RNA–Protein interactions for RNA: ENST00000413509.6

HDAC9-207, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-207ENST00000413509 KCNH5Q8NCM2 988 aa10.9□□□□□ -0.66
HDAC9-207ENST00000413509 PNNQ9H307 717 aaKnown RBP10.9□□□□□ -0.66
HDAC9-207ENST00000413509 NCAPD2Q15021 1401 aa10.9□□□□□ -0.66
HDAC9-207ENST00000413509 SPATA31A3Q5VYP0 1347 aa10.89□□□□□ -0.67
HDAC9-207ENST00000413509 U2SURPO15042 1029 aaKnown RBP10.89□□□□□ -0.67
HDAC9-207ENST00000413509 PPM1GO15355 546 aaPredicted RBP10.89□□□□□ -0.67
HDAC9-207ENST00000413509 HOXC9P31274 260 aa10.89□□□□□ -0.67
HDAC9-207ENST00000413509 HSP90AB2PQ58FF8 381 aa10.89□□□□□ -0.67
HDAC9-207ENST00000413509 GTF3C3Q9Y5Q9 886 aa10.89□□□□□ -0.67
HDAC9-207ENST00000413509 COL18A1P39060 1754 aa10.89□□□□□ -0.67
HDAC9-207ENST00000413509 IGSF1Q8N6C5 1336 aa10.88□□□□□ -0.67
HDAC9-207ENST00000413509 AHDC1Q5TGY3 1603 aaPredicted RBP10.88□□□□□ -0.67
HDAC9-207ENST00000413509 SENP3-EIF4A1A0A087X0R7 540 aa10.88□□□□□ -0.67
HDAC9-207ENST00000413509 XPCQ01831 940 aaPredicted RBP10.88□□□□□ -0.67
HDAC9-207ENST00000413509 NUTM2GQ5VZR2 741 aa10.88□□□□□ -0.67
HDAC9-207ENST00000413509 ARHGEF25Q86VW2 580 aa10.88□□□□□ -0.67
HDAC9-207ENST00000413509 WWC1Q8IX03 1113 aa10.88□□□□□ -0.67
HDAC9-207ENST00000413509 IP6K1Q92551 441 aa10.88□□□□□ -0.67
HDAC9-207ENST00000413509 CDCA7LQ96GN5 454 aa10.88□□□□□ -0.67
HDAC9-207ENST00000413509 ABCA3Q99758 1704 aa10.88□□□□□ -0.67
HDAC9-207ENST00000413509 LMO7Q8WWI1 1683 aa10.88□□□□□ -0.67
HDAC9-207ENST00000413509 GCP02774 474 aa10.87□□□□□ -0.67
HDAC9-207ENST00000413509 TMPOP42166 694 aaKnown RBP10.87□□□□□ -0.67
HDAC9-207ENST00000413509 GOLGA2Q08379 1002 aa10.87□□□□□ -0.67
HDAC9-207ENST00000413509 SLFN5Q08AF3 891 aa10.87□□□□□ -0.67
HDAC9-207ENST00000413509 DUSP27Q5VZP5 1158 aa10.87□□□□□ -0.67
HDAC9-207ENST00000413509 WDR63Q8IWG1 891 aa10.87□□□□□ -0.67
HDAC9-207ENST00000413509 DLG5Q8TDM6 1919 aa10.86□□□□□ -0.67
HDAC9-207ENST00000413509 PRKAR2BP31323 418 aa10.86□□□□□ -0.67
HDAC9-207ENST00000413509 AMPHP49418 695 aa10.86□□□□□ -0.67
HDAC9-207ENST00000413509 DDX17Q92841 729 aaKnown RBP10.86□□□□□ -0.67
HDAC9-207ENST00000413509 TRIM35Q9UPQ4 493 aa10.86□□□□□ -0.67
HDAC9-207ENST00000413509 SALL2Q9Y467 1007 aaPredicted RBP10.86□□□□□ -0.67
HDAC9-207ENST00000413509 CPDO75976 1380 aa10.86□□□□□ -0.67
HDAC9-207ENST00000413509 ROBO1Q9Y6N7 1651 aa10.85□□□□□ -0.67
HDAC9-207ENST00000413509 E9PSI1 815 aa10.85□□□□□ -0.67
HDAC9-207ENST00000413509 NFE2L2Q16236 605 aa10.85□□□□□ -0.67
HDAC9-207ENST00000413509 CERKQ8TCT0 537 aa10.85□□□□□ -0.67
HDAC9-207ENST00000413509 SPINK5Q9NQ38 1064 aaPredicted RBP10.85□□□□□ -0.67
HDAC9-207ENST00000413509 IL16Q14005 1332 aa10.84□□□□□ -0.67
HDAC9-207ENST00000413509 MAPK8IP3Q9UPT6 1336 aa10.84□□□□□ -0.67
HDAC9-207ENST00000413509 SOX12O15370 315 aa10.84□□□□□ -0.67
HDAC9-207ENST00000413509 AEBP1Q8IUX7 1158 aa10.84□□□□□ -0.67
HDAC9-207ENST00000413509 PHACTR3Q96KR7 559 aa10.84□□□□□ -0.67
HDAC9-207ENST00000413509 COL22A1Q8NFW1 1626 aaPredicted RBP10.84□□□□□ -0.67
HDAC9-207ENST00000413509 FAM208AQ9UK61 1670 aaKnown RBP10.83□□□□□ -0.68
HDAC9-207ENST00000413509 HMOX1P09601 288 aa10.83□□□□□ -0.68
HDAC9-207ENST00000413509 EYA1Q99502 592 aa10.83□□□□□ -0.68
HDAC9-207ENST00000413509 RRP7AQ9Y3A4 280 aaKnown RBP10.83□□□□□ -0.68
HDAC9-207ENST00000413509 SUPT16HQ9Y5B9 1047 aaKnown RBP10.83□□□□□ -0.68
HDAC9-207ENST00000413509 RGPD2P0DJD1 1756 aa10.82□□□□□ -0.68
HDAC9-207ENST00000413509 RGPD5Q99666 1765 aa10.82□□□□□ -0.68
HDAC9-207ENST00000413509 SULT6B1Q6IMI4 303 aa10.82□□□□□ -0.68
HDAC9-207ENST00000413509 LRRC37A3O60309 1634 aa10.81□□□□□ -0.68
HDAC9-207ENST00000413509 PLEKHG2Q9H7P9 1386 aa10.81□□□□□ -0.68
HDAC9-207ENST00000413509 RCAN3Q9UKA8 241 aa10.81□□□□□ -0.68
HDAC9-207ENST00000413509 RIPK4P57078 832 aa10.8□□□□□ -0.68
HDAC9-207ENST00000413509 ERICH6BQ5W0A0 696 aa10.8□□□□□ -0.68
HDAC9-207ENST00000413509 COL16A1Q07092 1604 aaPredicted RBP10.8□□□□□ -0.68
HDAC9-207ENST00000413509 NEFMP07197 916 aa10.79□□□□□ -0.68
HDAC9-207ENST00000413509 LMOD3Q0VAK6 560 aa10.79□□□□□ -0.68
HDAC9-207ENST00000413509 NEUROD2Q15784 382 aa10.79□□□□□ -0.68
HDAC9-207ENST00000413509 LMOD2Q6P5Q4 547 aa10.79□□□□□ -0.68
HDAC9-207ENST00000413509 ZNF853P0CG23 659 aa10.78□□□□□ -0.68
HDAC9-207ENST00000413509 NBPF6Q5VWK0 638 aa10.78□□□□□ -0.68
HDAC9-207ENST00000413509 NBPF4Q96M43 638 aa10.78□□□□□ -0.68
HDAC9-207ENST00000413509 MYH16Q9H6N6 1097 aa10.78□□□□□ -0.68
HDAC9-207ENST00000413509 AXIN2Q9Y2T1 843 aa10.78□□□□□ -0.68
HDAC9-207ENST00000413509 ERBB3P21860 1342 aa10.78□□□□□ -0.68
HDAC9-207ENST00000413509 KIAA0232Q92628 1395 aa10.77□□□□□ -0.68
HDAC9-207ENST00000413509 NEFLP07196 543 aa10.77□□□□□ -0.69
HDAC9-207ENST00000413509 CT47B1P0C2W7 299 aaPredicted RBP10.77□□□□□ -0.69
HDAC9-207ENST00000413509 RRP1P56182 461 aaKnown RBP10.77□□□□□ -0.69
HDAC9-207ENST00000413509 CALD1Q05682 793 aaKnown RBP10.77□□□□□ -0.69
HDAC9-207ENST00000413509 ANKRD24Q8TF21 1146 aa10.77□□□□□ -0.69
HDAC9-207ENST00000413509 FANCIQ9NVI1 1328 aa10.77□□□□□ -0.69
HDAC9-207ENST00000413509 CRB1P82279 1406 aa10.76□□□□□ -0.69
HDAC9-207ENST00000413509 ADAMTS7Q9UKP4 1686 aa10.76□□□□□ -0.69
HDAC9-207ENST00000413509 PHLPP1O60346 1717 aa10.76□□□□□ -0.69
HDAC9-207ENST00000413509 HTATSF1O43719 755 aaKnown RBP10.76□□□□□ -0.69
HDAC9-207ENST00000413509 FKBP8Q14318 412 aa10.76□□□□□ -0.69
HDAC9-207ENST00000413509 GAS2L2Q8NHY3 880 aa10.76□□□□□ -0.69
HDAC9-207ENST00000413509 CABLES1Q8TDN4 633 aa10.76□□□□□ -0.69
HDAC9-207ENST00000413509 ZC3H6P61129 1189 aaKnown RBP10.75□□□□□ -0.69
HDAC9-207ENST00000413509 MTHFSDQ2M296 383 aaKnown RBP10.75□□□□□ -0.69
HDAC9-207ENST00000413509 IFT57Q9NWB7 429 aa10.75□□□□□ -0.69
HDAC9-207ENST00000413509 PKD1L3Q7Z443 1732 aa10.75□□□□□ -0.69
HDAC9-207ENST00000413509 OVOS2A0A0G2JMS6 1433 aa10.75□□□□□ -0.69
HDAC9-207ENST00000413509 LRRC59Q96AG4 307 aaKnown RBP10.74□□□□□ -0.69
HDAC9-207ENST00000413509 LTV1Q96GA3 475 aaPredicted RBP10.74□□□□□ -0.69
HDAC9-207ENST00000413509 COL14A1Q05707 1796 aaKnown RBP10.74□□□□□ -0.69
HDAC9-207ENST00000413509 COL5A2P05997 1499 aaPredicted RBP10.74□□□□□ -0.69
HDAC9-207ENST00000413509 GNAI1P63096 354 aa10.73□□□□□ -0.69
HDAC9-207ENST00000413509 USHBP1Q8N6Y0 703 aa10.73□□□□□ -0.69
HDAC9-207ENST00000413509 CFAP44Q96MT7 982 aa10.73□□□□□ -0.69
HDAC9-207ENST00000413509 CEMIPQ8WUJ3 1361 aa10.73□□□□□ -0.69
HDAC9-207ENST00000413509 MAP3K5Q99683 1374 aa10.73□□□□□ -0.69
HDAC9-207ENST00000413509 FAM83GA6ND36 823 aa10.72□□□□□ -0.69
HDAC9-207ENST00000413509 TOM1O60784 492 aa10.72□□□□□ -0.69
HDAC9-207ENST00000413509 TSR2Q969E8 191 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms