RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 RIMBP3CA6NJZ7 1639 aa14.22□□□□□ -0.13
DDR1-232ENST00000418800 RIMBP3BA6NNM3 1639 aa14.22□□□□□ -0.13
DDR1-232ENST00000418800 RIMBP3Q9UFD9 1639 aa14.22□□□□□ -0.13
DDR1-232ENST00000418800 RBM25P49756 843 aaKnown RBP14.22□□□□□ -0.13
DDR1-232ENST00000418800 ZNF428Q96B54 188 aa14.22□□□□□ -0.13
DDR1-232ENST00000418800 TSPY26PQ9H489 355 aa14.22□□□□□ -0.13
DDR1-232ENST00000418800 ZBTB22O15209 634 aa14.22□□□□□ -0.13
DDR1-232ENST00000418800 FBXO31Q5XUX0 539 aaPredicted RBP14.22□□□□□ -0.13
DDR1-232ENST00000418800 GCC1Q96CN9 775 aa14.22□□□□□ -0.13
DDR1-232ENST00000418800 CHMP4AQ9BY43 222 aa14.22□□□□□ -0.13
DDR1-232ENST00000418800 U2AF2P26368 475 aaKnown RBP eCLIP14.21□□□□□ -0.13
DDR1-232ENST00000418800 HDGFL2Q7Z4V5 671 aaPredicted RBP14.21□□□□□ -0.13
DDR1-232ENST00000418800 CDC42BPAQ5VT25 1732 aa14.21□□□□□ -0.13
DDR1-232ENST00000418800 ADGRL2O95490 1459 aa14.21□□□□□ -0.13
DDR1-232ENST00000418800 MAP4K4O95819 1239 aaPredicted RBP14.21□□□□□ -0.13
DDR1-232ENST00000418800 SYAP1Q96A49 352 aaPredicted RBP14.21□□□□□ -0.14
DDR1-232ENST00000418800 TERF2IPQ9NYB0 399 aa14.21□□□□□ -0.14
DDR1-232ENST00000418800 MIS18AQ9NYP9 233 aa14.21□□□□□ -0.14
DDR1-232ENST00000418800 TMEM63CQ9P1W3 806 aa14.21□□□□□ -0.14
DDR1-232ENST00000418800 KRT24Q2M2I5 525 aa14.2□□□□□ -0.14
DDR1-232ENST00000418800 FIBPO43427 364 aa14.2□□□□□ -0.14
DDR1-232ENST00000418800 DDX54Q8TDD1 881 aaKnown RBP14.2□□□□□ -0.14
DDR1-232ENST00000418800 TRIM35Q9UPQ4 493 aa14.2□□□□□ -0.14
DDR1-232ENST00000418800 NSFL1CQ9UNZ2 370 aaKnown RBP14.19□□□□□ -0.14
DDR1-232ENST00000418800 TTC37Q6PGP7 1564 aa14.19□□□□□ -0.14
DDR1-232ENST00000418800 REC8O95072 547 aa14.19□□□□□ -0.14
DDR1-232ENST00000418800 EXOC6BQ9Y2D4 811 aa14.19□□□□□ -0.14
DDR1-232ENST00000418800 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.19□□□□□ -0.14
DDR1-232ENST00000418800 ITSN2Q9NZM3 1697 aa14.19□□□□□ -0.14
DDR1-232ENST00000418800 MCCP23508 829 aa14.18□□□□□ -0.14
DDR1-232ENST00000418800 HMGN5P82970 282 aaKnown RBP14.18□□□□□ -0.14
DDR1-232ENST00000418800 LMBRD1Q9NUN5 540 aa14.18□□□□□ -0.14
DDR1-232ENST00000418800 NOLC1Q14978 699 aaKnown RBP eCLIP14.18□□□□□ -0.14
DDR1-232ENST00000418800 CABP1Q9NZU7 370 aa14.18□□□□□ -0.14
DDR1-232ENST00000418800 KDM5DQ9BY66 1539 aa14.18□□□□□ -0.14
DDR1-232ENST00000418800 POLR3AO14802 1390 aaPredicted RBP14.18□□□□□ -0.14
DDR1-232ENST00000418800 DMTNQ08495 405 aa14.17□□□□□ -0.14
DDR1-232ENST00000418800 LRSAM1Q6UWE0 723 aa14.17□□□□□ -0.14
DDR1-232ENST00000418800 PHACTR3Q96KR7 559 aa14.17□□□□□ -0.14
DDR1-232ENST00000418800 ZNF500O60304 480 aaPredicted RBP14.17□□□□□ -0.14
DDR1-232ENST00000418800 GPT2Q8TD30 523 aa14.17□□□□□ -0.14
DDR1-232ENST00000418800 NAP1L2Q9ULW6 460 aaPredicted RBP14.17□□□□□ -0.14
DDR1-232ENST00000418800 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.17□□□□□ -0.146e-7■■■■□ 21.9
DDR1-232ENST00000418800 SDSP20132 328 aa14.17□□□□□ -0.14
DDR1-232ENST00000418800 IFT57Q9NWB7 429 aa14.17□□□□□ -0.14
DDR1-232ENST00000418800 HCLS1P14317 486 aaPredicted RBP14.16□□□□□ -0.14
DDR1-232ENST00000418800 KCNJ4P48050 445 aa14.16□□□□□ -0.14
DDR1-232ENST00000418800 RBM33Q96EV2 1170 aaKnown RBP14.16□□□□□ -0.14
DDR1-232ENST00000418800 ATP2B3Q16720 1220 aa14.16□□□□□ -0.14
DDR1-232ENST00000418800 AK9Q5TCS8 1911 aa14.16□□□□□ -0.14
DDR1-232ENST00000418800 F6X3S4 739 aa14.16□□□□□ -0.14
DDR1-232ENST00000418800 ZBTB7BO15156 539 aaPredicted RBP14.16□□□□□ -0.14
DDR1-232ENST00000418800 RRS1Q15050 365 aaKnown RBP14.16□□□□□ -0.14
DDR1-232ENST00000418800 ADCY5O95622 1261 aa14.15□□□□□ -0.14
DDR1-232ENST00000418800 C8orf58Q8NAV2 365 aa14.15□□□□□ -0.14
DDR1-232ENST00000418800 KIF2CQ99661 725 aa14.15□□□□□ -0.14
DDR1-232ENST00000418800 API5Q9BZZ5 524 aaKnown RBP14.15□□□□□ -0.14
DDR1-232ENST00000418800 ZNF445P59923 1031 aa14.15□□□□□ -0.14
DDR1-232ENST00000418800 AEBP1Q8IUX7 1158 aa14.15□□□□□ -0.14
DDR1-232ENST00000418800 CDC42BPBQ9Y5S2 1711 aa14.15□□□□□ -0.15
DDR1-232ENST00000418800 GOLGA6L4A6NEF3 574 aa14.14□□□□□ -0.15
DDR1-232ENST00000418800 GSPT1P15170 499 aaKnown RBP14.14□□□□□ -0.15
DDR1-232ENST00000418800 PLEKHM2Q8IWE5 1019 aa14.14□□□□□ -0.15
DDR1-232ENST00000418800 PRAM1Q96QH2 718 aa14.14□□□□□ -0.15
DDR1-232ENST00000418800 ESF1Q9H501 851 aaKnown RBP14.14□□□□□ -0.15
DDR1-232ENST00000418800 VPS37CA5D8V6 355 aaPredicted RBP14.14□□□□□ -0.15
DDR1-232ENST00000418800 OS9Q13438 667 aaPredicted RBP14.14□□□□□ -0.15
DDR1-232ENST00000418800 EMILIN1Q9Y6C2 1016 aa14.14□□□□□ -0.15
DDR1-232ENST00000418800 NLRP1Q9C000 1473 aa14.14□□□□□ -0.15
DDR1-232ENST00000418800 ZSCAN20P17040 1043 aaPredicted RBP14.14□□□□□ -0.15
DDR1-232ENST00000418800 GNAI1P63096 354 aa14.14□□□□□ -0.15
DDR1-232ENST00000418800 FBXW7Q969H0 707 aa14.14□□□□□ -0.15
DDR1-232ENST00000418800 PREX2Q70Z35 1606 aa14.14□□□□□ -0.15
DDR1-232ENST00000418800 MBD3O95983 291 aa14.13□□□□□ -0.15
DDR1-232ENST00000418800 TERF1P54274 439 aa14.13□□□□□ -0.15
DDR1-232ENST00000418800 MYRIPQ8NFW9 859 aa14.13□□□□□ -0.15
DDR1-232ENST00000418800 C16orf45Q96MC5 204 aaPredicted RBP14.13□□□□□ -0.15
DDR1-232ENST00000418800 IL1RAPL2Q9NP60 686 aa14.13□□□□□ -0.15
DDR1-232ENST00000418800 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.13□□□□□ -0.15
DDR1-232ENST00000418800 V9GYY5 206 aaPredicted RBP14.13□□□□□ -0.15
DDR1-232ENST00000418800 PHF14O94880 888 aa14.13□□□□□ -0.15
DDR1-232ENST00000418800 TMX3Q96JJ7 454 aa14.13□□□□□ -0.15
DDR1-232ENST00000418800 BCL2L12Q9HB09 334 aa14.13□□□□□ -0.15
DDR1-232ENST00000418800 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.13□□□□□ -0.15
DDR1-232ENST00000418800 ERC2O15083 957 aa14.12□□□□□ -0.15
DDR1-232ENST00000418800 CT47B1P0C2W7 299 aaPredicted RBP14.12□□□□□ -0.15
DDR1-232ENST00000418800 TNNT3P45378 269 aaPredicted RBP14.12□□□□□ -0.15
DDR1-232ENST00000418800 HS1BP3Q53T59 392 aa14.12□□□□□ -0.15
DDR1-232ENST00000418800 MBIPQ9NS73 344 aa14.12□□□□□ -0.15
DDR1-232ENST00000418800 ASXL2Q76L83 1435 aa14.12□□□□□ -0.15
DDR1-232ENST00000418800 SLC4A2P04920 1241 aa14.12□□□□□ -0.15
DDR1-232ENST00000418800 USP26Q9BXU7 913 aa14.12□□□□□ -0.15
DDR1-232ENST00000418800 DIAPH3Q9NSV4 1193 aa14.12□□□□□ -0.15
DDR1-232ENST00000418800 GADD45BO75293 160 aaPredicted RBP14.12□□□□□ -0.15
DDR1-232ENST00000418800 CEBPAP49715 358 aaPredicted RBP14.12□□□□□ -0.15
DDR1-232ENST00000418800 TTC22Q5TAA0 569 aa14.12□□□□□ -0.15
DDR1-232ENST00000418800 MCM10Q7L590 875 aa14.12□□□□□ -0.15
DDR1-232ENST00000418800 SIRT2Q8IXJ6 389 aa14.12□□□□□ -0.15
DDR1-232ENST00000418800 VAMP4O75379 141 aa14.11□□□□□ -0.15
DDR1-232ENST00000418800 CWC22Q9HCG8 908 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms