RNA–Protein interactions for RNA: ENST00000412866.2

VSIG4-202, Transcript of V-set and immunoglobulin domain containing 4, humanhuman

TSL 2 BASIC

Gene VSIG4, Length 1,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4-202ENST00000412866 PRKAR2BP31323 418 aa12.75□□□□□ -0.37
VSIG4-202ENST00000412866 NEUROD2Q15784 382 aa12.75□□□□□ -0.37
VSIG4-202ENST00000412866 HSP90AB2PQ58FF8 381 aa12.75□□□□□ -0.37
VSIG4-202ENST00000412866 HMOX1P09601 288 aa12.74□□□□□ -0.37
VSIG4-202ENST00000412866 TMPOP42166 694 aaKnown RBP12.74□□□□□ -0.37
VSIG4-202ENST00000412866 SLFN5Q08AF3 891 aa12.74□□□□□ -0.37
VSIG4-202ENST00000412866 DUSP27Q5VZP5 1158 aa12.74□□□□□ -0.37
VSIG4-202ENST00000412866 KCNH5Q8NCM2 988 aa12.74□□□□□ -0.37
VSIG4-202ENST00000412866 ARHGEF10O15013 1369 aa12.74□□□□□ -0.37
VSIG4-202ENST00000412866 USP19O94966 1318 aa12.73□□□□□ -0.37
VSIG4-202ENST00000412866 RCAN3Q9UKA8 241 aa12.73□□□□□ -0.37
VSIG4-202ENST00000412866 PXDNQ92626 1479 aa12.73□□□□□ -0.37
VSIG4-202ENST00000412866 PHRF1Q9P1Y6 1649 aaKnown RBP12.73□□□□□ -0.37
VSIG4-202ENST00000412866 LTN1O94822 1766 aa12.73□□□□□ -0.37
VSIG4-202ENST00000412866 RNF123Q5XPI4 1314 aa12.73□□□□□ -0.37
VSIG4-202ENST00000412866 HOXC9P31274 260 aa12.72□□□□□ -0.37
VSIG4-202ENST00000412866 LMOD2Q6P5Q4 547 aa12.72□□□□□ -0.37
VSIG4-202ENST00000412866 WDR63Q8IWG1 891 aa12.72□□□□□ -0.37
VSIG4-202ENST00000412866 TRMT2AQ8IZ69 625 aaKnown RBP12.72□□□□□ -0.37
VSIG4-202ENST00000412866 TNS3Q68CZ2 1445 aa12.72□□□□□ -0.37
VSIG4-202ENST00000412866 BRINP3Q76B58 766 aa12.72□□□□□ -0.37
VSIG4-202ENST00000412866 SPINK5Q9NQ38 1064 aaPredicted RBP12.72□□□□□ -0.37
VSIG4-202ENST00000412866 SLAIN2Q9P270 581 aa12.72□□□□□ -0.37
VSIG4-202ENST00000412866 NFE2L2Q16236 605 aa12.71□□□□□ -0.38
VSIG4-202ENST00000412866 DDX17Q92841 729 aaKnown RBP12.71□□□□□ -0.38
VSIG4-202ENST00000412866 GCP02774 474 aa12.7□□□□□ -0.38
VSIG4-202ENST00000412866 RIPK4P57078 832 aa12.7□□□□□ -0.38
VSIG4-202ENST00000412866 SULT6B1Q6IMI4 303 aa12.7□□□□□ -0.38
VSIG4-202ENST00000412866 AEBP1Q8IUX7 1158 aa12.7□□□□□ -0.38
VSIG4-202ENST00000412866 PHACTR3Q96KR7 559 aa12.7□□□□□ -0.38
VSIG4-202ENST00000412866 TRIM35Q9UPQ4 493 aa12.7□□□□□ -0.38
VSIG4-202ENST00000412866 MED1Q15648 1581 aaPredicted RBP12.69□□□□□ -0.38
VSIG4-202ENST00000412866 IGSF1Q8N6C5 1336 aa12.69□□□□□ -0.38
VSIG4-202ENST00000412866 IP6K1Q92551 441 aa12.69□□□□□ -0.38
VSIG4-202ENST00000412866 KDRP35968 1356 aa12.69□□□□□ -0.38
VSIG4-202ENST00000412866 RRP1P56182 461 aaKnown RBP12.68□□□□□ -0.38
VSIG4-202ENST00000412866 IRX6P78412 446 aaPredicted RBP12.68□□□□□ -0.38
VSIG4-202ENST00000412866 MYH16Q9H6N6 1097 aa12.68□□□□□ -0.38
VSIG4-202ENST00000412866 IL16Q14005 1332 aa12.68□□□□□ -0.38
VSIG4-202ENST00000412866 SPATA31A3Q5VYP0 1347 aa12.68□□□□□ -0.38
VSIG4-202ENST00000412866 LTBP4Q8N2S1 1624 aa12.68□□□□□ -0.38
VSIG4-202ENST00000412866 ERICH6BQ5W0A0 696 aa12.67□□□□□ -0.38
VSIG4-202ENST00000412866 ARHGEF25Q86VW2 580 aa12.67□□□□□ -0.38
VSIG4-202ENST00000412866 ZBTB7CA1YPR0 619 aa12.66□□□□□ -0.38
VSIG4-202ENST00000412866 LMOD3Q0VAK6 560 aa12.66□□□□□ -0.38
VSIG4-202ENST00000412866 EYA1Q99502 592 aa12.66□□□□□ -0.38
VSIG4-202ENST00000412866 SOS2Q07890 1332 aaPredicted RBP12.66□□□□□ -0.38
VSIG4-202ENST00000412866 CRYBG1Q9Y4K1 1723 aa12.66□□□□□ -0.38
VSIG4-202ENST00000412866 NHSL1Q5SYE7 1610 aa12.66□□□□□ -0.38
VSIG4-202ENST00000412866 PLEKHG5O94827 1062 aa12.65□□□□□ -0.38
VSIG4-202ENST00000412866 LTV1Q96GA3 475 aaPredicted RBP12.65□□□□□ -0.38
VSIG4-202ENST00000412866 CALD1Q05682 793 aaKnown RBP12.65□□□□□ -0.38
VSIG4-202ENST00000412866 ABCC6O95255 1503 aa12.64□□□□□ -0.39
VSIG4-202ENST00000412866 FANCIQ9NVI1 1328 aa12.63□□□□□ -0.39
VSIG4-202ENST00000412866 DLG5Q8TDM6 1919 aa12.62□□□□□ -0.39
VSIG4-202ENST00000412866 ZC3H6P61129 1189 aaKnown RBP12.61□□□□□ -0.39
VSIG4-202ENST00000412866 ANKRD24Q8TF21 1146 aa12.61□□□□□ -0.39
VSIG4-202ENST00000412866 CPDO75976 1380 aa12.61□□□□□ -0.39
VSIG4-202ENST00000412866 CAMTA1Q9Y6Y1 1673 aa12.61□□□□□ -0.39
VSIG4-202ENST00000412866 NCAPD2Q15021 1401 aa12.61□□□□□ -0.39
VSIG4-202ENST00000412866 GAS2L2Q8NHY3 880 aa12.6□□□□□ -0.39
VSIG4-202ENST00000412866 CABLES1Q8TDN4 633 aa12.6□□□□□ -0.39
VSIG4-202ENST00000412866 TSR2Q969E8 191 aaKnown RBP12.6□□□□□ -0.39
VSIG4-202ENST00000412866 IFT57Q9NWB7 429 aa12.6□□□□□ -0.39
VSIG4-202ENST00000412866 CT47B1P0C2W7 299 aaPredicted RBP12.59□□□□□ -0.39
VSIG4-202ENST00000412866 USHBP1Q8N6Y0 703 aa12.59□□□□□ -0.39
VSIG4-202ENST00000412866 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.59□□□□□ -0.39
VSIG4-202ENST00000412866 THUMPD2Q9BTF0 503 aaKnown RBP12.59□□□□□ -0.39
VSIG4-202ENST00000412866 ROBO1Q9Y6N7 1651 aa12.59□□□□□ -0.39
VSIG4-202ENST00000412866 ABCA3Q99758 1704 aa12.59□□□□□ -0.39
VSIG4-202ENST00000412866 COL18A1P39060 1754 aa12.59□□□□□ -0.39
VSIG4-202ENST00000412866 AHDC1Q5TGY3 1603 aaPredicted RBP12.59□□□□□ -0.39
VSIG4-202ENST00000412866 GNAI1P63096 354 aa12.59□□□□□ -0.39
VSIG4-202ENST00000412866 MTHFSDQ2M296 383 aaKnown RBP12.59□□□□□ -0.39
VSIG4-202ENST00000412866 NBPF6Q5VWK0 638 aa12.59□□□□□ -0.39
VSIG4-202ENST00000412866 NBPF4Q96M43 638 aa12.59□□□□□ -0.39
VSIG4-202ENST00000412866 PPP4R2Q9NY27 417 aa12.59□□□□□ -0.39
VSIG4-202ENST00000412866 AXIN2Q9Y2T1 843 aa12.59□□□□□ -0.39
VSIG4-202ENST00000412866 ERBB3P21860 1342 aa12.58□□□□□ -0.39
VSIG4-202ENST00000412866 KIAA0232Q92628 1395 aa12.58□□□□□ -0.39
VSIG4-202ENST00000412866 LMO7Q8WWI1 1683 aa12.58□□□□□ -0.4
VSIG4-202ENST00000412866 FAM83GA6ND36 823 aa12.58□□□□□ -0.4
VSIG4-202ENST00000412866 PLIN1O60240 522 aa12.58□□□□□ -0.4
VSIG4-202ENST00000412866 ILDR1Q86SU0 546 aaPredicted RBP12.58□□□□□ -0.4
VSIG4-202ENST00000412866 LRRC59Q96AG4 307 aaKnown RBP12.58□□□□□ -0.4
VSIG4-202ENST00000412866 RGPD2P0DJD1 1756 aa12.57□□□□□ -0.4
VSIG4-202ENST00000412866 ZNF853P0CG23 659 aa12.57□□□□□ -0.4
VSIG4-202ENST00000412866 EXOSC9Q06265 439 aaKnown RBP12.57□□□□□ -0.4
VSIG4-202ENST00000412866 LAS1LQ9Y4W2 734 aaKnown RBP12.57□□□□□ -0.4
VSIG4-202ENST00000412866 FAM208AQ9UK61 1670 aaKnown RBP12.57□□□□□ -0.4
VSIG4-202ENST00000412866 RGPD5Q99666 1765 aa12.57□□□□□ -0.4
VSIG4-202ENST00000412866 LRRC37A3O60309 1634 aa12.56□□□□□ -0.4
VSIG4-202ENST00000412866 MAP3K5Q99683 1374 aa12.56□□□□□ -0.4
VSIG4-202ENST00000412866 HTATSF1O43719 755 aaKnown RBP12.56□□□□□ -0.4
VSIG4-202ENST00000412866 BCAR3O75815 825 aa12.56□□□□□ -0.4
VSIG4-202ENST00000412866 RARSP54136 660 aaKnown RBP12.56□□□□□ -0.4
VSIG4-202ENST00000412866 DCTN1Q14203 1278 aa12.56□□□□□ -0.4
VSIG4-202ENST00000412866 RTF1Q92541 710 aaKnown RBP12.56□□□□□ -0.4
VSIG4-202ENST00000412866 CFAP44Q96MT7 982 aa12.56□□□□□ -0.4
VSIG4-202ENST00000412866 HAP1P54257 671 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms