RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 ZBTB47Q9UFB7 747 aaPredicted RBP14.68□□□□□ -0.06
RFC1-203ENST00000418436 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.68□□□□□ -0.06
RFC1-203ENST00000418436 A0A1W2PP64 1363 aa14.68□□□□□ -0.06
RFC1-203ENST00000418436 USP54Q70EL1 1684 aa14.68□□□□□ -0.06
RFC1-203ENST00000418436 SLIT2O94813 1529 aa14.67□□□□□ -0.06
RFC1-203ENST00000418436 NWD2Q9ULI1 1742 aa14.67□□□□□ -0.06
RFC1-203ENST00000418436 NUTM2GQ5VZR2 741 aa14.67□□□□□ -0.06
RFC1-203ENST00000418436 NLRP13Q86W25 1043 aa14.67□□□□□ -0.06
RFC1-203ENST00000418436 BCL9LQ86UU0 1499 aa14.67□□□□□ -0.06
RFC1-203ENST00000418436 PLCH1Q4KWH8 1693 aa14.67□□□□□ -0.06
RFC1-203ENST00000418436 EDC4Q6P2E9 1401 aaKnown RBP14.66□□□□□ -0.06
RFC1-203ENST00000418436 COL14A1Q05707 1796 aaKnown RBP14.66□□□□□ -0.06
RFC1-203ENST00000418436 SLIT3O75094 1523 aa14.66□□□□□ -0.06
RFC1-203ENST00000418436 ANKRD36BQ8N2N9 1353 aa14.65□□□□□ -0.06
RFC1-203ENST00000418436 FAM83GA6ND36 823 aa14.65□□□□□ -0.06
RFC1-203ENST00000418436 USP21Q9UK80 565 aa14.65□□□□□ -0.06
RFC1-203ENST00000418436 USP31Q70CQ4 1352 aa14.64□□□□□ -0.07
RFC1-203ENST00000418436 NLRP6P59044 892 aa14.64□□□□□ -0.07
RFC1-203ENST00000418436 NRAPQ86VF7 1730 aa14.63□□□□□ -0.07
RFC1-203ENST00000418436 GCP02774 474 aa14.63□□□□□ -0.07
RFC1-203ENST00000418436 QTRT2Q9H974 415 aaKnown RBP14.63□□□□□ -0.07
RFC1-203ENST00000418436 ATRNO75882 1429 aa14.63□□□□□ -0.07
RFC1-203ENST00000418436 CPDO75976 1380 aa14.62□□□□□ -0.07
RFC1-203ENST00000418436 KIAA0232Q92628 1395 aa14.62□□□□□ -0.07
RFC1-203ENST00000418436 C11orf95C9JLR9 678 aaPredicted RBP14.62□□□□□ -0.07
RFC1-203ENST00000418436 VASPP50552 380 aaPredicted RBP14.62□□□□□ -0.07
RFC1-203ENST00000418436 UNC5CLQ8IV45 518 aa14.62□□□□□ -0.07
RFC1-203ENST00000418436 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.62□□□□□ -0.077e-6■■□□□ 11.5
RFC1-203ENST00000418436 TRPC5Q9UL62 973 aaPredicted RBP14.62□□□□□ -0.07
RFC1-203ENST00000418436 NME9Q86XW9 330 aa14.61□□□□□ -0.07
RFC1-203ENST00000418436 LMO7Q8WWI1 1683 aa14.61□□□□□ -0.07
RFC1-203ENST00000418436 RXRBP28702 533 aa14.6□□□□□ -0.07
RFC1-203ENST00000418436 ZC3H6P61129 1189 aaKnown RBP14.6□□□□□ -0.07
RFC1-203ENST00000418436 RBM6P78332 1123 aaKnown RBP14.6□□□□□ -0.07
RFC1-203ENST00000418436 PRDM11Q9NQV5 511 aa14.6□□□□□ -0.07
RFC1-203ENST00000418436 CDK12Q9NYV4 1490 aaPredicted RBP14.6□□□□□ -0.07
RFC1-203ENST00000418436 OVOS2A0A0J9YW53 1432 aa14.59□□□□□ -0.07
RFC1-203ENST00000418436 OVOS2Q6IE36 1432 aa14.59□□□□□ -0.07
RFC1-203ENST00000418436 PHF12Q96QT6 1004 aa14.59□□□□□ -0.07
RFC1-203ENST00000418436 NFAT5O94916 1531 aa14.59□□□□□ -0.07
RFC1-203ENST00000418436 COL18A1P39060 1754 aa14.59□□□□□ -0.07
RFC1-203ENST00000418436 KIF20BQ96Q89 1820 aa14.58□□□□□ -0.08
RFC1-203ENST00000418436 RASEFQ8IZ41 740 aa14.58□□□□□ -0.08
RFC1-203ENST00000418436 KCNH5Q8NCM2 988 aa14.58□□□□□ -0.08
RFC1-203ENST00000418436 CARD14Q9BXL6 1004 aa14.58□□□□□ -0.08
RFC1-203ENST00000418436 TSPYL2Q9H2G4 693 aaPredicted RBP14.58□□□□□ -0.08
RFC1-203ENST00000418436 BTG4Q9NY30 223 aa14.58□□□□□ -0.08
RFC1-203ENST00000418436 GLI3P10071 1580 aa14.57□□□□□ -0.08
RFC1-203ENST00000418436 CHRNA2Q15822 529 aa14.57□□□□□ -0.08
RFC1-203ENST00000418436 VPS72Q15906 364 aa14.57□□□□□ -0.08
RFC1-203ENST00000418436 CAMTA1Q9Y6Y1 1673 aa14.57□□□□□ -0.08
RFC1-203ENST00000418436 ARHGEF25Q86VW2 580 aa14.56□□□□□ -0.08
RFC1-203ENST00000418436 GJD4Q96KN9 370 aaPredicted RBP14.56□□□□□ -0.08
RFC1-203ENST00000418436 AATKQ6ZMQ8 1374 aa14.56□□□□□ -0.08
RFC1-203ENST00000418436 FYB1O15117 783 aa14.55□□□□□ -0.08
RFC1-203ENST00000418436 NUBP1P53384 320 aa14.55□□□□□ -0.08
RFC1-203ENST00000418436 POLR3GLQ9BT43 218 aa14.55□□□□□ -0.08
RFC1-203ENST00000418436 KIF7Q2M1P5 1343 aa14.55□□□□□ -0.08
RFC1-203ENST00000418436 LTN1O94822 1766 aa14.55□□□□□ -0.08
RFC1-203ENST00000418436 RGPD5Q99666 1765 aa14.55□□□□□ -0.08
RFC1-203ENST00000418436 NSD3Q9BZ95 1437 aa14.54□□□□□ -0.08
RFC1-203ENST00000418436 ABCC6O95255 1503 aa14.54□□□□□ -0.08
RFC1-203ENST00000418436 RGS12O14924 1447 aa14.53□□□□□ -0.08
RFC1-203ENST00000418436 COG3Q96JB2 828 aa14.53□□□□□ -0.08
RFC1-203ENST00000418436 COL5A2P05997 1499 aaPredicted RBP14.52□□□□□ -0.08
RFC1-203ENST00000418436 SOCS7O14512 581 aa14.52□□□□□ -0.09
RFC1-203ENST00000418436 ONECUT3O60422 494 aaPredicted RBP14.52□□□□□ -0.09
RFC1-203ENST00000418436 PANK3Q9H999 370 aa14.52□□□□□ -0.09
RFC1-203ENST00000418436 CCDC7Q96M83 1385 aa14.51□□□□□ -0.09
RFC1-203ENST00000418436 SPATA31A5Q5VU36 1347 aa14.51□□□□□ -0.09
RFC1-203ENST00000418436 SPATA31A7Q8IWB4 1347 aa14.51□□□□□ -0.09
RFC1-203ENST00000418436 SOX12O15370 315 aa14.51□□□□□ -0.09
RFC1-203ENST00000418436 GALR2O43603 387 aaPredicted RBP14.51□□□□□ -0.09
RFC1-203ENST00000418436 GGNBP2Q9H3C7 697 aa14.51□□□□□ -0.09
RFC1-203ENST00000418436 AXIN2Q9Y2T1 843 aa14.51□□□□□ -0.09
RFC1-203ENST00000418436 ANKRD26Q9UPS8 1709 aa14.5□□□□□ -0.09
RFC1-203ENST00000418436 WASHC2AQ641Q2 1341 aa14.5□□□□□ -0.09
RFC1-203ENST00000418436 CGNL1Q0VF96 1302 aa14.49□□□□□ -0.09
RFC1-203ENST00000418436 SPATA31A1Q5TZJ5 1347 aa14.49□□□□□ -0.09
RFC1-203ENST00000418436 ZBTB7CA1YPR0 619 aa14.49□□□□□ -0.09
RFC1-203ENST00000418436 EVA1CP58658 441 aa14.49□□□□□ -0.09
RFC1-203ENST00000418436 STRN4Q9NRL3 753 aa14.49□□□□□ -0.09
RFC1-203ENST00000418436 CCDC9Q9Y3X0 531 aaKnown RBP14.49□□□□□ -0.09
RFC1-203ENST00000418436 BRWD3Q6RI45 1802 aa14.48□□□□□ -0.09
RFC1-203ENST00000418436 LARP1Q6PKG0 1096 aaKnown RBP14.48□□□□□ -0.09
RFC1-203ENST00000418436 THSD7AQ9UPZ6 1657 aa14.47□□□□□ -0.09
RFC1-203ENST00000418436 ZEB1P37275 1124 aaPredicted RBP14.47□□□□□ -0.09
RFC1-203ENST00000418436 FBLN1P23142 703 aa14.46□□□□□ -0.09
RFC1-203ENST00000418436 CRB1P82279 1406 aa14.46□□□□□ -0.09
RFC1-203ENST00000418436 MAP3K19Q56UN5 1328 aa14.45□□□□□ -0.1
RFC1-203ENST00000418436 WDR17Q8IZU2 1322 aa14.45□□□□□ -0.1
RFC1-203ENST00000418436 PER1O15534 1290 aaPredicted RBP14.45□□□□□ -0.1
RFC1-203ENST00000418436 POTEIP0CG38 1075 aa14.45□□□□□ -0.1
RFC1-203ENST00000418436 BLMP54132 1417 aaPredicted RBP14.45□□□□□ -0.1
RFC1-203ENST00000418436 FAM98CQ17RN3 349 aaKnown RBP14.45□□□□□ -0.1
RFC1-203ENST00000418436 BARGINQ6ZT62 677 aa14.45□□□□□ -0.1
RFC1-203ENST00000418436 SEPT12Q8IYM1 358 aa14.45□□□□□ -0.1
RFC1-203ENST00000418436 IP6K1Q92551 441 aa14.45□□□□□ -0.1
RFC1-203ENST00000418436 MAP2P11137 1827 aaKnown RBP14.45□□□□□ -0.1
RFC1-203ENST00000418436 NSD2O96028 1365 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms