RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 EDC4Q6P2E9 1401 aaKnown RBP18.8■□□□□ 0.6
TTC39A-208ENST00000413473 RRS1Q15050 365 aaKnown RBP18.8■□□□□ 0.6
TTC39A-208ENST00000413473 NUDT16Q96DE0 195 aaKnown RBP18.8■□□□□ 0.6
TTC39A-208ENST00000413473 CHMP4BQ9H444 224 aaKnown RBP18.8■□□□□ 0.6
TTC39A-208ENST00000413473 CHMP5Q9NZZ3 219 aa18.8■□□□□ 0.6
TTC39A-208ENST00000413473 MCM4P33991 863 aa18.79■□□□□ 0.6
TTC39A-208ENST00000413473 TWISTNBQ3B726 338 aaPredicted RBP18.79■□□□□ 0.6
TTC39A-208ENST00000413473 HSCBQ8IWL3 235 aa18.79■□□□□ 0.6
TTC39A-208ENST00000413473 GCC1Q96CN9 775 aa18.79■□□□□ 0.6
TTC39A-208ENST00000413473 COG3Q96JB2 828 aa18.79■□□□□ 0.6
TTC39A-208ENST00000413473 C8orf58Q8NAV2 365 aa18.78■□□□□ 0.6
TTC39A-208ENST00000413473 METP08581 1390 aa18.78■□□□□ 0.6
TTC39A-208ENST00000413473 RBM25P49756 843 aaKnown RBP18.78■□□□□ 0.6
TTC39A-208ENST00000413473 PIK3R4Q99570 1358 aa18.77■□□□□ 0.6
TTC39A-208ENST00000413473 FAM83GA6ND36 823 aa18.77■□□□□ 0.6
TTC39A-208ENST00000413473 PTCH1Q13635 1447 aa18.77■□□□□ 0.6
TTC39A-208ENST00000413473 BMP2KLQ5H9B9 411 aa18.77■□□□□ 0.6
TTC39A-208ENST00000413473 CFAP44Q96MT7 982 aa18.77■□□□□ 0.6
TTC39A-208ENST00000413473 SIRT2Q8IXJ6 389 aa18.77■□□□□ 0.59
TTC39A-208ENST00000413473 CCDC61Q9Y6R9 512 aa18.77■□□□□ 0.59
TTC39A-208ENST00000413473 SETD1AO15047 1707 aaKnown RBP18.76■□□□□ 0.59
TTC39A-208ENST00000413473 AATKQ6ZMQ8 1374 aa18.76■□□□□ 0.59
TTC39A-208ENST00000413473 RIMBP3CA6NJZ7 1639 aa18.76■□□□□ 0.59
TTC39A-208ENST00000413473 RIMBP3BA6NNM3 1639 aa18.76■□□□□ 0.59
TTC39A-208ENST00000413473 RIMBP3Q9UFD9 1639 aa18.76■□□□□ 0.59
TTC39A-208ENST00000413473 CDK12Q9NYV4 1490 aaPredicted RBP18.76■□□□□ 0.59
TTC39A-208ENST00000413473 ABCC4O15439 1325 aa18.76■□□□□ 0.59
TTC39A-208ENST00000413473 LMOD3Q0VAK6 560 aa18.75■□□□□ 0.59
TTC39A-208ENST00000413473 DCTN1Q14203 1278 aa18.75■□□□□ 0.59
TTC39A-208ENST00000413473 SPATA31D1Q6ZQQ2 1576 aa18.75■□□□□ 0.59
TTC39A-208ENST00000413473 AGLP35573 1532 aa18.74■□□□□ 0.59
TTC39A-208ENST00000413473 TSPOAP1O95153 1857 aa18.74■□□□□ 0.59
TTC39A-208ENST00000413473 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.73■□□□□ 0.59
TTC39A-208ENST00000413473 CPS1P31327 1500 aa18.73■□□□□ 0.59
TTC39A-208ENST00000413473 ANO8Q9HCE9 1232 aaPredicted RBP18.73■□□□□ 0.59
TTC39A-208ENST00000413473 ZNF692Q9BU19 519 aaPredicted RBP18.73■□□□□ 0.59
TTC39A-208ENST00000413473 API5Q9BZZ5 524 aaKnown RBP18.73■□□□□ 0.59
TTC39A-208ENST00000413473 L1TD1Q5T7N2 865 aaKnown RBP18.72■□□□□ 0.59
TTC39A-208ENST00000413473 SNX21Q969T3 373 aa18.72■□□□□ 0.59
TTC39A-208ENST00000413473 DLG5Q8TDM6 1919 aa18.71■□□□□ 0.59
TTC39A-208ENST00000413473 REREQ9P2R6 1566 aa18.71■□□□□ 0.59
TTC39A-208ENST00000413473 GZF1Q9H116 711 aaPredicted RBP18.71■□□□□ 0.59
TTC39A-208ENST00000413473 NRXN3Q9Y4C0 1643 aa18.7■□□□□ 0.58
TTC39A-208ENST00000413473 TBC1D9Q6ZT07 1266 aa18.7■□□□□ 0.58
TTC39A-208ENST00000413473 TRAK2O60296 914 aa18.69■□□□□ 0.58
TTC39A-208ENST00000413473 AEBP1Q8IUX7 1158 aa18.69■□□□□ 0.58
TTC39A-208ENST00000413473 ARXQ96QS3 562 aa18.69■□□□□ 0.58
TTC39A-208ENST00000413473 KIF2CQ99661 725 aa18.69■□□□□ 0.58
TTC39A-208ENST00000413473 PRR36Q9H6K5 1346 aa18.68■□□□□ 0.58
TTC39A-208ENST00000413473 DDIT3P35638 169 aa18.68■□□□□ 0.58
TTC39A-208ENST00000413473 SIRT1Q96EB6 747 aa18.68■□□□□ 0.58
TTC39A-208ENST00000413473 NCOA3Q9Y6Q9 1424 aa18.68■□□□□ 0.58
TTC39A-208ENST00000413473 SULT6B1Q6IMI4 303 aa18.68■□□□□ 0.58
TTC39A-208ENST00000413473 DIP2BQ9P265 1576 aa18.68■□□□□ 0.58
TTC39A-208ENST00000413473 HSP90AB1P08238 724 aaKnown RBP18.67■□□□□ 0.58
TTC39A-208ENST00000413473 ESF1Q9H501 851 aaKnown RBP18.67■□□□□ 0.58
TTC39A-208ENST00000413473 GOLGA6L3A6NEY3 463 aa18.66■□□□□ 0.58
TTC39A-208ENST00000413473 EIF4A2Q14240 407 aaKnown RBP18.66■□□□□ 0.58
TTC39A-208ENST00000413473 KRT24Q2M2I5 525 aa18.66■□□□□ 0.58
TTC39A-208ENST00000413473 HDGFP51858 240 aaKnown RBP18.66■□□□□ 0.58
TTC39A-208ENST00000413473 FAM43AQ8N2R8 423 aa18.66■□□□□ 0.58
TTC39A-208ENST00000413473 XRCC6P12956 609 aaKnown RBP eCLIP18.65■□□□□ 0.58
TTC39A-208ENST00000413473 MON2Q7Z3U7 1717 aa18.65■□□□□ 0.58
TTC39A-208ENST00000413473 FSD2A1L4K1 749 aa18.65■□□□□ 0.58
TTC39A-208ENST00000413473 CD2BP2O95400 341 aaKnown RBP18.65■□□□□ 0.58
TTC39A-208ENST00000413473 DCTPP1Q9H773 170 aa18.65■□□□□ 0.58
TTC39A-208ENST00000413473 RBM42Q9BTD8 480 aaKnown RBP18.64■□□□□ 0.57
TTC39A-208ENST00000413473 TECPR2O15040 1411 aa18.64■□□□□ 0.57
TTC39A-208ENST00000413473 INTS3Q68E01 1043 aaKnown RBP18.64■□□□□ 0.57
TTC39A-208ENST00000413473 MCM10Q7L590 875 aa18.64■□□□□ 0.57
TTC39A-208ENST00000413473 PLEKHM2Q8IWE5 1019 aa18.64■□□□□ 0.57
TTC39A-208ENST00000413473 NUTM2FA1L443 756 aa18.63■□□□□ 0.57
TTC39A-208ENST00000413473 DDX11L8A8MPP1 907 aa18.63■□□□□ 0.57
TTC39A-208ENST00000413473 CDC45O75419 566 aa18.63■□□□□ 0.57
TTC39A-208ENST00000413473 TNPO1Q92973 898 aaKnown RBP18.63■□□□□ 0.57
TTC39A-208ENST00000413473 TTC21BQ7Z4L5 1316 aa18.63■□□□□ 0.57
TTC39A-208ENST00000413473 KIF24Q5T7B8 1368 aa18.63■□□□□ 0.57
TTC39A-208ENST00000413473 CHL1O00533 1208 aa18.63■□□□□ 0.57
TTC39A-208ENST00000413473 GSPT1P15170 499 aaKnown RBP18.63■□□□□ 0.57
TTC39A-208ENST00000413473 C3P01024 1663 aa18.62■□□□□ 0.57
TTC39A-208ENST00000413473 FOXD4L1Q9NU39 408 aa18.62■□□□□ 0.57
TTC39A-208ENST00000413473 CIZ1Q9ULV3 898 aaPredicted RBP18.62■□□□□ 0.57
TTC39A-208ENST00000413473 ROBO2Q9HCK4 1378 aa18.62■□□□□ 0.57
TTC39A-208ENST00000413473 HSP90AA1P07900 732 aaKnown RBP18.61■□□□□ 0.57
TTC39A-208ENST00000413473 AKAP12Q02952 1782 aa18.61■□□□□ 0.57
TTC39A-208ENST00000413473 HSP90AB2PQ58FF8 381 aa18.61■□□□□ 0.57
TTC39A-208ENST00000413473 C16orf71Q8IYS4 520 aaPredicted RBP18.61■□□□□ 0.57
TTC39A-208ENST00000413473 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.61■□□□□ 0.57
TTC39A-208ENST00000413473 ACEP12821 1306 aa18.61■□□□□ 0.57
TTC39A-208ENST00000413473 KNDC1Q76NI1 1749 aa18.6■□□□□ 0.57
TTC39A-208ENST00000413473 K7ELQ4 463 aaPredicted RBP18.6■□□□□ 0.57
TTC39A-208ENST00000413473 HAP1P54257 671 aaPredicted RBP18.6■□□□□ 0.57
TTC39A-208ENST00000413473 ANKRD44Q8N8A2 993 aa18.6■□□□□ 0.57
TTC39A-208ENST00000413473 ITSN1Q15811 1721 aa18.6■□□□□ 0.57
TTC39A-208ENST00000413473 SOX12O15370 315 aa18.59■□□□□ 0.57
TTC39A-208ENST00000413473 RAB3GAP1Q15042 981 aa18.59■□□□□ 0.57
TTC39A-208ENST00000413473 PANK2Q9BZ23 570 aa18.58■□□□□ 0.57
TTC39A-208ENST00000413473 RPAP2Q8IXW5 612 aaPredicted RBP18.58■□□□□ 0.56
TTC39A-208ENST00000413473 TTC22Q5TAA0 569 aa18.58■□□□□ 0.56
TTC39A-208ENST00000413473 RGS12O14924 1447 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms