RNA–Protein interactions for RNA: ENST00000418909.6

SHROOM2-202, Transcript of shroom family member 2, humanhuman

TSL 1 (best) BASIC

Gene SHROOM2, Length 4,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM2-202ENST00000418909 ABCC11Q96J66 1382 aa13.81□□□□□ -0.2
SHROOM2-202ENST00000418909 RNF20Q5VTR2 975 aa13.8□□□□□ -0.2
SHROOM2-202ENST00000418909 YTHDC2Q9H6S0 1430 aaKnown RBP13.8□□□□□ -0.2
SHROOM2-202ENST00000418909 CCDC27Q2M243 656 aa13.8□□□□□ -0.2
SHROOM2-202ENST00000418909 BICDL1Q6ZP65 573 aa13.8□□□□□ -0.2
SHROOM2-202ENST00000418909 PRAG1Q86YV5 1406 aa13.8□□□□□ -0.2
SHROOM2-202ENST00000418909 RAD21O60216 631 aa13.79□□□□□ -0.2
SHROOM2-202ENST00000418909 MARCH6O60337 910 aa13.79□□□□□ -0.2
SHROOM2-202ENST00000418909 HSP90AB3PQ58FF7 597 aa13.79□□□□□ -0.2
SHROOM2-202ENST00000418909 SLAIN2Q9P270 581 aa13.79□□□□□ -0.2
SHROOM2-202ENST00000418909 ZCRB1Q8TBF4 217 aaKnown RBP13.79□□□□□ -0.2
SHROOM2-202ENST00000418909 MCM10Q7L590 875 aa13.79□□□□□ -0.2
SHROOM2-202ENST00000418909 CLSTN1O94985 981 aa13.79□□□□□ -0.2
SHROOM2-202ENST00000418909 PANK1Q8TE04 598 aa13.79□□□□□ -0.2
SHROOM2-202ENST00000418909 MLH3Q9UHC1 1453 aa13.79□□□□□ -0.2
SHROOM2-202ENST00000418909 WASHC4Q2M389 1173 aa13.78□□□□□ -0.2
SHROOM2-202ENST00000418909 AK7Q96M32 723 aa13.78□□□□□ -0.2
SHROOM2-202ENST00000418909 GCP02774 474 aa13.78□□□□□ -0.2
SHROOM2-202ENST00000418909 SMARCC1Q92922 1105 aaPredicted RBP13.78□□□□□ -0.2
SHROOM2-202ENST00000418909 CABLES1Q8TDN4 633 aa13.78□□□□□ -0.2
SHROOM2-202ENST00000418909 CDCA7LQ96GN5 454 aa13.78□□□□□ -0.2
SHROOM2-202ENST00000418909 FYB1O15117 783 aa13.78□□□□□ -0.2
SHROOM2-202ENST00000418909 DUSP27Q5VZP5 1158 aa13.77□□□□□ -0.2
SHROOM2-202ENST00000418909 LARP1Q6PKG0 1096 aaKnown RBP13.77□□□□□ -0.2
SHROOM2-202ENST00000418909 KCNA4P22459 653 aa13.77□□□□□ -0.21
SHROOM2-202ENST00000418909 ANO8Q9HCE9 1232 aaPredicted RBP13.77□□□□□ -0.21
SHROOM2-202ENST00000418909 MYO5CQ9NQX4 1742 aa13.77□□□□□ -0.21
SHROOM2-202ENST00000418909 PDE3AQ14432 1141 aa13.77□□□□□ -0.21
SHROOM2-202ENST00000418909 NRDCO43847 1150 aa13.76□□□□□ -0.21
SHROOM2-202ENST00000418909 CCDC158Q5M9N0 1113 aa13.76□□□□□ -0.21
SHROOM2-202ENST00000418909 IFT57Q9NWB7 429 aa13.76□□□□□ -0.21
SHROOM2-202ENST00000418909 PTMAP06454 111 aaKnown RBP13.76□□□□□ -0.21
SHROOM2-202ENST00000418909 VPS53Q5VIR6 699 aa13.76□□□□□ -0.21
SHROOM2-202ENST00000418909 RASSF8Q8NHQ8 419 aa13.76□□□□□ -0.21
SHROOM2-202ENST00000418909 CWC22Q9HCG8 908 aaKnown RBP13.76□□□□□ -0.21
SHROOM2-202ENST00000418909 RALGAPBQ86X10 1494 aa13.76□□□□□ -0.21
SHROOM2-202ENST00000418909 ERICH2A1L162 156 aa13.76□□□□□ -0.21
SHROOM2-202ENST00000418909 IL2RBP14784 551 aa13.76□□□□□ -0.21
SHROOM2-202ENST00000418909 IGHMBP2P38935 993 aaKnown RBP13.76□□□□□ -0.21
SHROOM2-202ENST00000418909 DISP3Q9P2K9 1392 aa13.76□□□□□ -0.21
SHROOM2-202ENST00000418909 MAST1Q9Y2H9 1570 aa13.75□□□□□ -0.21
SHROOM2-202ENST00000418909 GOLGA6L6A8MZA4 724 aa13.75□□□□□ -0.21
SHROOM2-202ENST00000418909 DHX16O60231 1041 aaKnown RBP13.75□□□□□ -0.21
SHROOM2-202ENST00000418909 HSP90AB2PQ58FF8 381 aa13.75□□□□□ -0.21
SHROOM2-202ENST00000418909 CEP126Q9P2H0 1117 aa13.75□□□□□ -0.21
SHROOM2-202ENST00000418909 CDCA7Q9BWT1 371 aaPredicted RBP13.75□□□□□ -0.21
SHROOM2-202ENST00000418909 LNPKQ9C0E8 428 aa13.75□□□□□ -0.21
SHROOM2-202ENST00000418909 SPRYD3Q8NCJ5 442 aa13.75□□□□□ -0.21
SHROOM2-202ENST00000418909 NOB1Q9ULX3 412 aaKnown RBP13.75□□□□□ -0.21
SHROOM2-202ENST00000418909 NPATQ14207 1427 aa13.74□□□□□ -0.21
SHROOM2-202ENST00000418909 ATF7IPQ6VMQ6 1270 aa13.74□□□□□ -0.21
SHROOM2-202ENST00000418909 TRIM44Q96DX7 344 aaPredicted RBP13.74□□□□□ -0.21
SHROOM2-202ENST00000418909 THUMPD2Q9BTF0 503 aaKnown RBP13.74□□□□□ -0.21
SHROOM2-202ENST00000418909 LTKP29376 864 aa13.74□□□□□ -0.21
SHROOM2-202ENST00000418909 PLCB2Q00722 1185 aa13.74□□□□□ -0.21
SHROOM2-202ENST00000418909 DBF4Q9UBU7 674 aaPredicted RBP13.74□□□□□ -0.21
SHROOM2-202ENST00000418909 C11orf95C9JLR9 678 aaPredicted RBP13.74□□□□□ -0.21
SHROOM2-202ENST00000418909 DCTN1Q14203 1278 aa13.74□□□□□ -0.21
SHROOM2-202ENST00000418909 RALYLQ86SE5 291 aaKnown RBP13.74□□□□□ -0.21
SHROOM2-202ENST00000418909 A0A087WZG4 1122 aa13.73□□□□□ -0.21
SHROOM2-202ENST00000418909 NOL8Q76FK4 1167 aaKnown RBP13.73□□□□□ -0.21
SHROOM2-202ENST00000418909 ORAI2Q96SN7 254 aa13.73□□□□□ -0.21
SHROOM2-202ENST00000418909 MIS18AQ9NYP9 233 aa13.73□□□□□ -0.21
SHROOM2-202ENST00000418909 FLT4P35916 1363 aa13.73□□□□□ -0.21
SHROOM2-202ENST00000418909 ARHGEF5Q12774 1597 aa13.73□□□□□ -0.21
SHROOM2-202ENST00000418909 GBP4Q96PP9 640 aa13.73□□□□□ -0.21
SHROOM2-202ENST00000418909 ANO2Q9NQ90 1003 aa13.73□□□□□ -0.21
SHROOM2-202ENST00000418909 FAM184AQ8NB25 1140 aa13.73□□□□□ -0.21
SHROOM2-202ENST00000418909 FSD1Q9BTV5 496 aa13.73□□□□□ -0.21
SHROOM2-202ENST00000418909 HYPKQ9NX55 129 aa13.73□□□□□ -0.21
SHROOM2-202ENST00000418909 ARHGEF10O15013 1369 aa13.72□□□□□ -0.21
SHROOM2-202ENST00000418909 EIF2AK4Q9P2K8 1649 aaKnown RBP13.72□□□□□ -0.21
SHROOM2-202ENST00000418909 TSPOAP1O95153 1857 aa13.72□□□□□ -0.21
SHROOM2-202ENST00000418909 CPLX1O14810 134 aa13.72□□□□□ -0.21
SHROOM2-202ENST00000418909 MAGI3Q5TCQ9 1506 aa13.72□□□□□ -0.21
SHROOM2-202ENST00000418909 BTG4Q9NY30 223 aa13.72□□□□□ -0.21
SHROOM2-202ENST00000418909 NBPF14Q5TI25 921 aa13.71□□□□□ -0.21
SHROOM2-202ENST00000418909 INTS3Q68E01 1043 aaKnown RBP13.71□□□□□ -0.21
SHROOM2-202ENST00000418909 CNTROBQ8N137 903 aa13.71□□□□□ -0.21
SHROOM2-202ENST00000418909 SIRT1Q96EB6 747 aa13.71□□□□□ -0.21
SHROOM2-202ENST00000418909 MBD5Q9P267 1494 aa13.71□□□□□ -0.21
SHROOM2-202ENST00000418909 ZCCHC11Q5TAX3 1644 aaKnown RBP13.71□□□□□ -0.21
SHROOM2-202ENST00000418909 ABCC1P33527 1531 aa13.71□□□□□ -0.21
SHROOM2-202ENST00000418909 RFC4P35249 363 aa13.71□□□□□ -0.21
SHROOM2-202ENST00000418909 CSPP1Q1MSJ5 1256 aa13.71□□□□□ -0.21
SHROOM2-202ENST00000418909 TTC39AQ5SRH9 613 aa13.71□□□□□ -0.21
SHROOM2-202ENST00000418909 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.71□□□□□ -0.21
SHROOM2-202ENST00000418909 SNRPA1P09661 255 aaKnown RBP13.71□□□□□ -0.22
SHROOM2-202ENST00000418909 PDIA4P13667 645 aaKnown RBP13.71□□□□□ -0.22
SHROOM2-202ENST00000418909 PDE4CQ08493 712 aa13.71□□□□□ -0.22
SHROOM2-202ENST00000418909 SLC3A2P08195 630 aaKnown RBP13.7□□□□□ -0.22
SHROOM2-202ENST00000418909 ARHGEF12Q9NZN5 1544 aa13.7□□□□□ -0.22
SHROOM2-202ENST00000418909 HIP1O00291 1037 aa13.7□□□□□ -0.22
SHROOM2-202ENST00000418909 FAM161AQ3B820 660 aa13.7□□□□□ -0.22
SHROOM2-202ENST00000418909 TCEAL9Q9UHQ7 104 aa13.7□□□□□ -0.22
SHROOM2-202ENST00000418909 SF3A1Q15459 793 aaKnown RBP13.7□□□□□ -0.22
SHROOM2-202ENST00000418909 GCC1Q96CN9 775 aa13.7□□□□□ -0.22
SHROOM2-202ENST00000418909 TRMT112Q9UI30 125 aaKnown RBP13.7□□□□□ -0.22
SHROOM2-202ENST00000418909 PZPP20742 1482 aa13.69□□□□□ -0.22
SHROOM2-202ENST00000418909 SRGAP3O43295 1099 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms