RNA–Protein interactions for RNA: ENST00000415138.1

LINC01888-201, Transcript of long intergenic non-protein coding RNA 1888, humanhuman

TSL 2

Gene LINC01888, Length 436 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01888-201ENST00000415138 FAM135BQ49AJ0 1406 aa13.08□□□□□ -0.32
LINC01888-201ENST00000415138 CADPS2Q86UW7 1296 aa13.08□□□□□ -0.32
LINC01888-201ENST00000415138 HS3ST6Q96QI5 342 aa13.08□□□□□ -0.32
LINC01888-201ENST00000415138 RALGAPBQ86X10 1494 aa13.08□□□□□ -0.32
LINC01888-201ENST00000415138 PPP1R37O75864 691 aa13.07□□□□□ -0.32
LINC01888-201ENST00000415138 ZSWIM6Q9HCJ5 1215 aa13.07□□□□□ -0.32
LINC01888-201ENST00000415138 NALCNQ8IZF0 1738 aa13.06□□□□□ -0.32
LINC01888-201ENST00000415138 ILDR2Q71H61 639 aa13.06□□□□□ -0.32
LINC01888-201ENST00000415138 CENPJQ9HC77 1338 aaPredicted RBP13.06□□□□□ -0.32
LINC01888-201ENST00000415138 PIP4K2BP78356 416 aa13.05□□□□□ -0.32
LINC01888-201ENST00000415138 MINK1Q8N4C8 1332 aaPredicted RBP13.05□□□□□ -0.32
LINC01888-201ENST00000415138 QRICH2Q9H0J4 1663 aa13.05□□□□□ -0.32
LINC01888-201ENST00000415138 ADGRL3Q9HAR2 1447 aa13.05□□□□□ -0.32
LINC01888-201ENST00000415138 C2orf72A6NCS6 295 aa13.04□□□□□ -0.32
LINC01888-201ENST00000415138 PDIA4P13667 645 aaKnown RBP13.04□□□□□ -0.32
LINC01888-201ENST00000415138 TMC2Q8TDI7 906 aa13.04□□□□□ -0.32
LINC01888-201ENST00000415138 ERBB3P21860 1342 aa13.04□□□□□ -0.32
LINC01888-201ENST00000415138 GPRASP1Q5JY77 1395 aa13.03□□□□□ -0.32
LINC01888-201ENST00000415138 PLEKHH1Q9ULM0 1364 aa13.03□□□□□ -0.32
LINC01888-201ENST00000415138 HIRIP3Q9BW71 556 aaPredicted RBP13.02□□□□□ -0.33
LINC01888-201ENST00000415138 SLAIN2Q9P270 581 aa13.02□□□□□ -0.33
LINC01888-201ENST00000415138 DCCP43146 1447 aa13.02□□□□□ -0.33
LINC01888-201ENST00000415138 POTEB3A0JP26 581 aa13.01□□□□□ -0.33
LINC01888-201ENST00000415138 KIF3CO14782 793 aa13.01□□□□□ -0.33
LINC01888-201ENST00000415138 POTEBQ6S5H4 581 aa13.01□□□□□ -0.33
LINC01888-201ENST00000415138 SUPT16HQ9Y5B9 1047 aaKnown RBP13.01□□□□□ -0.33
LINC01888-201ENST00000415138 EVC2Q86UK5 1308 aa13□□□□□ -0.33
LINC01888-201ENST00000415138 NUTM2FA1L443 756 aa13□□□□□ -0.33
LINC01888-201ENST00000415138 EIF4G2P78344 907 aaKnown RBP eCLIP13□□□□□ -0.33
LINC01888-201ENST00000415138 SRPK2P78362 688 aaKnown RBP13□□□□□ -0.33
LINC01888-201ENST00000415138 RGPD8O14715 1765 aaPredicted RBP12.99□□□□□ -0.33
LINC01888-201ENST00000415138 FMN2Q9NZ56 1722 aa12.99□□□□□ -0.33
LINC01888-201ENST00000415138 CDC42BPGQ6DT37 1551 aa12.99□□□□□ -0.33
LINC01888-201ENST00000415138 WASLO00401 505 aaPredicted RBP12.99□□□□□ -0.33
LINC01888-201ENST00000415138 SOCS7O14512 581 aa12.99□□□□□ -0.33
LINC01888-201ENST00000415138 PDE4CQ08493 712 aa12.99□□□□□ -0.33
LINC01888-201ENST00000415138 GPR153Q6NV75 609 aa12.99□□□□□ -0.33
LINC01888-201ENST00000415138 USP47Q96K76 1375 aa12.98□□□□□ -0.33
LINC01888-201ENST00000415138 ST20-MTHFSA0A0A6YYL1 179 aa12.98□□□□□ -0.33
LINC01888-201ENST00000415138 DEKP35659 375 aaKnown RBP12.98□□□□□ -0.33
LINC01888-201ENST00000415138 ESCO1Q5FWF5 840 aa12.98□□□□□ -0.33
LINC01888-201ENST00000415138 CDK19Q9BWU1 502 aa12.98□□□□□ -0.33
LINC01888-201ENST00000415138 RYDENQ9NUL5 291 aaKnown RBP12.98□□□□□ -0.33
LINC01888-201ENST00000415138 ITSN1Q15811 1721 aa12.97□□□□□ -0.33
LINC01888-201ENST00000415138 ARSIQ5FYB1 569 aa12.97□□□□□ -0.33
LINC01888-201ENST00000415138 ADGRB2O60241 1585 aa12.97□□□□□ -0.33
LINC01888-201ENST00000415138 ROBO1Q9Y6N7 1651 aa12.96□□□□□ -0.33
LINC01888-201ENST00000415138 FANCIQ9NVI1 1328 aa12.96□□□□□ -0.33
LINC01888-201ENST00000415138 TMF1P82094 1093 aa12.96□□□□□ -0.33
LINC01888-201ENST00000415138 NKX1-1Q15270 411 aaPredicted RBP12.95□□□□□ -0.34
LINC01888-201ENST00000415138 CDCA8Q53HL2 280 aa12.95□□□□□ -0.34
LINC01888-201ENST00000415138 MST1RQ04912 1400 aa12.95□□□□□ -0.34
LINC01888-201ENST00000415138 C1orf167Q5SNV9 1468 aa12.94□□□□□ -0.34
LINC01888-201ENST00000415138 VARS2Q5ST30 1063 aaKnown RBP12.94□□□□□ -0.34
LINC01888-201ENST00000415138 NUDT16Q96DE0 195 aaKnown RBP12.94□□□□□ -0.34
LINC01888-201ENST00000415138 PHLPP1O60346 1717 aa12.93□□□□□ -0.34
LINC01888-201ENST00000415138 SBNO2Q9Y2G9 1366 aa12.93□□□□□ -0.34
LINC01888-201ENST00000415138 TULP4Q9NRJ4 1543 aa12.93□□□□□ -0.34
LINC01888-201ENST00000415138 KIF1AQ12756 1690 aa12.93□□□□□ -0.34
LINC01888-201ENST00000415138 HSPA5P11021 654 aaKnown RBP12.92□□□□□ -0.34
LINC01888-201ENST00000415138 ANKARQ7Z5J8 1434 aa12.92□□□□□ -0.34
LINC01888-201ENST00000415138 NGDNQ8NEJ9 315 aaKnown RBP12.92□□□□□ -0.34
LINC01888-201ENST00000415138 ORAI2Q96SN7 254 aa12.92□□□□□ -0.34
LINC01888-201ENST00000415138 PSME1Q06323 249 aa12.91□□□□□ -0.34
LINC01888-201ENST00000415138 BRINP3Q76B58 766 aa12.91□□□□□ -0.34
LINC01888-201ENST00000415138 SPNS2Q8IVW8 549 aa12.91□□□□□ -0.34
LINC01888-201ENST00000415138 POLR3GLQ9BT43 218 aa12.91□□□□□ -0.34
LINC01888-201ENST00000415138 PMFBP1Q8TBY8 1022 aa12.9□□□□□ -0.34
LINC01888-201ENST00000415138 TMC1Q8TDI8 760 aa12.9□□□□□ -0.34
LINC01888-201ENST00000415138 KHSRPQ92945 711 aaKnown RBP eCLIP12.9□□□□□ -0.34
LINC01888-201ENST00000415138 KRTAP3-3Q9BYR6 98 aa12.9□□□□□ -0.34
LINC01888-201ENST00000415138 KRTAP3-2Q9BYR7 98 aa12.9□□□□□ -0.34
LINC01888-201ENST00000415138 NPHP3Q7Z494 1330 aa12.89□□□□□ -0.35
LINC01888-201ENST00000415138 USP32Q8NFA0 1604 aa12.89□□□□□ -0.35
LINC01888-201ENST00000415138 TAF7LQ5H9L4 462 aa12.89□□□□□ -0.35
LINC01888-201ENST00000415138 ATAD2Q6PL18 1390 aa12.89□□□□□ -0.35
LINC01888-201ENST00000415138 FOXO3O43524 673 aa12.88□□□□□ -0.35
LINC01888-201ENST00000415138 CCDC136Q96JN2 1154 aa12.88□□□□□ -0.35
LINC01888-201ENST00000415138 PUS7Q96PZ0 661 aaKnown RBP12.88□□□□□ -0.35
LINC01888-201ENST00000415138 PPIP5K1Q6PFW1 1433 aa12.88□□□□□ -0.35
LINC01888-201ENST00000415138 SLC34A2O95436 690 aa12.87□□□□□ -0.35
LINC01888-201ENST00000415138 FGD1P98174 961 aa12.87□□□□□ -0.35
LINC01888-201ENST00000415138 HOMEZQ8IX15 550 aa12.87□□□□□ -0.35
LINC01888-201ENST00000415138 TESK2Q96S53 571 aa12.87□□□□□ -0.35
LINC01888-201ENST00000415138 NHSL1Q5SYE7 1610 aa12.87□□□□□ -0.35
LINC01888-201ENST00000415138 HSPA1LP34931 641 aa12.86□□□□□ -0.35
LINC01888-201ENST00000415138 KRT28Q7Z3Y7 464 aa12.86□□□□□ -0.35
LINC01888-201ENST00000415138 LRRC59Q96AG4 307 aaKnown RBP12.86□□□□□ -0.35
LINC01888-201ENST00000415138 GPHNQ9NQX3 736 aaPredicted RBP12.86□□□□□ -0.35
LINC01888-201ENST00000415138 CABP1Q9NZU7 370 aa12.86□□□□□ -0.35
LINC01888-201ENST00000415138 TOPAZ1Q8N9V7 1692 aa12.86□□□□□ -0.35
LINC01888-201ENST00000415138 PRR36Q9H6K5 1346 aa12.86□□□□□ -0.35
LINC01888-201ENST00000415138 ATP7BP35670 1465 aa12.85□□□□□ -0.35
LINC01888-201ENST00000415138 DISP3Q9P2K9 1392 aa12.85□□□□□ -0.35
LINC01888-201ENST00000415138 ZNF316A6NFI3 1004 aaPredicted RBP12.85□□□□□ -0.35
LINC01888-201ENST00000415138 LMOD2Q6P5Q4 547 aa12.85□□□□□ -0.35
LINC01888-201ENST00000415138 HDGFL2Q7Z4V5 671 aaPredicted RBP12.85□□□□□ -0.35
LINC01888-201ENST00000415138 TERF2IPQ9NYB0 399 aa12.85□□□□□ -0.35
LINC01888-201ENST00000415138 PCDHGA4Q9Y5G9 962 aa12.85□□□□□ -0.35
LINC01888-201ENST00000415138 ACEP12821 1306 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms