RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 CHMP4BQ9H444 224 aaKnown RBP18.66■□□□□ 0.58
HLA-DPA1-242ENST00000419277 RGPD8O14715 1765 aaPredicted RBP18.65■□□□□ 0.58
HLA-DPA1-242ENST00000419277 ARHGEF10O15013 1369 aa18.65■□□□□ 0.58
HLA-DPA1-242ENST00000419277 PDE4AP27815 886 aa18.65■□□□□ 0.58
HLA-DPA1-242ENST00000419277 FLT4P35916 1363 aa18.64■□□□□ 0.57
HLA-DPA1-242ENST00000419277 ANKLE2Q86XL3 938 aa18.64■□□□□ 0.57
HLA-DPA1-242ENST00000419277 SBNO1A3KN83 1393 aa18.64■□□□□ 0.57
HLA-DPA1-242ENST00000419277 ERICH6Q7L0X2 663 aa18.63■□□□□ 0.57
HLA-DPA1-242ENST00000419277 FTSJ3Q8IY81 847 aaKnown RBP18.63■□□□□ 0.57
HLA-DPA1-242ENST00000419277 FRAT1Q92837 279 aaPredicted RBP18.63■□□□□ 0.57
HLA-DPA1-242ENST00000419277 PEAK1Q9H792 1746 aa18.63■□□□□ 0.57
HLA-DPA1-242ENST00000419277 MVPQ14764 893 aaKnown RBP18.63■□□□□ 0.57
HLA-DPA1-242ENST00000419277 SMC4Q9NTJ3 1288 aa18.63■□□□□ 0.57
HLA-DPA1-242ENST00000419277 NWD1Q149M9 1564 aa18.62■□□□□ 0.57
HLA-DPA1-242ENST00000419277 EXOSC9Q06265 439 aaKnown RBP18.62■□□□□ 0.57
HLA-DPA1-242ENST00000419277 DZIP1LQ8IYY4 767 aaKnown RBP18.62■□□□□ 0.57
HLA-DPA1-242ENST00000419277 DDX19BQ9UMR2 479 aa18.62■□□□□ 0.57
HLA-DPA1-242ENST00000419277 ATF7IPQ6VMQ6 1270 aa18.6■□□□□ 0.57
HLA-DPA1-242ENST00000419277 COG6Q9Y2V7 657 aa18.6■□□□□ 0.57
HLA-DPA1-242ENST00000419277 NCKAP5LQ9HCH0 1330 aa18.6■□□□□ 0.57
HLA-DPA1-242ENST00000419277 PANK1Q8TE04 598 aa18.6■□□□□ 0.57
HLA-DPA1-242ENST00000419277 ARHGAP45Q92619 1136 aa18.6■□□□□ 0.57
HLA-DPA1-242ENST00000419277 IPO9Q96P70 1041 aaKnown RBP18.6■□□□□ 0.57
HLA-DPA1-242ENST00000419277 ADGRL3Q9HAR2 1447 aa18.6■□□□□ 0.57
HLA-DPA1-242ENST00000419277 RTL1A6NKG5 1358 aa18.59■□□□□ 0.57
HLA-DPA1-242ENST00000419277 ZNF853P0CG23 659 aa18.59■□□□□ 0.57
HLA-DPA1-242ENST00000419277 NGDNQ8NEJ9 315 aaKnown RBP18.59■□□□□ 0.57
HLA-DPA1-242ENST00000419277 TSR2Q969E8 191 aaKnown RBP18.59■□□□□ 0.57
HLA-DPA1-242ENST00000419277 KDRP35968 1356 aa18.59■□□□□ 0.57
HLA-DPA1-242ENST00000419277 MARF1Q9Y4F3 1742 aaKnown RBP18.59■□□□□ 0.57
HLA-DPA1-242ENST00000419277 FAM161AQ3B820 660 aa18.58■□□□□ 0.57
HLA-DPA1-242ENST00000419277 CFAP44Q96MT7 982 aa18.58■□□□□ 0.57
HLA-DPA1-242ENST00000419277 RWDD1Q9H446 243 aaPredicted RBP18.58■□□□□ 0.57
HLA-DPA1-242ENST00000419277 PHRF1Q9P1Y6 1649 aaKnown RBP18.58■□□□□ 0.57
HLA-DPA1-242ENST00000419277 RRS1Q15050 365 aaKnown RBP18.57■□□□□ 0.56
HLA-DPA1-242ENST00000419277 SSH1Q8WYL5 1049 aa18.57■□□□□ 0.56
HLA-DPA1-242ENST00000419277 HMOX1P09601 288 aa18.56■□□□□ 0.56
HLA-DPA1-242ENST00000419277 KCNA6P17658 529 aa18.56■□□□□ 0.56
HLA-DPA1-242ENST00000419277 EIF4A2Q14240 407 aaKnown RBP18.56■□□□□ 0.56
HLA-DPA1-242ENST00000419277 PLPPR3Q6T4P5 718 aa18.55■□□□□ 0.56
HLA-DPA1-242ENST00000419277 DDRGK1Q96HY6 314 aa18.55■□□□□ 0.56
HLA-DPA1-242ENST00000419277 ZRANB1Q9UGI0 708 aa18.55■□□□□ 0.56
HLA-DPA1-242ENST00000419277 NOP58Q9Y2X3 529 aaKnown RBP18.55■□□□□ 0.56
HLA-DPA1-242ENST00000419277 MSH5O43196 834 aa18.54■□□□□ 0.56
HLA-DPA1-242ENST00000419277 TRIM27P14373 513 aa18.54■□□□□ 0.56
HLA-DPA1-242ENST00000419277 PHACTR3Q96KR7 559 aa18.54■□□□□ 0.56
HLA-DPA1-242ENST00000419277 NPHP4O75161 1426 aaPredicted RBP18.54■□□□□ 0.56
HLA-DPA1-242ENST00000419277 KIAA0232Q92628 1395 aa18.53■□□□□ 0.56
HLA-DPA1-242ENST00000419277 RLBP1P12271 317 aa18.53■□□□□ 0.56
HLA-DPA1-242ENST00000419277 HDAC1Q13547 482 aaPredicted RBP18.52■□□□□ 0.56
HLA-DPA1-242ENST00000419277 BCL2L13Q9BXK5 485 aa18.52■□□□□ 0.56
HLA-DPA1-242ENST00000419277 KIF1AQ12756 1690 aa18.52■□□□□ 0.56
HLA-DPA1-242ENST00000419277 LRRC37A3O60309 1634 aa18.52■□□□□ 0.55
HLA-DPA1-242ENST00000419277 MAP3K19Q56UN5 1328 aa18.51■□□□□ 0.55
HLA-DPA1-242ENST00000419277 IGSF1Q8N6C5 1336 aa18.51■□□□□ 0.55
HLA-DPA1-242ENST00000419277 FBLN1P23142 703 aa18.5■□□□□ 0.55
HLA-DPA1-242ENST00000419277 HTATSF1O43719 755 aaKnown RBP18.49■□□□□ 0.55
HLA-DPA1-242ENST00000419277 SULT6B1Q6IMI4 303 aa18.49■□□□□ 0.55
HLA-DPA1-242ENST00000419277 LTN1O94822 1766 aa18.49■□□□□ 0.55
HLA-DPA1-242ENST00000419277 IGHDP01880 384 aa18.49■□□□□ 0.55
HLA-DPA1-242ENST00000419277 ZBTB47Q9UFB7 747 aaPredicted RBP18.49■□□□□ 0.55
HLA-DPA1-242ENST00000419277 VAMP4O75379 141 aa18.48■□□□□ 0.55
HLA-DPA1-242ENST00000419277 GAS2L2Q8NHY3 880 aa18.48■□□□□ 0.55
HLA-DPA1-242ENST00000419277 MBIPQ9NS73 344 aa18.48■□□□□ 0.55
HLA-DPA1-242ENST00000419277 NOB1Q9ULX3 412 aaKnown RBP18.48■□□□□ 0.55
HLA-DPA1-242ENST00000419277 SOS1Q07889 1333 aaPredicted RBP18.48■□□□□ 0.55
HLA-DPA1-242ENST00000419277 C8orf34Q49A92 452 aa18.47■□□□□ 0.55
HLA-DPA1-242ENST00000419277 ITPRIPQ8IWB1 547 aa18.47■□□□□ 0.55
HLA-DPA1-242ENST00000419277 API5Q9BZZ5 524 aaKnown RBP18.47■□□□□ 0.55
HLA-DPA1-242ENST00000419277 CACNA1FO60840 1977 aa18.47■□□□□ 0.55
HLA-DPA1-242ENST00000419277 NUTM2FA1L443 756 aa18.46■□□□□ 0.55
HLA-DPA1-242ENST00000419277 AMPHP49418 695 aa18.46■□□□□ 0.55
HLA-DPA1-242ENST00000419277 TWISTNBQ3B726 338 aaPredicted RBP18.46■□□□□ 0.55
HLA-DPA1-242ENST00000419277 PHF8Q9UPP1 1060 aa18.46■□□□□ 0.55
HLA-DPA1-242ENST00000419277 HSP90AB2PQ58FF8 381 aa18.46■□□□□ 0.55
HLA-DPA1-242ENST00000419277 PCDHB15Q9Y5E8 787 aa18.46■□□□□ 0.55
HLA-DPA1-242ENST00000419277 NFAT5O94916 1531 aa18.45■□□□□ 0.54
HLA-DPA1-242ENST00000419277 ABCC4O15439 1325 aa18.45■□□□□ 0.54
HLA-DPA1-242ENST00000419277 NLRP6P59044 892 aa18.45■□□□□ 0.54
HLA-DPA1-242ENST00000419277 ZBTB40Q9NUA8 1239 aa18.45■□□□□ 0.54
HLA-DPA1-242ENST00000419277 NCOA3Q9Y6Q9 1424 aa18.44■□□□□ 0.54
HLA-DPA1-242ENST00000419277 MRPL50Q8N5N7 158 aaKnown RBP18.44■□□□□ 0.54
HLA-DPA1-242ENST00000419277 BABAM1Q9NWV8 329 aa18.44■□□□□ 0.54
HLA-DPA1-242ENST00000419277 MST1RQ04912 1400 aa18.44■□□□□ 0.54
HLA-DPA1-242ENST00000419277 CHL1O00533 1208 aa18.43■□□□□ 0.54
HLA-DPA1-242ENST00000419277 RGS3P49796 1198 aa18.43■□□□□ 0.54
HLA-DPA1-242ENST00000419277 KCNH5Q8NCM2 988 aa18.43■□□□□ 0.54
HLA-DPA1-242ENST00000419277 LAS1LQ9Y4W2 734 aaKnown RBP18.43■□□□□ 0.54
HLA-DPA1-242ENST00000419277 DCCP43146 1447 aa18.42■□□□□ 0.54
HLA-DPA1-242ENST00000419277 SMC5Q8IY18 1101 aa18.42■□□□□ 0.54
HLA-DPA1-242ENST00000419277 TMEM57Q8N5G2 664 aa18.42■□□□□ 0.54
HLA-DPA1-242ENST00000419277 RTF1Q92541 710 aaKnown RBP18.42■□□□□ 0.54
HLA-DPA1-242ENST00000419277 CRB1P82279 1406 aa18.42■□□□□ 0.54
HLA-DPA1-242ENST00000419277 SLIT3O75094 1523 aa18.42■□□□□ 0.54
HLA-DPA1-242ENST00000419277 PTPRCP08575 1304 aa18.41■□□□□ 0.54
HLA-DPA1-242ENST00000419277 AEBP1Q8IUX7 1158 aa18.41■□□□□ 0.54
HLA-DPA1-242ENST00000419277 ABTB2Q8N961 1025 aa18.41■□□□□ 0.54
HLA-DPA1-242ENST00000419277 HOXC9P31274 260 aa18.4■□□□□ 0.54
HLA-DPA1-242ENST00000419277 TNNQ9UQP3 1299 aa18.4■□□□□ 0.54
HLA-DPA1-242ENST00000419277 LMTK3Q96Q04 1460 aa18.39■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms