RNA–Protein interactions for RNA: ENST00000419499.1

LINC00402-201, long intergenic non-protein coding RNA 402, humanhuman

TSL 2 BASIC

Gene LINC00402, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00402-201ENST00000419499 RIPK4P57078 832 aa12.69□□□□□ -0.38
LINC00402-201ENST00000419499 EIF4A2Q14240 407 aaKnown RBP12.68□□□□□ -0.38
LINC00402-201ENST00000419499 TSR2Q969E8 191 aaKnown RBP12.68□□□□□ -0.38
LINC00402-201ENST00000419499 MST1RQ04912 1400 aa12.68□□□□□ -0.38
LINC00402-201ENST00000419499 CRYBG1Q9Y4K1 1723 aa12.68□□□□□ -0.38
LINC00402-201ENST00000419499 XIRP1Q702N8 1843 aaKnown RBP12.68□□□□□ -0.38
LINC00402-201ENST00000419499 ZNF853P0CG23 659 aa12.68□□□□□ -0.38
LINC00402-201ENST00000419499 CENPQQ7L2Z9 268 aaPredicted RBP12.68□□□□□ -0.38
LINC00402-201ENST00000419499 FLT4P35916 1363 aa12.68□□□□□ -0.38
LINC00402-201ENST00000419499 RLBP1P12271 317 aa12.67□□□□□ -0.38
LINC00402-201ENST00000419499 PLPPR3Q6T4P5 718 aa12.67□□□□□ -0.38
LINC00402-201ENST00000419499 N4BP2Q86UW6 1770 aaPredicted RBP12.67□□□□□ -0.38
LINC00402-201ENST00000419499 MS4A1P11836 297 aa12.66□□□□□ -0.38
LINC00402-201ENST00000419499 BRPF1P55201 1214 aaPredicted RBP12.66□□□□□ -0.38
LINC00402-201ENST00000419499 TCERG1O14776 1098 aaKnown RBP12.66□□□□□ -0.38
LINC00402-201ENST00000419499 HMOX1P09601 288 aa12.66□□□□□ -0.38
LINC00402-201ENST00000419499 RGPD2P0DJD1 1756 aa12.66□□□□□ -0.38
LINC00402-201ENST00000419499 MAP3K19Q56UN5 1328 aa12.66□□□□□ -0.38
LINC00402-201ENST00000419499 NUTM2FA1L443 756 aa12.65□□□□□ -0.38
LINC00402-201ENST00000419499 LMO7Q8WWI1 1683 aa12.65□□□□□ -0.38
LINC00402-201ENST00000419499 FAM208AQ9UK61 1670 aaKnown RBP12.65□□□□□ -0.38
LINC00402-201ENST00000419499 RTL1A6NKG5 1358 aa12.65□□□□□ -0.38
LINC00402-201ENST00000419499 EXOSC9Q06265 439 aaKnown RBP12.65□□□□□ -0.38
LINC00402-201ENST00000419499 TNNQ9UQP3 1299 aa12.65□□□□□ -0.38
LINC00402-201ENST00000419499 MED1Q15648 1581 aaPredicted RBP12.65□□□□□ -0.38
LINC00402-201ENST00000419499 PPM1GO15355 546 aaPredicted RBP12.65□□□□□ -0.38
LINC00402-201ENST00000419499 AAMPQ13685 434 aa12.65□□□□□ -0.38
LINC00402-201ENST00000419499 PMFBP1Q8TBY8 1022 aa12.65□□□□□ -0.38
LINC00402-201ENST00000419499 PANK1Q8TE04 598 aa12.64□□□□□ -0.39
LINC00402-201ENST00000419499 IGSF1Q8N6C5 1336 aa12.64□□□□□ -0.39
LINC00402-201ENST00000419499 NCAPD2Q15021 1401 aa12.64□□□□□ -0.39
LINC00402-201ENST00000419499 MSH5O43196 834 aa12.64□□□□□ -0.39
LINC00402-201ENST00000419499 CLUAP1Q96AJ1 413 aa12.64□□□□□ -0.39
LINC00402-201ENST00000419499 IFT57Q9NWB7 429 aa12.64□□□□□ -0.39
LINC00402-201ENST00000419499 CRB1P82279 1406 aa12.63□□□□□ -0.39
LINC00402-201ENST00000419499 AEBP1Q8IUX7 1158 aa12.63□□□□□ -0.39
LINC00402-201ENST00000419499 HSP90AB2PQ58FF8 381 aa12.62□□□□□ -0.39
LINC00402-201ENST00000419499 STRCQ7RTU9 1775 aa12.62□□□□□ -0.39
LINC00402-201ENST00000419499 ALDH1L2Q3SY69 923 aa12.62□□□□□ -0.39
LINC00402-201ENST00000419499 SSH1Q8WYL5 1049 aa12.62□□□□□ -0.39
LINC00402-201ENST00000419499 ZNF428Q96B54 188 aa12.62□□□□□ -0.39
LINC00402-201ENST00000419499 ADAMTS7Q9UKP4 1686 aa12.61□□□□□ -0.39
LINC00402-201ENST00000419499 SKAP1Q86WV1 359 aa12.61□□□□□ -0.39
LINC00402-201ENST00000419499 COG6Q9Y2V7 657 aa12.61□□□□□ -0.39
LINC00402-201ENST00000419499 DCCP43146 1447 aa12.61□□□□□ -0.39
LINC00402-201ENST00000419499 IGHDP01880 384 aa12.61□□□□□ -0.39
LINC00402-201ENST00000419499 BCL2L13Q9BXK5 485 aa12.61□□□□□ -0.39
LINC00402-201ENST00000419499 KDM3BQ7LBC6 1761 aa12.61□□□□□ -0.39
LINC00402-201ENST00000419499 TRIM27P14373 513 aa12.6□□□□□ -0.39
LINC00402-201ENST00000419499 MVPQ14764 893 aaKnown RBP12.6□□□□□ -0.39
LINC00402-201ENST00000419499 NGDNQ8NEJ9 315 aaKnown RBP12.6□□□□□ -0.39
LINC00402-201ENST00000419499 BACH2Q9BYV9 841 aa12.6□□□□□ -0.39
LINC00402-201ENST00000419499 LMTK3Q96Q04 1460 aa12.6□□□□□ -0.39
LINC00402-201ENST00000419499 CALD1Q05682 793 aaKnown RBP12.59□□□□□ -0.39
LINC00402-201ENST00000419499 CFAP44Q96MT7 982 aa12.59□□□□□ -0.39
LINC00402-201ENST00000419499 MBIPQ9NS73 344 aa12.59□□□□□ -0.39
LINC00402-201ENST00000419499 SIPA1L3O60292 1781 aaPredicted RBP12.59□□□□□ -0.39
LINC00402-201ENST00000419499 LMOD3Q0VAK6 560 aa12.59□□□□□ -0.39
LINC00402-201ENST00000419499 THUMPD2Q9BTF0 503 aaKnown RBP12.59□□□□□ -0.39
LINC00402-201ENST00000419499 RGS12O14924 1447 aa12.59□□□□□ -0.39
LINC00402-201ENST00000419499 ZKSCAN2Q63HK3 967 aa12.59□□□□□ -0.39
LINC00402-201ENST00000419499 RGPD5Q99666 1765 aa12.59□□□□□ -0.39
LINC00402-201ENST00000419499 NCOA3Q9Y6Q9 1424 aa12.58□□□□□ -0.39
LINC00402-201ENST00000419499 KIF16BQ96L93 1317 aa12.58□□□□□ -0.4
LINC00402-201ENST00000419499 C1orf167Q5SNV9 1468 aa12.58□□□□□ -0.4
LINC00402-201ENST00000419499 COL18A1P39060 1754 aa12.58□□□□□ -0.4
LINC00402-201ENST00000419499 SULT6B1Q6IMI4 303 aa12.58□□□□□ -0.4
LINC00402-201ENST00000419499 FRAT1Q92837 279 aaPredicted RBP12.58□□□□□ -0.4
LINC00402-201ENST00000419499 PHF8Q9UPP1 1060 aa12.58□□□□□ -0.4
LINC00402-201ENST00000419499 GNAI1P63096 354 aa12.58□□□□□ -0.4
LINC00402-201ENST00000419499 ATF7IPQ6VMQ6 1270 aa12.58□□□□□ -0.4
LINC00402-201ENST00000419499 VAMP4O75379 141 aa12.57□□□□□ -0.4
LINC00402-201ENST00000419499 HOXC9P31274 260 aa12.57□□□□□ -0.4
LINC00402-201ENST00000419499 SMC4Q9NTJ3 1288 aa12.57□□□□□ -0.4
LINC00402-201ENST00000419499 PCDHB15Q9Y5E8 787 aa12.57□□□□□ -0.4
LINC00402-201ENST00000419499 FAM83GA6ND36 823 aa12.57□□□□□ -0.4
LINC00402-201ENST00000419499 PDE4AP27815 886 aa12.57□□□□□ -0.4
LINC00402-201ENST00000419499 KIAA0232Q92628 1395 aa12.57□□□□□ -0.4
LINC00402-201ENST00000419499 MSH6P52701 1360 aa12.56□□□□□ -0.4
LINC00402-201ENST00000419499 DZIP1LQ8IYY4 767 aaKnown RBP12.56□□□□□ -0.4
LINC00402-201ENST00000419499 ABCC6O95255 1503 aa12.56□□□□□ -0.4
LINC00402-201ENST00000419499 USP19O94966 1318 aa12.56□□□□□ -0.4
LINC00402-201ENST00000419499 CANXP27824 592 aaKnown RBP12.56□□□□□ -0.4
LINC00402-201ENST00000419499 TSPYL6Q8N831 410 aa12.56□□□□□ -0.4
LINC00402-201ENST00000419499 NEFMP07197 916 aa12.55□□□□□ -0.4
LINC00402-201ENST00000419499 CACNA1FO60840 1977 aa12.55□□□□□ -0.4
LINC00402-201ENST00000419499 MRPL50Q8N5N7 158 aaKnown RBP12.55□□□□□ -0.4
LINC00402-201ENST00000419499 EYA1Q99502 592 aa12.55□□□□□ -0.4
LINC00402-201ENST00000419499 NOB1Q9ULX3 412 aaKnown RBP12.55□□□□□ -0.4
LINC00402-201ENST00000419499 ABCC4O15439 1325 aa12.55□□□□□ -0.4
LINC00402-201ENST00000419499 C8orf34Q49A92 452 aa12.55□□□□□ -0.4
LINC00402-201ENST00000419499 CHL1O00533 1208 aa12.54□□□□□ -0.4
LINC00402-201ENST00000419499 ARHGAP45Q92619 1136 aa12.54□□□□□ -0.4
LINC00402-201ENST00000419499 NLRP6P59044 892 aa12.54□□□□□ -0.4
LINC00402-201ENST00000419499 ABCA3Q99758 1704 aa12.54□□□□□ -0.4
LINC00402-201ENST00000419499 RBM33Q96EV2 1170 aaKnown RBP12.53□□□□□ -0.4
LINC00402-201ENST00000419499 DCTN1Q14203 1278 aa12.53□□□□□ -0.4
LINC00402-201ENST00000419499 C8orf58Q8NAV2 365 aa12.53□□□□□ -0.4
LINC00402-201ENST00000419499 ZBTB40Q9NUA8 1239 aa12.52□□□□□ -0.4
LINC00402-201ENST00000419499 PXDNQ92626 1479 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms