RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-208ENST00000422704 WASHC4Q2M389 1173 aa12.86□□□□□ -0.35
SEMA4D-208ENST00000422704 KDM5CP41229 1560 aa12.86□□□□□ -0.35
SEMA4D-208ENST00000422704 ABTB2Q8N961 1025 aa12.85□□□□□ -0.35
SEMA4D-208ENST00000422704 CCDC34Q96HJ3 373 aa12.85□□□□□ -0.35
SEMA4D-208ENST00000422704 SIL1Q9H173 461 aa12.85□□□□□ -0.35
SEMA4D-208ENST00000422704 IL1RAPL2Q9NP60 686 aa12.85□□□□□ -0.35
SEMA4D-208ENST00000422704 PRDM15P57071 1507 aaPredicted RBP12.85□□□□□ -0.35
SEMA4D-208ENST00000422704 SAMD1Q6SPF0 538 aaPredicted RBP12.85□□□□□ -0.35
SEMA4D-208ENST00000422704 POGZQ7Z3K3 1410 aa12.85□□□□□ -0.35
SEMA4D-208ENST00000422704 RBM10P98175 930 aaKnown RBP12.85□□□□□ -0.35
SEMA4D-208ENST00000422704 AKAP17AQ02040 695 aaKnown RBP12.85□□□□□ -0.35
SEMA4D-208ENST00000422704 HOMER1Q86YM7 354 aa12.85□□□□□ -0.35
SEMA4D-208ENST00000422704 FYB1O15117 783 aa12.84□□□□□ -0.35
SEMA4D-208ENST00000422704 RAPGEF4Q8WZA2 1011 aa12.84□□□□□ -0.35
SEMA4D-208ENST00000422704 IFT57Q9NWB7 429 aa12.84□□□□□ -0.35
SEMA4D-208ENST00000422704 PLA2R1Q13018 1463 aa12.84□□□□□ -0.35
SEMA4D-208ENST00000422704 DDX54Q8TDD1 881 aaKnown RBP12.84□□□□□ -0.35
SEMA4D-208ENST00000422704 GLI2P10070 1586 aa12.84□□□□□ -0.35
SEMA4D-208ENST00000422704 TRPM2O94759 1503 aa12.84□□□□□ -0.35
SEMA4D-208ENST00000422704 PDE3AQ14432 1141 aa12.84□□□□□ -0.35
SEMA4D-208ENST00000422704 TPM3P06753 285 aa12.83□□□□□ -0.35
SEMA4D-208ENST00000422704 CLASRPQ8N2M8 674 aaKnown RBP12.83□□□□□ -0.35
SEMA4D-208ENST00000422704 CHMP4CQ96CF2 233 aa12.83□□□□□ -0.35
SEMA4D-208ENST00000422704 MLH3Q9UHC1 1453 aa12.83□□□□□ -0.36
SEMA4D-208ENST00000422704 LAMC1P11047 1609 aa12.83□□□□□ -0.36
SEMA4D-208ENST00000422704 FBLN1P23142 703 aa12.83□□□□□ -0.36
SEMA4D-208ENST00000422704 ATF7IPQ6VMQ6 1270 aa12.83□□□□□ -0.36
SEMA4D-208ENST00000422704 DNAJC2Q99543 621 aaKnown RBP12.83□□□□□ -0.36
SEMA4D-208ENST00000422704 STK3Q13188 491 aa12.83□□□□□ -0.36
SEMA4D-208ENST00000422704 CPLX2Q6PUV4 134 aaKnown RBP12.83□□□□□ -0.36
SEMA4D-208ENST00000422704 SDF4Q9BRK5 362 aa12.83□□□□□ -0.36
SEMA4D-208ENST00000422704 FSD1Q9BTV5 496 aa12.83□□□□□ -0.36
SEMA4D-208ENST00000422704 NEURL4Q96JN8 1562 aa12.82□□□□□ -0.36
SEMA4D-208ENST00000422704 KIDINS220Q9ULH0 1771 aa12.82□□□□□ -0.36
SEMA4D-208ENST00000422704 XPCQ01831 940 aaPredicted RBP12.82□□□□□ -0.36
SEMA4D-208ENST00000422704 NFXL1Q6ZNB6 911 aa12.82□□□□□ -0.36
SEMA4D-208ENST00000422704 HECW2Q9P2P5 1572 aa12.82□□□□□ -0.36
SEMA4D-208ENST00000422704 E9PCH4 1651 aa12.82□□□□□ -0.36
SEMA4D-208ENST00000422704 DDX58O95786 925 aaKnown RBP12.82□□□□□ -0.36
SEMA4D-208ENST00000422704 MRE11P49959 708 aa12.82□□□□□ -0.36
SEMA4D-208ENST00000422704 DHX16O60231 1041 aaKnown RBP12.82□□□□□ -0.36
SEMA4D-208ENST00000422704 RBM33Q96EV2 1170 aaKnown RBP12.82□□□□□ -0.36
SEMA4D-208ENST00000422704 RNF17Q9BXT8 1623 aaKnown RBP12.82□□□□□ -0.36
SEMA4D-208ENST00000422704 BCORL1Q5H9F3 1711 aa12.81□□□□□ -0.36
SEMA4D-208ENST00000422704 SYNE3Q6ZMZ3 975 aa12.81□□□□□ -0.36
SEMA4D-208ENST00000422704 SPC24Q8NBT2 197 aa12.81□□□□□ -0.36
SEMA4D-208ENST00000422704 STAC3Q96MF2 364 aa12.81□□□□□ -0.36
SEMA4D-208ENST00000422704 CDK19Q9BWU1 502 aa12.81□□□□□ -0.36
SEMA4D-208ENST00000422704 EXOC6BQ9Y2D4 811 aa12.81□□□□□ -0.36
SEMA4D-208ENST00000422704 PTPRTO14522 1441 aa12.81□□□□□ -0.36
SEMA4D-208ENST00000422704 TRDNQ13061 729 aa12.81□□□□□ -0.36
SEMA4D-208ENST00000422704 RNF20Q5VTR2 975 aa12.81□□□□□ -0.36
SEMA4D-208ENST00000422704 SPHKAPQ2M3C7 1700 aa12.81□□□□□ -0.36
SEMA4D-208ENST00000422704 LMTK2Q8IWU2 1503 aa12.81□□□□□ -0.36
SEMA4D-208ENST00000422704 HDGFL1Q5TGJ6 251 aa12.81□□□□□ -0.36
SEMA4D-208ENST00000422704 TMEM57Q8N5G2 664 aa12.81□□□□□ -0.36
SEMA4D-208ENST00000422704 PRAG1Q86YV5 1406 aa12.81□□□□□ -0.36
SEMA4D-208ENST00000422704 UPF3BQ9BZI7 483 aaKnown RBP12.81□□□□□ -0.36
SEMA4D-208ENST00000422704 MAP3K4Q9Y6R4 1608 aa12.8□□□□□ -0.36
SEMA4D-208ENST00000422704 TRPM1Q7Z4N2 1603 aa12.8□□□□□ -0.36
SEMA4D-208ENST00000422704 SASS6Q6UVJ0 657 aa12.8□□□□□ -0.36
SEMA4D-208ENST00000422704 A2MP01023 1474 aa12.8□□□□□ -0.36
SEMA4D-208ENST00000422704 VPS37DQ86XT2 251 aa12.8□□□□□ -0.36
SEMA4D-208ENST00000422704 CCDC85AQ96PX6 553 aaPredicted RBP12.8□□□□□ -0.36
SEMA4D-208ENST00000422704 A0A0U1RQG5 324 aaPredicted RBP12.8□□□□□ -0.36
SEMA4D-208ENST00000422704 ESCO1Q5FWF5 840 aa12.8□□□□□ -0.36
SEMA4D-208ENST00000422704 MVPQ14764 893 aaKnown RBP12.79□□□□□ -0.36
SEMA4D-208ENST00000422704 RIMBP3CA6NJZ7 1639 aa12.79□□□□□ -0.36
SEMA4D-208ENST00000422704 RIMBP3BA6NNM3 1639 aa12.79□□□□□ -0.36
SEMA4D-208ENST00000422704 RIMBP3Q9UFD9 1639 aa12.79□□□□□ -0.36
SEMA4D-208ENST00000422704 CEP152O94986 1710 aa12.79□□□□□ -0.36
SEMA4D-208ENST00000422704 MROH1Q8NDA8 1641 aa12.79□□□□□ -0.36
SEMA4D-208ENST00000422704 TRIM29Q14134 588 aa12.79□□□□□ -0.36
SEMA4D-208ENST00000422704 TTLL5Q6EMB2 1281 aa12.79□□□□□ -0.36
SEMA4D-208ENST00000422704 WAPLQ7Z5K2 1190 aa12.79□□□□□ -0.36
SEMA4D-208ENST00000422704 SMARCA5O60264 1052 aaPredicted RBP12.79□□□□□ -0.36
SEMA4D-208ENST00000422704 PCMTD1Q96MG8 357 aaPredicted RBP12.79□□□□□ -0.36
SEMA4D-208ENST00000422704 ERC2O15083 957 aa12.78□□□□□ -0.36
SEMA4D-208ENST00000422704 LARP6Q9BRS8 491 aaKnown RBP12.78□□□□□ -0.36
SEMA4D-208ENST00000422704 TMX4Q9H1E5 349 aaPredicted RBP12.78□□□□□ -0.36
SEMA4D-208ENST00000422704 SLFN5Q08AF3 891 aa12.78□□□□□ -0.36
SEMA4D-208ENST00000422704 ZNF771Q7L3S4 317 aaPredicted RBP12.78□□□□□ -0.36
SEMA4D-208ENST00000422704 MCM10Q7L590 875 aa12.78□□□□□ -0.36
SEMA4D-208ENST00000422704 RALYLQ86SE5 291 aaKnown RBP12.78□□□□□ -0.36
SEMA4D-208ENST00000422704 SSH1Q8WYL5 1049 aa12.78□□□□□ -0.36
SEMA4D-208ENST00000422704 TRIM5Q9C035 493 aa12.78□□□□□ -0.36
SEMA4D-208ENST00000422704 GPRASP1Q5JY77 1395 aa12.77□□□□□ -0.36
SEMA4D-208ENST00000422704 MYL6BP14649 208 aa12.77□□□□□ -0.36
SEMA4D-208ENST00000422704 CCDC73Q6ZRK6 1079 aa12.77□□□□□ -0.36
SEMA4D-208ENST00000422704 GNAI3P08754 354 aa12.77□□□□□ -0.37
SEMA4D-208ENST00000422704 CHD1LQ86WJ1 897 aa12.77□□□□□ -0.37
SEMA4D-208ENST00000422704 EFCAB6Q5THR3 1501 aa12.77□□□□□ -0.37
SEMA4D-208ENST00000422704 GOLGA6L1Q8N7Z2 621 aa12.76□□□□□ -0.37
SEMA4D-208ENST00000422704 MCM4P33991 863 aa12.76□□□□□ -0.37
SEMA4D-208ENST00000422704 FERMT3Q86UX7 667 aa12.76□□□□□ -0.37
SEMA4D-208ENST00000422704 TMPOP42166 694 aaKnown RBP12.76□□□□□ -0.37
SEMA4D-208ENST00000422704 GNAI2P04899 355 aa12.76□□□□□ -0.37
SEMA4D-208ENST00000422704 TSR1Q2NL82 804 aaKnown RBP12.76□□□□□ -0.37
SEMA4D-208ENST00000422704 RRP12Q5JTH9 1297 aaKnown RBP12.76□□□□□ -0.37
SEMA4D-208ENST00000422704 CCDC30Q5VVM6 783 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms