RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 WASF2Q9Y6W5 498 aa9.49□□□□□ -0.89
HMGB1P49-201ENST00000418882 A6NJR5 290 aa9.48□□□□□ -0.89
HMGB1P49-201ENST00000418882 ESPNB1AK53 854 aa9.48□□□□□ -0.89
HMGB1P49-201ENST00000418882 ST8SIA5O15466 376 aa9.48□□□□□ -0.89
HMGB1P49-201ENST00000418882 GIGYF1O75420 1035 aaPredicted RBP9.48□□□□□ -0.89
HMGB1P49-201ENST00000418882 DGAT1O75907 488 aa9.48□□□□□ -0.89
HMGB1P49-201ENST00000418882 MYT1Q01538 1121 aa9.48□□□□□ -0.89
HMGB1P49-201ENST00000418882 PKDCCQ504Y2 493 aa9.48□□□□□ -0.89
HMGB1P49-201ENST00000418882 WASHC4Q2M389 1173 aa9.47□□□□□ -0.89
HMGB1P49-201ENST00000418882 Q6ZNB5 142 aa9.47□□□□□ -0.89
HMGB1P49-201ENST00000418882 RAB15P59190 212 aa9.46□□□□□ -0.9
HMGB1P49-201ENST00000418882 NR5A1Q13285 461 aa9.46□□□□□ -0.9
HMGB1P49-201ENST00000418882 TIMP2P16035 220 aa9.45□□□□□ -0.9
HMGB1P49-201ENST00000418882 ITPKCQ96DU7 683 aa9.45□□□□□ -0.9
HMGB1P49-201ENST00000418882 DACH1Q9UI36 760 aa9.45□□□□□ -0.9
HMGB1P49-201ENST00000418882 CDV3Q9UKY7 258 aaKnown RBP9.45□□□□□ -0.9
HMGB1P49-201ENST00000418882 NBPF20Q3BBV1 942 aa9.44□□□□□ -0.9
HMGB1P49-201ENST00000418882 ALG2Q9H553 416 aa9.44□□□□□ -0.9
HMGB1P49-201ENST00000418882 ZFAND3Q9H8U3 227 aa9.44□□□□□ -0.9
HMGB1P49-201ENST00000418882 AAASQ9NRG9 546 aa9.44□□□□□ -0.9
HMGB1P49-201ENST00000418882 TMPRSS4Q9NRS4 437 aa9.44□□□□□ -0.9
HMGB1P49-201ENST00000418882 CEP126Q9P2H0 1117 aa9.44□□□□□ -0.9
HMGB1P49-201ENST00000418882 ZNF330Q9Y3S2 320 aaPredicted RBP9.44□□□□□ -0.9
HMGB1P49-201ENST00000418882 EIF4G2P78344 907 aaKnown RBP eCLIP9.43□□□□□ -0.9
HMGB1P49-201ENST00000418882 PPP1R26Q5T8A7 1209 aaPredicted RBP9.43□□□□□ -0.9
HMGB1P49-201ENST00000418882 CCDC116Q8IYX3 515 aa9.43□□□□□ -0.9
HMGB1P49-201ENST00000418882 ERVH48-1M5A8F1 160 aa9.42□□□□□ -0.9
HMGB1P49-201ENST00000418882 TRAK2O60296 914 aa9.42□□□□□ -0.9
HMGB1P49-201ENST00000418882 WDR4P57081 412 aaKnown RBP9.42□□□□□ -0.9
HMGB1P49-201ENST00000418882 TSGA10IPQ3SY00 556 aa9.42□□□□□ -0.9
HMGB1P49-201ENST00000418882 CRIPAKQ8N1N5 446 aa9.42□□□□□ -0.9
HMGB1P49-201ENST00000418882 PHTF2Q8N3S3 785 aa9.42□□□□□ -0.9
HMGB1P49-201ENST00000418882 CCDC85AQ96PX6 553 aaPredicted RBP9.42□□□□□ -0.9
HMGB1P49-201ENST00000418882 PIK3CDO00329 1044 aa9.41□□□□□ -0.9
HMGB1P49-201ENST00000418882 ZIC2O95409 532 aaPredicted RBP9.41□□□□□ -0.9
HMGB1P49-201ENST00000418882 SMCPP49901 116 aaPredicted RBP9.41□□□□□ -0.9
HMGB1P49-201ENST00000418882 ZMYND15Q9H091 742 aa9.41□□□□□ -0.9
HMGB1P49-201ENST00000418882 TRAF7Q6Q0C0 670 aa9.4□□□□□ -0.9
HMGB1P49-201ENST00000418882 ZNF784Q8NCA9 323 aaPredicted RBP9.39□□□□□ -0.91
HMGB1P49-201ENST00000418882 UCN2Q96RP3 112 aa9.39□□□□□ -0.91
HMGB1P49-201ENST00000418882 AXIN1O15169 862 aa9.38□□□□□ -0.91
HMGB1P49-201ENST00000418882 CAPN5O15484 640 aaPredicted RBP9.38□□□□□ -0.91
HMGB1P49-201ENST00000418882 LILRA1O75019 489 aa9.38□□□□□ -0.91
HMGB1P49-201ENST00000418882 BMP1P13497 986 aa9.38□□□□□ -0.91
HMGB1P49-201ENST00000418882 SCTRP47872 440 aa9.38□□□□□ -0.91
HMGB1P49-201ENST00000418882 MCCD1P59942 119 aaPredicted RBP9.38□□□□□ -0.91
HMGB1P49-201ENST00000418882 CBLBQ13191 982 aa9.38□□□□□ -0.91
HMGB1P49-201ENST00000418882 SEMA3FQ13275 785 aa9.38□□□□□ -0.91
HMGB1P49-201ENST00000418882 HDGFL1Q5TGJ6 251 aa9.38□□□□□ -0.91
HMGB1P49-201ENST00000418882 C14orf37Q86TY3 774 aa9.38□□□□□ -0.91
HMGB1P49-201ENST00000418882 WWC1Q8IX03 1113 aa9.38□□□□□ -0.91
HMGB1P49-201ENST00000418882 SEPT12Q8IYM1 358 aa9.38□□□□□ -0.91
HMGB1P49-201ENST00000418882 GLMNQ92990 594 aa9.38□□□□□ -0.91
HMGB1P49-201ENST00000418882 CDCA7Q9BWT1 371 aaPredicted RBP9.38□□□□□ -0.91
HMGB1P49-201ENST00000418882 TIMELESSQ9UNS1 1208 aa9.38□□□□□ -0.91
HMGB1P49-201ENST00000418882 SOX11P35716 441 aa9.37□□□□□ -0.91
HMGB1P49-201ENST00000418882 CTC1Q2NKJ3 1217 aa9.37□□□□□ -0.91
HMGB1P49-201ENST00000418882 TRIM46Q7Z4K8 759 aa9.37□□□□□ -0.91
HMGB1P49-201ENST00000418882 ZNF777Q9ULD5 760 aaPredicted RBP9.37□□□□□ -0.91
HMGB1P49-201ENST00000418882 EMILIN1Q9Y6C2 1016 aa9.37□□□□□ -0.91
HMGB1P49-201ENST00000418882 ADD1P35611 737 aaKnown RBP9.36□□□□□ -0.91
HMGB1P49-201ENST00000418882 CYLDQ9NQC7 956 aa9.36□□□□□ -0.91
HMGB1P49-201ENST00000418882 CHIC2Q9UKJ5 165 aa9.36□□□□□ -0.91
HMGB1P49-201ENST00000418882 PCDHB11Q9Y5F2 797 aa9.35□□□□□ -0.91
HMGB1P49-201ENST00000418882 POTECB2RU33 542 aa9.34□□□□□ -0.91
HMGB1P49-201ENST00000418882 DHX9Q08211 1270 aaKnown RBP9.34□□□□□ -0.91
HMGB1P49-201ENST00000418882 RNF135Q8IUD6 432 aa9.34□□□□□ -0.91
HMGB1P49-201ENST00000418882 MEIOBQ8N635 442 aa9.34□□□□□ -0.91
HMGB1P49-201ENST00000418882 KDF1Q8NAX2 398 aaPredicted RBP9.34□□□□□ -0.91
HMGB1P49-201ENST00000418882 ZNF592Q92610 1267 aa9.34□□□□□ -0.91
HMGB1P49-201ENST00000418882 SLFNL1Q499Z3 407 aa9.33□□□□□ -0.92
HMGB1P49-201ENST00000418882 Q6ZVU0 165 aa9.33□□□□□ -0.92
HMGB1P49-201ENST00000418882 ATP13A2Q9NQ11 1180 aa9.33□□□□□ -0.92
HMGB1P49-201ENST00000418882 PGPEP1Q9NXJ5 209 aa9.33□□□□□ -0.92
HMGB1P49-201ENST00000418882 ERVK-9P63128 1117 aa9.32□□□□□ -0.92
HMGB1P49-201ENST00000418882 RNF20Q5VTR2 975 aa9.32□□□□□ -0.92
HMGB1P49-201ENST00000418882 TBC1D9Q6ZT07 1266 aa9.32□□□□□ -0.92
HMGB1P49-201ENST00000418882 AGBL1Q96MI9 1066 aa9.32□□□□□ -0.92
HMGB1P49-201ENST00000418882 ARID3CA6NKF2 412 aa9.31□□□□□ -0.92
HMGB1P49-201ENST00000418882 PLPP7Q8NBV4 271 aa9.31□□□□□ -0.92
HMGB1P49-201ENST00000418882 MRPL14Q6P1L8 145 aaKnown RBP9.3□□□□□ -0.92
HMGB1P49-201ENST00000418882 OSBPL3Q9H4L5 887 aa9.3□□□□□ -0.92
HMGB1P49-201ENST00000418882 C1orf115Q9H7X2 142 aa9.3□□□□□ -0.92
HMGB1P49-201ENST00000418882 GMPR2Q9P2T1 348 aaKnown RBP9.3□□□□□ -0.92
HMGB1P49-201ENST00000418882 DOLKQ9UPQ8 538 aa9.3□□□□□ -0.92
HMGB1P49-201ENST00000418882 OXLD1Q5BKU9 147 aa9.29□□□□□ -0.92
HMGB1P49-201ENST00000418882 DEPDC4Q8N2C3 294 aa9.29□□□□□ -0.92
HMGB1P49-201ENST00000418882 CALR3Q96L12 384 aaKnown RBP9.29□□□□□ -0.92
HMGB1P49-201ENST00000418882 STAU1O95793 577 aaKnown RBP9.28□□□□□ -0.92
HMGB1P49-201ENST00000418882 SKIP12755 728 aa9.28□□□□□ -0.92
HMGB1P49-201ENST00000418882 CC2D2BQ6DHV5 1058 aa9.28□□□□□ -0.92
HMGB1P49-201ENST00000418882 LINC00528Q8N1L1 170 aa9.28□□□□□ -0.92
HMGB1P49-201ENST00000418882 ZFP42Q96MM3 310 aa9.28□□□□□ -0.92
HMGB1P49-201ENST00000418882 PURBQ96QR8 312 aaKnown RBP9.28□□□□□ -0.92
HMGB1P49-201ENST00000418882 ADH1AP07327 375 aa9.27□□□□□ -0.93
HMGB1P49-201ENST00000418882 RELBQ01201 579 aa9.27□□□□□ -0.93
HMGB1P49-201ENST00000418882 C6orf118Q5T5N4 469 aa9.27□□□□□ -0.93
HMGB1P49-201ENST00000418882 USP17L5A8MUK1 530 aa9.26□□□□□ -0.93
HMGB1P49-201ENST00000418882 NFATC2IPQ8NCF5 419 aa9.26□□□□□ -0.93
HMGB1P49-201ENST00000418882 ATP9BO43861 1147 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms