RNA–Protein interactions for RNA: ENST00000421538.1

LINC00899-201, long intergenic non-protein coding RNA 899, humanhuman

TSL 1 (best)

Gene LINC00899, Length 2,584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00899-201ENST00000421538 KIF20BQ96Q89 1820 aa17.59■□□□□ 0.41
LINC00899-201ENST00000421538 PMFBP1Q8TBY8 1022 aa17.59■□□□□ 0.41
LINC00899-201ENST00000421538 PCDHB15Q9Y5E8 787 aa17.59■□□□□ 0.41
LINC00899-201ENST00000421538 CHMP5Q9NZZ3 219 aa17.59■□□□□ 0.41
LINC00899-201ENST00000421538 CDC42BPGQ6DT37 1551 aa17.58■□□□□ 0.4
LINC00899-201ENST00000421538 PTCH1Q13635 1447 aa17.58■□□□□ 0.4
LINC00899-201ENST00000421538 KCNA6P17658 529 aa17.58■□□□□ 0.4
LINC00899-201ENST00000421538 FBLN1P23142 703 aa17.58■□□□□ 0.4
LINC00899-201ENST00000421538 ANKLE2Q86XL3 938 aa17.58■□□□□ 0.4
LINC00899-201ENST00000421538 XRN1Q8IZH2 1706 aaKnown RBP17.57■□□□□ 0.4
LINC00899-201ENST00000421538 ESPNB1AK53 854 aa17.57■□□□□ 0.4
LINC00899-201ENST00000421538 PHF23Q9BUL5 403 aaPredicted RBP17.57■□□□□ 0.4
LINC00899-201ENST00000421538 ZRANB1Q9UGI0 708 aa17.57■□□□□ 0.4
LINC00899-201ENST00000421538 NME9Q86XW9 330 aa17.56■□□□□ 0.4
LINC00899-201ENST00000421538 CFAP53Q96M91 514 aa17.56■□□□□ 0.4
LINC00899-201ENST00000421538 GRPEL1Q9HAV7 217 aa17.56■□□□□ 0.4
LINC00899-201ENST00000421538 EDC4Q6P2E9 1401 aaKnown RBP17.56■□□□□ 0.4
LINC00899-201ENST00000421538 ISY1Q9ULR0 285 aaKnown RBP17.55■□□□□ 0.4
LINC00899-201ENST00000421538 MON2Q7Z3U7 1717 aa17.54■□□□□ 0.4
LINC00899-201ENST00000421538 AAMPQ13685 434 aa17.54■□□□□ 0.4
LINC00899-201ENST00000421538 TRIM44Q96DX7 344 aaPredicted RBP17.54■□□□□ 0.4
LINC00899-201ENST00000421538 DDX11L8A8MPP1 907 aa17.54■□□□□ 0.4
LINC00899-201ENST00000421538 AKAP12Q02952 1782 aa17.54■□□□□ 0.4
LINC00899-201ENST00000421538 WDR63Q8IWG1 891 aa17.53■□□□□ 0.4
LINC00899-201ENST00000421538 PDZRN3Q9UPQ7 1066 aa17.53■□□□□ 0.4
LINC00899-201ENST00000421538 TOPAZ1Q8N9V7 1692 aa17.53■□□□□ 0.4
LINC00899-201ENST00000421538 COL3A1P02461 1466 aaPredicted RBP17.53■□□□□ 0.4
LINC00899-201ENST00000421538 ITSN1Q15811 1721 aa17.52■□□□□ 0.4
LINC00899-201ENST00000421538 ACEP12821 1306 aa17.52■□□□□ 0.4
LINC00899-201ENST00000421538 PIK3R4Q99570 1358 aa17.52■□□□□ 0.39
LINC00899-201ENST00000421538 PLEKHG3A1L390 1219 aa17.51■□□□□ 0.39
LINC00899-201ENST00000421538 TPM2P07951 284 aa17.5■□□□□ 0.39
LINC00899-201ENST00000421538 U2AF1L5P0DN76 240 aaPredicted RBP17.5■□□□□ 0.39
LINC00899-201ENST00000421538 U2AF1Q01081 240 aaKnown RBP eCLIP17.5■□□□□ 0.39
LINC00899-201ENST00000421538 ZNF692Q9BU19 519 aaPredicted RBP17.5■□□□□ 0.39
LINC00899-201ENST00000421538 RBM33Q96EV2 1170 aaKnown RBP17.5■□□□□ 0.39
LINC00899-201ENST00000421538 C22orf23Q9BZE7 217 aa17.5■□□□□ 0.39
LINC00899-201ENST00000421538 RWDD1Q9H446 243 aaPredicted RBP17.5■□□□□ 0.39
LINC00899-201ENST00000421538 POLKQ9UBT6 870 aa17.5■□□□□ 0.39
LINC00899-201ENST00000421538 ERBB4Q15303 1308 aa17.5■□□□□ 0.39
LINC00899-201ENST00000421538 RGPD8O14715 1765 aaPredicted RBP17.49■□□□□ 0.39
LINC00899-201ENST00000421538 CHD2O14647 1828 aaKnown RBP17.49■□□□□ 0.39
LINC00899-201ENST00000421538 CCDC27Q2M243 656 aa17.49■□□□□ 0.39
LINC00899-201ENST00000421538 PNPLA6Q8IY17 1366 aa17.48■□□□□ 0.39
LINC00899-201ENST00000421538 HSCBQ8IWL3 235 aa17.48■□□□□ 0.39
LINC00899-201ENST00000421538 U2SURPO15042 1029 aaKnown RBP17.47■□□□□ 0.39
LINC00899-201ENST00000421538 TSR2Q969E8 191 aaKnown RBP17.47■□□□□ 0.39
LINC00899-201ENST00000421538 MAP2P11137 1827 aaKnown RBP17.47■□□□□ 0.39
LINC00899-201ENST00000421538 MFAP1P55081 439 aaKnown RBP17.47■□□□□ 0.39
LINC00899-201ENST00000421538 EMILIN1Q9Y6C2 1016 aa17.47■□□□□ 0.39
LINC00899-201ENST00000421538 TTC21BQ7Z4L5 1316 aa17.47■□□□□ 0.39
LINC00899-201ENST00000421538 NRKQ7Z2Y5 1582 aa17.46■□□□□ 0.39
LINC00899-201ENST00000421538 NPHP4O75161 1426 aaPredicted RBP17.46■□□□□ 0.39
LINC00899-201ENST00000421538 USP6P35125 1406 aa17.46■□□□□ 0.39
LINC00899-201ENST00000421538 COG3Q96JB2 828 aa17.46■□□□□ 0.39
LINC00899-201ENST00000421538 MVPQ14764 893 aaKnown RBP17.45■□□□□ 0.38
LINC00899-201ENST00000421538 PDCL3Q9H2J4 239 aa17.45■□□□□ 0.38
LINC00899-201ENST00000421538 DIAPH1O60610 1272 aaKnown RBP17.44■□□□□ 0.38
LINC00899-201ENST00000421538 RRS1Q15050 365 aaKnown RBP17.43■□□□□ 0.38
LINC00899-201ENST00000421538 ZKSCAN2Q63HK3 967 aa17.43■□□□□ 0.38
LINC00899-201ENST00000421538 HOMEZQ8IX15 550 aa17.43■□□□□ 0.38
LINC00899-201ENST00000421538 PLEKHF1Q96S99 279 aa17.43■□□□□ 0.38
LINC00899-201ENST00000421538 SSH2Q76I76 1423 aa17.43■□□□□ 0.38
LINC00899-201ENST00000421538 NALCNQ8IZF0 1738 aa17.42■□□□□ 0.38
LINC00899-201ENST00000421538 AATKQ6ZMQ8 1374 aa17.42■□□□□ 0.38
LINC00899-201ENST00000421538 FTSJ3Q8IY81 847 aaKnown RBP17.42■□□□□ 0.38
LINC00899-201ENST00000421538 DZIP1LQ8IYY4 767 aaKnown RBP17.42■□□□□ 0.38
LINC00899-201ENST00000421538 EXOSC9Q06265 439 aaKnown RBP17.41■□□□□ 0.38
LINC00899-201ENST00000421538 FMN2Q9NZ56 1722 aa17.41■□□□□ 0.38
LINC00899-201ENST00000421538 NGDNQ8NEJ9 315 aaKnown RBP17.41■□□□□ 0.38
LINC00899-201ENST00000421538 GBP4Q96PP9 640 aa17.41■□□□□ 0.38
LINC00899-201ENST00000421538 OVOS2A0A0J9YW53 1432 aa17.4■□□□□ 0.38
LINC00899-201ENST00000421538 OVOS2Q6IE36 1432 aa17.4■□□□□ 0.38
LINC00899-201ENST00000421538 SKOR2Q2VWA4 1001 aaPredicted RBP17.4■□□□□ 0.38
LINC00899-201ENST00000421538 SMC4Q9NTJ3 1288 aa17.4■□□□□ 0.38
LINC00899-201ENST00000421538 TRIM27P14373 513 aa17.39■□□□□ 0.38
LINC00899-201ENST00000421538 TRIM35Q9UPQ4 493 aa17.39■□□□□ 0.38
LINC00899-201ENST00000421538 ANKARQ7Z5J8 1434 aa17.39■□□□□ 0.37
LINC00899-201ENST00000421538 KIAA1211Q6ZU35 1233 aa17.39■□□□□ 0.37
LINC00899-201ENST00000421538 GAS2L3Q86XJ1 694 aa17.39■□□□□ 0.37
LINC00899-201ENST00000421538 SSH1Q8WYL5 1049 aa17.39■□□□□ 0.37
LINC00899-201ENST00000421538 PTMSP20962 102 aa17.38■□□□□ 0.37
LINC00899-201ENST00000421538 TMPOP42166 694 aaKnown RBP17.38■□□□□ 0.37
LINC00899-201ENST00000421538 TNPO1Q92973 898 aaKnown RBP17.38■□□□□ 0.37
LINC00899-201ENST00000421538 CDK12Q9NYV4 1490 aaPredicted RBP17.38■□□□□ 0.37
LINC00899-201ENST00000421538 IL13P35225 146 aa17.37■□□□□ 0.37
LINC00899-201ENST00000421538 CCDC173Q0VFZ6 552 aa17.36■□□□□ 0.37
LINC00899-201ENST00000421538 ITPRIPQ8IWB1 547 aa17.36■□□□□ 0.37
LINC00899-201ENST00000421538 CIZ1Q9ULV3 898 aaPredicted RBP17.36■□□□□ 0.37
LINC00899-201ENST00000421538 NCOA3Q9Y6Q9 1424 aa17.36■□□□□ 0.37
LINC00899-201ENST00000421538 DDIT3P35638 169 aa17.36■□□□□ 0.37
LINC00899-201ENST00000421538 ANP32BQ92688 251 aaKnown RBP17.36■□□□□ 0.37
LINC00899-201ENST00000421538 SOX12O15370 315 aa17.35■□□□□ 0.37
LINC00899-201ENST00000421538 ADGRL3Q9HAR2 1447 aa17.35■□□□□ 0.37
LINC00899-201ENST00000421538 HSP90AB1P08238 724 aaKnown RBP17.35■□□□□ 0.37
LINC00899-201ENST00000421538 HMOX1P09601 288 aa17.35■□□□□ 0.37
LINC00899-201ENST00000421538 NOB1Q9ULX3 412 aaKnown RBP17.35■□□□□ 0.37
LINC00899-201ENST00000421538 LRRC7Q96NW7 1537 aa17.35■□□□□ 0.37
LINC00899-201ENST00000421538 TTC21AQ8NDW8 1320 aa17.35■□□□□ 0.37
LINC00899-201ENST00000421538 TULP1O00294 542 aaPredicted RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms