RNA–Protein interactions for RNA: ENST00000421230.6

PPFIA3-202, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 2,236 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-202ENST00000421230 RCAN3Q9UKA8 241 aa23.69■■□□□ 1.38
PPFIA3-202ENST00000421230 MS4A1P11836 297 aa23.68■■□□□ 1.38
PPFIA3-202ENST00000421230 PXDNQ92626 1479 aa23.68■■□□□ 1.38
PPFIA3-202ENST00000421230 PDE3BQ13370 1112 aa23.67■■□□□ 1.38
PPFIA3-202ENST00000421230 HSP90AB2PQ58FF8 381 aa23.67■■□□□ 1.38
PPFIA3-202ENST00000421230 ALS2Q96Q42 1657 aa23.67■■□□□ 1.38
PPFIA3-202ENST00000421230 PDE4AP27815 886 aa23.67■■□□□ 1.38
PPFIA3-202ENST00000421230 IL13P35225 146 aa23.65■■□□□ 1.38
PPFIA3-202ENST00000421230 APAF1O14727 1248 aa23.65■■□□□ 1.38
PPFIA3-202ENST00000421230 AMPHP49418 695 aa23.65■■□□□ 1.38
PPFIA3-202ENST00000421230 BACH2Q9BYV9 841 aa23.65■■□□□ 1.38
PPFIA3-202ENST00000421230 SBNO1A3KN83 1393 aa23.65■■□□□ 1.38
PPFIA3-202ENST00000421230 GCP02774 474 aa23.63■■□□□ 1.37
PPFIA3-202ENST00000421230 NFAT5O94916 1531 aa23.62■■□□□ 1.37
PPFIA3-202ENST00000421230 TNS3Q68CZ2 1445 aa23.62■■□□□ 1.37
PPFIA3-202ENST00000421230 ZBTB7CA1YPR0 619 aa23.62■■□□□ 1.37
PPFIA3-202ENST00000421230 EIF4A2Q14240 407 aaKnown RBP23.62■■□□□ 1.37
PPFIA3-202ENST00000421230 USP35Q9P2H5 1018 aa23.62■■□□□ 1.37
PPFIA3-202ENST00000421230 SPATA31A3Q5VYP0 1347 aa23.62■■□□□ 1.37
PPFIA3-202ENST00000421230 KCNH5Q8NCM2 988 aa23.61■■□□□ 1.37
PPFIA3-202ENST00000421230 RUNDC1Q96C34 613 aa23.61■■□□□ 1.37
PPFIA3-202ENST00000421230 FLT4P35916 1363 aa23.61■■□□□ 1.37
PPFIA3-202ENST00000421230 LTN1O94822 1766 aa23.61■■□□□ 1.37
PPFIA3-202ENST00000421230 USP19O94966 1318 aa23.61■■□□□ 1.37
PPFIA3-202ENST00000421230 SOS2Q07890 1332 aaPredicted RBP23.6■■□□□ 1.37
PPFIA3-202ENST00000421230 HMOX1P09601 288 aa23.6■■□□□ 1.37
PPFIA3-202ENST00000421230 SLIT3O75094 1523 aa23.6■■□□□ 1.37
PPFIA3-202ENST00000421230 HOXC9P31274 260 aa23.59■■□□□ 1.37
PPFIA3-202ENST00000421230 CABLES1Q8TDN4 633 aa23.59■■□□□ 1.37
PPFIA3-202ENST00000421230 MED1Q15648 1581 aaPredicted RBP23.59■■□□□ 1.37
PPFIA3-202ENST00000421230 NPM2Q86SE8 214 aaKnown RBP23.58■■□□□ 1.37
PPFIA3-202ENST00000421230 TCP11L2Q8N4U5 519 aa23.57■■□□□ 1.36
PPFIA3-202ENST00000421230 RRP7AQ9Y3A4 280 aaKnown RBP23.57■■□□□ 1.36
PPFIA3-202ENST00000421230 NEUROD2Q15784 382 aa23.57■■□□□ 1.36
PPFIA3-202ENST00000421230 PLEKHF1Q96S99 279 aa23.57■■□□□ 1.36
PPFIA3-202ENST00000421230 ROBO1Q9Y6N7 1651 aa23.57■■□□□ 1.36
PPFIA3-202ENST00000421230 NHSL1Q5SYE7 1610 aa23.56■■□□□ 1.36
PPFIA3-202ENST00000421230 RSPH6AQ9H0K4 717 aa23.55■■□□□ 1.36
PPFIA3-202ENST00000421230 FCHSD2O94868 740 aa23.55■■□□□ 1.36
PPFIA3-202ENST00000421230 ZC3H6P61129 1189 aaKnown RBP23.55■■□□□ 1.36
PPFIA3-202ENST00000421230 LTV1Q96GA3 475 aaPredicted RBP23.55■■□□□ 1.36
PPFIA3-202ENST00000421230 ARHGEF10O15013 1369 aa23.54■■□□□ 1.36
PPFIA3-202ENST00000421230 PRKAR2BP31323 418 aa23.54■■□□□ 1.36
PPFIA3-202ENST00000421230 ARHGEF25Q86VW2 580 aa23.54■■□□□ 1.36
PPFIA3-202ENST00000421230 KIF24Q5T7B8 1368 aa23.54■■□□□ 1.36
PPFIA3-202ENST00000421230 IP6K1Q92551 441 aa23.53■■□□□ 1.36
PPFIA3-202ENST00000421230 IQSEC2Q5JU85 1478 aa23.53■■□□□ 1.36
PPFIA3-202ENST00000421230 AEBP1Q8IUX7 1158 aa23.53■■□□□ 1.36
PPFIA3-202ENST00000421230 CDCA7LQ96GN5 454 aa23.53■■□□□ 1.36
PPFIA3-202ENST00000421230 PHRF1Q9P1Y6 1649 aaKnown RBP23.52■■□□□ 1.36
PPFIA3-202ENST00000421230 RTL1A6NKG5 1358 aa23.52■■□□□ 1.36
PPFIA3-202ENST00000421230 MAPK8IP3Q9UPT6 1336 aa23.52■■□□□ 1.36
PPFIA3-202ENST00000421230 NEFMP07197 916 aa23.52■■□□□ 1.36
PPFIA3-202ENST00000421230 SULT6B1Q6IMI4 303 aa23.52■■□□□ 1.36
PPFIA3-202ENST00000421230 PNNQ9H307 717 aaKnown RBP23.5■■□□□ 1.35
PPFIA3-202ENST00000421230 LAS1LQ9Y4W2 734 aaKnown RBP23.5■■□□□ 1.35
PPFIA3-202ENST00000421230 RGPD1P0DJD0 1748 aa23.5■■□□□ 1.35
PPFIA3-202ENST00000421230 ZNF521Q96K83 1311 aa23.5■■□□□ 1.35
PPFIA3-202ENST00000421230 PIP4K2BP78356 416 aa23.49■■□□□ 1.35
PPFIA3-202ENST00000421230 PHACTR3Q96KR7 559 aa23.49■■□□□ 1.35
PPFIA3-202ENST00000421230 CRYBG1Q9Y4K1 1723 aa23.49■■□□□ 1.35
PPFIA3-202ENST00000421230 EYA1Q99502 592 aa23.49■■□□□ 1.35
PPFIA3-202ENST00000421230 TOM1O60784 492 aa23.48■■□□□ 1.35
PPFIA3-202ENST00000421230 AXIN2Q9Y2T1 843 aa23.47■■□□□ 1.35
PPFIA3-202ENST00000421230 TMPOP42166 694 aaKnown RBP23.47■■□□□ 1.35
PPFIA3-202ENST00000421230 WWC1Q8IX03 1113 aa23.46■■□□□ 1.35
PPFIA3-202ENST00000421230 UBAP1LF5GYI3 381 aa23.45■■□□□ 1.35
PPFIA3-202ENST00000421230 IL27Q8NEV9 243 aa23.45■■□□□ 1.35
PPFIA3-202ENST00000421230 CHRNA2Q15822 529 aa23.44■■□□□ 1.34
PPFIA3-202ENST00000421230 NGEFQ8N5V2 710 aa23.44■■□□□ 1.34
PPFIA3-202ENST00000421230 DDRGK1Q96HY6 314 aa23.44■■□□□ 1.34
PPFIA3-202ENST00000421230 RGPD5Q99666 1765 aa23.44■■□□□ 1.34
PPFIA3-202ENST00000421230 IGSF1Q8N6C5 1336 aa23.44■■□□□ 1.34
PPFIA3-202ENST00000421230 AHDC1Q5TGY3 1603 aaPredicted RBP23.44■■□□□ 1.34
PPFIA3-202ENST00000421230 GOLGA2Q08379 1002 aa23.44■■□□□ 1.34
PPFIA3-202ENST00000421230 USHBP1Q8N6Y0 703 aa23.43■■□□□ 1.34
PPFIA3-202ENST00000421230 KIAA0232Q92628 1395 aa23.43■■□□□ 1.34
PPFIA3-202ENST00000421230 HAP1P54257 671 aaPredicted RBP23.43■■□□□ 1.34
PPFIA3-202ENST00000421230 RIPK4P57078 832 aa23.43■■□□□ 1.34
PPFIA3-202ENST00000421230 CRBNQ96SW2 442 aa23.43■■□□□ 1.34
PPFIA3-202ENST00000421230 PLIN1O60240 522 aa23.42■■□□□ 1.34
PPFIA3-202ENST00000421230 LRRC59Q96AG4 307 aaKnown RBP23.42■■□□□ 1.34
PPFIA3-202ENST00000421230 PHF23Q9BUL5 403 aaPredicted RBP23.42■■□□□ 1.34
PPFIA3-202ENST00000421230 SPINK5Q9NQ38 1064 aaPredicted RBP23.42■■□□□ 1.34
PPFIA3-202ENST00000421230 ANKRD24Q8TF21 1146 aa23.41■■□□□ 1.34
PPFIA3-202ENST00000421230 RGPD2P0DJD1 1756 aa23.41■■□□□ 1.34
PPFIA3-202ENST00000421230 NBPF6Q5VWK0 638 aa23.41■■□□□ 1.34
PPFIA3-202ENST00000421230 NBPF4Q96M43 638 aa23.41■■□□□ 1.34
PPFIA3-202ENST00000421230 TRIM35Q9UPQ4 493 aa23.4■■□□□ 1.34
PPFIA3-202ENST00000421230 CCDC27Q2M243 656 aa23.4■■□□□ 1.34
PPFIA3-202ENST00000421230 ABCA3Q99758 1704 aa23.39■■□□□ 1.34
PPFIA3-202ENST00000421230 NFE2L2Q16236 605 aa23.39■■□□□ 1.34
PPFIA3-202ENST00000421230 KDRP35968 1356 aa23.39■■□□□ 1.33
PPFIA3-202ENST00000421230 CERKQ8TCT0 537 aa23.39■■□□□ 1.33
PPFIA3-202ENST00000421230 PHLPP1O60346 1717 aa23.38■■□□□ 1.33
PPFIA3-202ENST00000421230 COL18A1P39060 1754 aa23.38■■□□□ 1.33
PPFIA3-202ENST00000421230 SLFN5Q08AF3 891 aa23.38■■□□□ 1.33
PPFIA3-202ENST00000421230 CPDO75976 1380 aa23.37■■□□□ 1.33
PPFIA3-202ENST00000421230 KDM2BQ8NHM5 1336 aa23.37■■□□□ 1.33
PPFIA3-202ENST00000421230 ANO8Q9HCE9 1232 aaPredicted RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms