■□□□□ 0.16
CALD1-205ENST00000422748 U2AF1Q01081 240 aaKnown RBP eCLIP16.06■□□□□ 0.16
CALD1-205ENST00000422748 FEZ1Q99689 392 aa16.06■□□□□ 0.16
CALD1-205ENST00000422748 IPO8O15397 1037 aaKnown RBP16.05■□□□□ 0.16
CALD1-205ENST00000422748 ST18O60284 1047 aa16.05■□□□□ 0.16
CALD1-205ENST00000422748 OGFRQ9NZT2 677 aa16.05■□□□□ 0.16
CALD1-205ENST00000422748 DIAPH3Q9NSV4 1193 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms