RNA–Protein interactions for RNA: ENST00000421386.1

SCG2-202, Transcript of secretogranin II, humanhuman

TSL 3

Gene SCG2, Length 589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-202ENST00000421386 CSPP1Q1MSJ5 1256 aa7.07□□□□□ -1.28
SCG2-202ENST00000421386 FAM174AQ8TBP5 190 aa7.07□□□□□ -1.28
SCG2-202ENST00000421386 SCARF1Q14162 830 aa7.06□□□□□ -1.28
SCG2-202ENST00000421386 QPCTQ16769 361 aa7.06□□□□□ -1.28
SCG2-202ENST00000421386 LIMD1Q9UGP4 676 aa7.06□□□□□ -1.28
SCG2-202ENST00000421386 GJA5P36382 358 aa7.05□□□□□ -1.28
SCG2-202ENST00000421386 GSK3AP49840 483 aa7.05□□□□□ -1.28
SCG2-202ENST00000421386 LOC100996750A0A140TA64 210 aa7.04□□□□□ -1.28
SCG2-202ENST00000421386 PPFIA3O75145 1194 aa7.04□□□□□ -1.28
SCG2-202ENST00000421386 KRT76Q01546 638 aa7.04□□□□□ -1.28
SCG2-202ENST00000421386 RIC3Q7Z5B4 369 aa7.04□□□□□ -1.28
SCG2-202ENST00000421386 KRTAP4-6Q9BYQ5 205 aa7.04□□□□□ -1.28
SCG2-202ENST00000421386 ZBTB3Q9H5J0 574 aa7.04□□□□□ -1.28
SCG2-202ENST00000421386 DNMT3LQ9UJW3 386 aa7.04□□□□□ -1.28
SCG2-202ENST00000421386 CENPJQ9HC77 1338 aaPredicted RBP7.03□□□□□ -1.28
SCG2-202ENST00000421386 FAM181BA6NEQ2 426 aa7.03□□□□□ -1.28
SCG2-202ENST00000421386 GPR161Q8N6U8 529 aaKnown RBP7.03□□□□□ -1.28
SCG2-202ENST00000421386 AK7Q96M32 723 aa7.03□□□□□ -1.28
SCG2-202ENST00000421386 C1QTNF2Q9BXJ5 285 aa7.03□□□□□ -1.28
SCG2-202ENST00000421386 MAN1A2O60476 641 aa7.02□□□□□ -1.29
SCG2-202ENST00000421386 SH3RF1Q7Z6J0 888 aa7.02□□□□□ -1.29
SCG2-202ENST00000421386 LINC00528Q8N1L1 170 aa7.02□□□□□ -1.29
SCG2-202ENST00000421386 MEIOBQ8N635 442 aa7.02□□□□□ -1.29
SCG2-202ENST00000421386 SOS2Q07890 1332 aaPredicted RBP7.01□□□□□ -1.29
SCG2-202ENST00000421386 FSHRP23945 695 aa7.01□□□□□ -1.29
SCG2-202ENST00000421386 NR5A1Q13285 461 aa7.01□□□□□ -1.29
SCG2-202ENST00000421386 MYSM1Q5VVJ2 828 aa7.01□□□□□ -1.29
SCG2-202ENST00000421386 TSC1Q92574 1164 aa7.01□□□□□ -1.29
SCG2-202ENST00000421386 BCANQ96GW7 911 aa7.01□□□□□ -1.29
SCG2-202ENST00000421386 BMP2P12643 396 aa7□□□□□ -1.29
SCG2-202ENST00000421386 AGERQ15109 404 aa7□□□□□ -1.29
SCG2-202ENST00000421386 PRPF38BQ5VTL8 546 aaKnown RBP7□□□□□ -1.29
SCG2-202ENST00000421386 IPO9Q96P70 1041 aaKnown RBP7□□□□□ -1.29
SCG2-202ENST00000421386 SLC24A3Q9HC58 644 aa7□□□□□ -1.29
SCG2-202ENST00000421386 LILRB3O75022 631 aa6.99□□□□□ -1.29
SCG2-202ENST00000421386 CALD1Q05682 793 aaKnown RBP6.99□□□□□ -1.29
SCG2-202ENST00000421386 PDE4DQ08499 809 aa6.99□□□□□ -1.29
SCG2-202ENST00000421386 HSP90AA2PQ14568 343 aaPredicted RBP6.99□□□□□ -1.29
SCG2-202ENST00000421386 SH3BP5LQ7L8J4 393 aa6.99□□□□□ -1.29
SCG2-202ENST00000421386 PPM1GO15355 546 aaPredicted RBP6.98□□□□□ -1.29
SCG2-202ENST00000421386 FBXO31Q5XUX0 539 aaPredicted RBP6.98□□□□□ -1.29
SCG2-202ENST00000421386 BPHLQ86WA6 291 aaPredicted RBP6.98□□□□□ -1.29
SCG2-202ENST00000421386 ANP32AP39687 249 aaKnown RBP6.97□□□□□ -1.29
SCG2-202ENST00000421386 CBLBQ13191 982 aa6.97□□□□□ -1.29
SCG2-202ENST00000421386 EEA1Q15075 1411 aa6.97□□□□□ -1.29
SCG2-202ENST00000421386 HOMEZQ8IX15 550 aa6.97□□□□□ -1.29
SCG2-202ENST00000421386 ZCCHC6Q5VYS8 1495 aaKnown RBP6.97□□□□□ -1.29
SCG2-202ENST00000421386 MAGEB6P1A0A0J9YX57 407 aa6.96□□□□□ -1.3
SCG2-202ENST00000421386 A0A0U1RQG5 324 aaPredicted RBP6.96□□□□□ -1.3
SCG2-202ENST00000421386 FIGNL2A6NMB9 653 aa6.96□□□□□ -1.3
SCG2-202ENST00000421386 CCER2I3L3R5 266 aa6.96□□□□□ -1.3
SCG2-202ENST00000421386 BRD2P25440 801 aaKnown RBP6.96□□□□□ -1.3
SCG2-202ENST00000421386 DIXDC1Q155Q3 683 aa6.96□□□□□ -1.3
SCG2-202ENST00000421386 KCTD17Q8N5Z5 321 aa6.96□□□□□ -1.3
SCG2-202ENST00000421386 CARD14Q9BXL6 1004 aa6.96□□□□□ -1.3
SCG2-202ENST00000421386 PPP4R2Q9NY27 417 aa6.96□□□□□ -1.3
SCG2-202ENST00000421386 NEFMP07197 916 aa6.95□□□□□ -1.3
SCG2-202ENST00000421386 NCLP19338 710 aaKnown RBP6.95□□□□□ -1.3
SCG2-202ENST00000421386 ERFEQ4G0M1 354 aa6.95□□□□□ -1.3
SCG2-202ENST00000421386 RNFT1Q5M7Z0 435 aa6.95□□□□□ -1.3
SCG2-202ENST00000421386 VASH1Q7L8A9 365 aaPredicted RBP6.95□□□□□ -1.3
SCG2-202ENST00000421386 TRMT44Q8IYL2 757 aaKnown RBP6.95□□□□□ -1.3
SCG2-202ENST00000421386 CNTNAP3BQ96NU0 1288 aa6.95□□□□□ -1.3
SCG2-202ENST00000421386 CNTNAP3Q9BZ76 1288 aa6.95□□□□□ -1.3
SCG2-202ENST00000421386 MAP4K5Q9Y4K4 846 aa6.95□□□□□ -1.3
SCG2-202ENST00000421386 NUTM2BA6NNL0 878 aaPredicted RBP6.94□□□□□ -1.3
SCG2-202ENST00000421386 NUTM2EB1AL46 878 aaPredicted RBP6.94□□□□□ -1.3
SCG2-202ENST00000421386 PTSQ03393 145 aa6.94□□□□□ -1.3
SCG2-202ENST00000421386 NUTM2DQ5VT03 806 aaPredicted RBP6.94□□□□□ -1.3
SCG2-202ENST00000421386 NUTM2AQ8IVF1 878 aaPredicted RBP6.94□□□□□ -1.3
SCG2-202ENST00000421386 CCDC116Q8IYX3 515 aa6.94□□□□□ -1.3
SCG2-202ENST00000421386 TIMELESSQ9UNS1 1208 aa6.94□□□□□ -1.3
SCG2-202ENST00000421386 TTLL8A6PVC2 850 aa6.93□□□□□ -1.3
SCG2-202ENST00000421386 HSP90AA1P07900 732 aaKnown RBP6.93□□□□□ -1.3
SCG2-202ENST00000421386 KCNMA1Q12791 1236 aa6.93□□□□□ -1.3
SCG2-202ENST00000421386 SUZ12Q15022 739 aaKnown RBP6.93□□□□□ -1.3
SCG2-202ENST00000421386 WHAMMQ8TF30 809 aa6.93□□□□□ -1.3
SCG2-202ENST00000421386 OCSTAMPQ9BR26 566 aa6.93□□□□□ -1.3
SCG2-202ENST00000421386 ITGAEP38570 1179 aa6.92□□□□□ -1.3
SCG2-202ENST00000421386 CTDSPL2Q05D32 466 aa6.92□□□□□ -1.3
SCG2-202ENST00000421386 TUSC1Q2TAM9 212 aa6.92□□□□□ -1.3
SCG2-202ENST00000421386 PPP1R26Q5T8A7 1209 aaPredicted RBP6.92□□□□□ -1.3
SCG2-202ENST00000421386 IPO4Q8TEX9 1081 aaKnown RBP6.92□□□□□ -1.3
SCG2-202ENST00000421386 AGBL1Q96MI9 1066 aa6.92□□□□□ -1.3
SCG2-202ENST00000421386 PRDM4Q9UKN5 801 aa6.92□□□□□ -1.3
SCG2-202ENST00000421386 UPP2O95045 317 aa6.91□□□□□ -1.3
SCG2-202ENST00000421386 NBPF14Q5TI25 921 aa6.91□□□□□ -1.3
SCG2-202ENST00000421386 Q6ZVU0 165 aa6.91□□□□□ -1.3
SCG2-202ENST00000421386 LRRN4Q8WUT4 740 aa6.91□□□□□ -1.3
SCG2-202ENST00000421386 TSEN34Q9BSV6 310 aaKnown RBP6.91□□□□□ -1.3
SCG2-202ENST00000421386 COL25A1Q9BXS0 654 aaPredicted RBP6.91□□□□□ -1.3
SCG2-202ENST00000421386 POLR3EQ9NVU0 708 aa6.91□□□□□ -1.3
SCG2-202ENST00000421386 BRPF3Q9ULD4 1205 aa6.91□□□□□ -1.3
SCG2-202ENST00000421386 CLK2P49760 499 aaKnown RBP6.9□□□□□ -1.3
SCG2-202ENST00000421386 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.9□□□□□ -1.3
SCG2-202ENST00000421386 ZNF385CQ66K41 422 aaPredicted RBP6.9□□□□□ -1.3
SCG2-202ENST00000421386 CCDC155Q8N6L0 562 aa6.9□□□□□ -1.3
SCG2-202ENST00000421386 PDCL3Q9H2J4 239 aa6.9□□□□□ -1.3
SCG2-202ENST00000421386 EMILIN1Q9Y6C2 1016 aa6.9□□□□□ -1.3
SCG2-202ENST00000421386 SPINT1O43278 529 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms