RNA–Protein interactions for RNA: ENST00000420940.6

WDR48-203, Transcript of WD repeat domain 48, humanhuman

TSL 1 (best)

Gene WDR48, Length 3,772 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR48-203ENST00000420940 ZNF692Q9BU19 519 aaPredicted RBP7.5□□□□□ -1.21
WDR48-203ENST00000420940 FAM69CQ0P6D2 419 aa7.49□□□□□ -1.21
WDR48-203ENST00000420940 TSR2Q969E8 191 aaKnown RBP7.49□□□□□ -1.21
WDR48-203ENST00000420940 PLEKHG1Q9ULL1 1385 aa7.49□□□□□ -1.21
WDR48-203ENST00000420940 NCAPD2Q15021 1401 aa7.49□□□□□ -1.21
WDR48-203ENST00000420940 TMPOP42166 694 aaKnown RBP7.49□□□□□ -1.21
WDR48-203ENST00000420940 CABP1Q9NZU7 370 aa7.49□□□□□ -1.21
WDR48-203ENST00000420940 SHANK3Q9BYB0 1731 aa7.49□□□□□ -1.21
WDR48-203ENST00000420940 USP6P35125 1406 aa7.49□□□□□ -1.21
WDR48-203ENST00000420940 NGEFQ8N5V2 710 aa7.49□□□□□ -1.21
WDR48-203ENST00000420940 SIRT1Q96EB6 747 aa7.49□□□□□ -1.21
WDR48-203ENST00000420940 C5P01031 1676 aa7.48□□□□□ -1.21
WDR48-203ENST00000420940 MINK1Q8N4C8 1332 aaPredicted RBP7.48□□□□□ -1.21
WDR48-203ENST00000420940 TRIM27P14373 513 aa7.48□□□□□ -1.21
WDR48-203ENST00000420940 LTBP4Q8N2S1 1624 aa7.48□□□□□ -1.21
WDR48-203ENST00000420940 TNNT2P45379 298 aaPredicted RBP7.48□□□□□ -1.21
WDR48-203ENST00000420940 KIF2CQ99661 725 aa7.47□□□□□ -1.21
WDR48-203ENST00000420940 KDRP35968 1356 aa7.47□□□□□ -1.21
WDR48-203ENST00000420940 TSPYL6Q8N831 410 aa7.47□□□□□ -1.21
WDR48-203ENST00000420940 SSH1Q8WYL5 1049 aa7.47□□□□□ -1.21
WDR48-203ENST00000420940 ANO8Q9HCE9 1232 aaPredicted RBP7.47□□□□□ -1.21
WDR48-203ENST00000420940 IL16Q14005 1332 aa7.47□□□□□ -1.21
WDR48-203ENST00000420940 SAFB2Q14151 953 aaKnown RBP eCLIP7.46□□□□□ -1.21
WDR48-203ENST00000420940 GSE1Q14687 1217 aa7.46□□□□□ -1.21
WDR48-203ENST00000420940 MORC1Q86VD1 984 aa7.46□□□□□ -1.21
WDR48-203ENST00000420940 CLUAP1Q96AJ1 413 aa7.46□□□□□ -1.21
WDR48-203ENST00000420940 EMILIN1Q9Y6C2 1016 aa7.46□□□□□ -1.21
WDR48-203ENST00000420940 WDR43Q15061 677 aaKnown RBP eCLIP7.46□□□□□ -1.22
WDR48-203ENST00000420940 ZBTB40Q9NUA8 1239 aa7.46□□□□□ -1.22
WDR48-203ENST00000420940 COG6Q9Y2V7 657 aa7.46□□□□□ -1.22
WDR48-203ENST00000420940 FSD2A1L4K1 749 aa7.46□□□□□ -1.22
WDR48-203ENST00000420940 PPM1GO15355 546 aaPredicted RBP7.46□□□□□ -1.22
WDR48-203ENST00000420940 NEFMP07197 916 aa7.46□□□□□ -1.22
WDR48-203ENST00000420940 NME9Q86XW9 330 aa7.46□□□□□ -1.22
WDR48-203ENST00000420940 FRAT1Q92837 279 aaPredicted RBP7.46□□□□□ -1.22
WDR48-203ENST00000420940 CACNA1FO60840 1977 aa7.45□□□□□ -1.22
WDR48-203ENST00000420940 MYCNP04198 464 aaPredicted RBP7.45□□□□□ -1.22
WDR48-203ENST00000420940 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.45□□□□□ -1.22
WDR48-203ENST00000420940 WASLO00401 505 aaPredicted RBP7.45□□□□□ -1.22
WDR48-203ENST00000420940 SLC24A1O60721 1099 aa7.45□□□□□ -1.22
WDR48-203ENST00000420940 TBC1D32Q96NH3 1257 aa7.45□□□□□ -1.22
WDR48-203ENST00000420940 ABCC4O15439 1325 aa7.45□□□□□ -1.22
WDR48-203ENST00000420940 DDRGK1Q96HY6 314 aa7.45□□□□□ -1.22
WDR48-203ENST00000420940 STK26Q9P289 416 aa7.45□□□□□ -1.22
WDR48-203ENST00000420940 LAS1LQ9Y4W2 734 aaKnown RBP7.45□□□□□ -1.22
WDR48-203ENST00000420940 TNRQ92752 1358 aa7.44□□□□□ -1.22
WDR48-203ENST00000420940 BCL2L13Q9BXK5 485 aa7.44□□□□□ -1.22
WDR48-203ENST00000420940 SLIT3O75094 1523 aa7.44□□□□□ -1.22
WDR48-203ENST00000420940 BRPF3Q9ULD4 1205 aa7.44□□□□□ -1.22
WDR48-203ENST00000420940 EXOSC9Q06265 439 aaKnown RBP7.44□□□□□ -1.22
WDR48-203ENST00000420940 MVPQ14764 893 aaKnown RBP7.44□□□□□ -1.22
WDR48-203ENST00000420940 ERICH6Q7L0X2 663 aa7.44□□□□□ -1.22
WDR48-203ENST00000420940 VAMP4O75379 141 aa7.43□□□□□ -1.22
WDR48-203ENST00000420940 FRAT2O75474 233 aaPredicted RBP7.43□□□□□ -1.22
WDR48-203ENST00000420940 SLC4A3P48751 1232 aa7.43□□□□□ -1.22
WDR48-203ENST00000420940 ABCA3Q99758 1704 aa7.43□□□□□ -1.22
WDR48-203ENST00000420940 AAMPQ13685 434 aa7.43□□□□□ -1.22
WDR48-203ENST00000420940 MST1RQ04912 1400 aa7.43□□□□□ -1.22
WDR48-203ENST00000420940 CHGAP10645 457 aaKnown RBP7.43□□□□□ -1.22
WDR48-203ENST00000420940 HDAC1Q13547 482 aaPredicted RBP7.43□□□□□ -1.22
WDR48-203ENST00000420940 SMC5Q8IY18 1101 aa7.43□□□□□ -1.22
WDR48-203ENST00000420940 THUMPD2Q9BTF0 503 aaKnown RBP7.43□□□□□ -1.22
WDR48-203ENST00000420940 ZBTB7BO15156 539 aaPredicted RBP7.42□□□□□ -1.22
WDR48-203ENST00000420940 PAPPAQ13219 1627 aa7.42□□□□□ -1.22
WDR48-203ENST00000420940 MSH6P52701 1360 aa7.42□□□□□ -1.22
WDR48-203ENST00000420940 MRPL50Q8N5N7 158 aaKnown RBP7.42□□□□□ -1.22
WDR48-203ENST00000420940 SCN11AQ9UI33 1791 aa7.42□□□□□ -1.22
WDR48-203ENST00000420940 NPM1P06748 294 aaKnown RBP eCLIP7.42□□□□□ -1.22
WDR48-203ENST00000420940 AEBP1Q8IUX7 1158 aa7.42□□□□□ -1.22
WDR48-203ENST00000420940 PLEKHG3A1L390 1219 aa7.41□□□□□ -1.22
WDR48-203ENST00000420940 FAM83GA6ND36 823 aa7.41□□□□□ -1.22
WDR48-203ENST00000420940 PKD1L3Q7Z443 1732 aa7.41□□□□□ -1.22
WDR48-203ENST00000420940 DDX60Q8IY21 1712 aaKnown RBP7.41□□□□□ -1.22
WDR48-203ENST00000420940 UBR2Q8IWV8 1755 aa7.41□□□□□ -1.22
WDR48-203ENST00000420940 AK9Q5TCS8 1911 aa7.41□□□□□ -1.22
WDR48-203ENST00000420940 TXNDC2Q86VQ3 553 aa7.41□□□□□ -1.22
WDR48-203ENST00000420940 TMEM57Q8N5G2 664 aa7.41□□□□□ -1.22
WDR48-203ENST00000420940 MBIPQ9NS73 344 aa7.41□□□□□ -1.22
WDR48-203ENST00000420940 MAPK8IP3Q9UPT6 1336 aa7.4□□□□□ -1.22
WDR48-203ENST00000420940 C8orf58Q8NAV2 365 aa7.4□□□□□ -1.22
WDR48-203ENST00000420940 PDZRN3Q9UPQ7 1066 aa7.4□□□□□ -1.22
WDR48-203ENST00000420940 TRHP20396 242 aaPredicted RBP7.4□□□□□ -1.22
WDR48-203ENST00000420940 NOB1Q9ULX3 412 aaKnown RBP7.4□□□□□ -1.22
WDR48-203ENST00000420940 SALL3Q9BXA9 1300 aa7.4□□□□□ -1.23
WDR48-203ENST00000420940 FCHSD2O94868 740 aa7.4□□□□□ -1.23
WDR48-203ENST00000420940 NUDT16Q96DE0 195 aaKnown RBP7.4□□□□□ -1.23
WDR48-203ENST00000420940 PXDNQ92626 1479 aa7.4□□□□□ -1.23
WDR48-203ENST00000420940 TJP1Q07157 1748 aa7.39□□□□□ -1.23
WDR48-203ENST00000420940 NUP188Q5SRE5 1749 aa7.39□□□□□ -1.23
WDR48-203ENST00000420940 EIF4A2Q14240 407 aaKnown RBP7.39□□□□□ -1.23
WDR48-203ENST00000420940 KRT24Q2M2I5 525 aa7.39□□□□□ -1.23
WDR48-203ENST00000420940 CD2BP2O95400 341 aaKnown RBP7.39□□□□□ -1.23
WDR48-203ENST00000420940 RRS1Q15050 365 aaKnown RBP7.39□□□□□ -1.23
WDR48-203ENST00000420940 NEUROD2Q15784 382 aa7.39□□□□□ -1.23
WDR48-203ENST00000420940 TBC1D2Q9BYX2 928 aa7.39□□□□□ -1.23
WDR48-203ENST00000420940 ATF5Q9Y2D1 282 aaPredicted RBP7.39□□□□□ -1.23
WDR48-203ENST00000420940 PARP4Q9UKK3 1724 aaKnown RBP7.39□□□□□ -1.23
WDR48-203ENST00000420940 CT47B1P0C2W7 299 aaPredicted RBP7.39□□□□□ -1.23
WDR48-203ENST00000420940 PRKAR2BP31323 418 aa7.38□□□□□ -1.23
WDR48-203ENST00000420940 ATF7IPQ6VMQ6 1270 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms