RNA–Protein interactions for RNA: ENST00000412282.1

HMGN1P24-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 24, humanhuman

BASIC

Gene HMGN1P24, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P24-201ENST00000412282 MMRN1Q13201 1228 aa6.43□□□□□ -1.38
HMGN1P24-201ENST00000412282 ELOAQ14241 798 aaKnown RBP6.43□□□□□ -1.38
HMGN1P24-201ENST00000412282 LINC01559Q495D7 138 aa6.43□□□□□ -1.38
HMGN1P24-201ENST00000412282 USP17L2Q6R6M4 530 aa6.43□□□□□ -1.38
HMGN1P24-201ENST00000412282 USP17L1Q7RTZ2 530 aa6.43□□□□□ -1.38
HMGN1P24-201ENST00000412282 ZNF592Q92610 1267 aa6.43□□□□□ -1.38
HMGN1P24-201ENST00000412282 EMID1Q96A84 441 aaPredicted RBP6.43□□□□□ -1.38
HMGN1P24-201ENST00000412282 CCDC85AQ96PX6 553 aaPredicted RBP6.43□□□□□ -1.38
HMGN1P24-201ENST00000412282 USP17L5A8MUK1 530 aa6.42□□□□□ -1.38
HMGN1P24-201ENST00000412282 SKOR1P84550 965 aa6.42□□□□□ -1.38
HMGN1P24-201ENST00000412282 SLFNL1Q499Z3 407 aa6.42□□□□□ -1.38
HMGN1P24-201ENST00000412282 PPP1R18Q6NYC8 613 aa6.42□□□□□ -1.38
HMGN1P24-201ENST00000412282 TRMT44Q8IYL2 757 aaKnown RBP6.42□□□□□ -1.38
HMGN1P24-201ENST00000412282 DEPDC4Q8N2C3 294 aa6.42□□□□□ -1.38
HMGN1P24-201ENST00000412282 PLPP7Q8NBV4 271 aa6.42□□□□□ -1.38
HMGN1P24-201ENST00000412282 MKRN1Q9UHC7 482 aaKnown RBP6.42□□□□□ -1.38
HMGN1P24-201ENST00000412282 ZBTB7BO15156 539 aaPredicted RBP6.41□□□□□ -1.38
HMGN1P24-201ENST00000412282 DKK1O94907 266 aa6.41□□□□□ -1.38
HMGN1P24-201ENST00000412282 PDE4CQ08493 712 aa6.41□□□□□ -1.38
HMGN1P24-201ENST00000412282 MAP7D1Q3KQU3 841 aa6.41□□□□□ -1.38
HMGN1P24-201ENST00000412282 DZIP3Q86Y13 1208 aaKnown RBP6.41□□□□□ -1.38
HMGN1P24-201ENST00000412282 RNF135Q8IUD6 432 aa6.41□□□□□ -1.38
HMGN1P24-201ENST00000412282 CARD14Q9BXL6 1004 aa6.41□□□□□ -1.38
HMGN1P24-201ENST00000412282 USTQ9Y2C2 406 aa6.41□□□□□ -1.38
HMGN1P24-201ENST00000412282 MAGEB6P1A0A0J9YX57 407 aa6.4□□□□□ -1.38
HMGN1P24-201ENST00000412282 RPIAP49247 311 aa6.4□□□□□ -1.38
HMGN1P24-201ENST00000412282 FAM69CQ0P6D2 419 aa6.4□□□□□ -1.38
HMGN1P24-201ENST00000412282 TRIM32Q13049 653 aa6.4□□□□□ -1.38
HMGN1P24-201ENST00000412282 PTK7Q13308 1070 aa6.4□□□□□ -1.38
HMGN1P24-201ENST00000412282 NCOA4Q13772 614 aa6.4□□□□□ -1.38
HMGN1P24-201ENST00000412282 KCTD17Q8N5Z5 321 aa6.4□□□□□ -1.38
HMGN1P24-201ENST00000412282 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.4□□□□□ -1.38
HMGN1P24-201ENST00000412282 PODXL2Q9NZ53 605 aa6.4□□□□□ -1.38
HMGN1P24-201ENST00000412282 ZMIZ1Q9ULJ6 1067 aa6.4□□□□□ -1.38
HMGN1P24-201ENST00000412282 BICRAQ9NZM4 1560 aa6.4□□□□□ -1.39
HMGN1P24-201ENST00000412282 FAM196BA6NMK8 535 aa6.39□□□□□ -1.39
HMGN1P24-201ENST00000412282 CSB-PGBD3P0DP91 1061 aa6.39□□□□□ -1.39
HMGN1P24-201ENST00000412282 WNT7BP56706 349 aa6.39□□□□□ -1.39
HMGN1P24-201ENST00000412282 CRTC2Q53ET0 693 aaPredicted RBP6.39□□□□□ -1.39
HMGN1P24-201ENST00000412282 IFFO2Q5TF58 517 aa6.39□□□□□ -1.39
HMGN1P24-201ENST00000412282 LIAT1Q6ZQX7 453 aa6.39□□□□□ -1.39
HMGN1P24-201ENST00000412282 CDCA7Q9BWT1 371 aaPredicted RBP6.39□□□□□ -1.39
HMGN1P24-201ENST00000412282 VARSP26640 1264 aaKnown RBP6.38□□□□□ -1.39
HMGN1P24-201ENST00000412282 CLDN10P78369 228 aa6.38□□□□□ -1.39
HMGN1P24-201ENST00000412282 SLAIN2Q9P270 581 aa6.38□□□□□ -1.39
HMGN1P24-201ENST00000412282 ZBTB24O43167 697 aaPredicted RBP6.37□□□□□ -1.39
HMGN1P24-201ENST00000412282 SIAH2O43255 324 aa6.37□□□□□ -1.39
HMGN1P24-201ENST00000412282 BRD1O95696 1058 aa6.37□□□□□ -1.39
HMGN1P24-201ENST00000412282 GGCXP38435 758 aa6.37□□□□□ -1.39
HMGN1P24-201ENST00000412282 GRM5P41594 1212 aa6.37□□□□□ -1.39
HMGN1P24-201ENST00000412282 AGERQ15109 404 aa6.37□□□□□ -1.39
HMGN1P24-201ENST00000412282 TMEM164Q5U3C3 297 aa6.37□□□□□ -1.39
HMGN1P24-201ENST00000412282 STK32AQ8WU08 396 aa6.37□□□□□ -1.39
HMGN1P24-201ENST00000412282 CDK15Q96Q40 435 aa6.37□□□□□ -1.39
HMGN1P24-201ENST00000412282 PCDHGA11Q9Y5H2 935 aa6.37□□□□□ -1.39
HMGN1P24-201ENST00000412282 SCRIBQ14160 1630 aa6.36□□□□□ -1.39
HMGN1P24-201ENST00000412282 ZBTB7CA1YPR0 619 aa6.36□□□□□ -1.39
HMGN1P24-201ENST00000412282 ATP5J2-PTCD1G3V325 749 aa6.36□□□□□ -1.39
HMGN1P24-201ENST00000412282 CD2BP2O95400 341 aaKnown RBP6.36□□□□□ -1.39
HMGN1P24-201ENST00000412282 RASA1P20936 1047 aa6.36□□□□□ -1.39
HMGN1P24-201ENST00000412282 RC3H1Q5TC82 1133 aaKnown RBP6.36□□□□□ -1.39
HMGN1P24-201ENST00000412282 RNF20Q5VTR2 975 aa6.36□□□□□ -1.39
HMGN1P24-201ENST00000412282 PHLDB3Q6NSJ2 640 aa6.36□□□□□ -1.39
HMGN1P24-201ENST00000412282 CCDC125Q86Z20 511 aa6.36□□□□□ -1.39
HMGN1P24-201ENST00000412282 SEPT12Q8IYM1 358 aa6.36□□□□□ -1.39
HMGN1P24-201ENST00000412282 MPNDQ8N594 471 aa6.36□□□□□ -1.39
HMGN1P24-201ENST00000412282 CDV3Q9UKY7 258 aaKnown RBP6.36□□□□□ -1.39
HMGN1P24-201ENST00000412282 NOVA2Q9UNW9 492 aaKnown RBP6.36□□□□□ -1.39
HMGN1P24-201ENST00000412282 MAP4K5Q9Y4K4 846 aa6.36□□□□□ -1.39
HMGN1P24-201ENST00000412282 USP17L15C9J2P7 530 aa6.35□□□□□ -1.39
HMGN1P24-201ENST00000412282 USP17L10C9JJH3 530 aa6.35□□□□□ -1.39
HMGN1P24-201ENST00000412282 USP17L13C9JLJ4 530 aa6.35□□□□□ -1.39
HMGN1P24-201ENST00000412282 USP17L12C9JPN9 530 aa6.35□□□□□ -1.39
HMGN1P24-201ENST00000412282 USP17L11C9JVI0 530 aa6.35□□□□□ -1.39
HMGN1P24-201ENST00000412282 USP17L21D6R901 530 aa6.35□□□□□ -1.39
HMGN1P24-201ENST00000412282 USP17L18D6R9N7 530 aa6.35□□□□□ -1.39
HMGN1P24-201ENST00000412282 USP17L22D6RA61 530 aa6.35□□□□□ -1.39
HMGN1P24-201ENST00000412282 USP17L17D6RBQ6 530 aa6.35□□□□□ -1.39
HMGN1P24-201ENST00000412282 USP17L19D6RCP7 530 aa6.35□□□□□ -1.39
HMGN1P24-201ENST00000412282 USP17L20D6RJB6 530 aa6.35□□□□□ -1.39
HMGN1P24-201ENST00000412282 USP17L24Q0WX57 530 aa6.35□□□□□ -1.39
HMGN1P24-201ENST00000412282 EML3Q32P44 896 aa6.35□□□□□ -1.39
HMGN1P24-201ENST00000412282 AEBP1Q8IUX7 1158 aa6.35□□□□□ -1.39
HMGN1P24-201ENST00000412282 OGFOD1Q8N543 542 aa6.35□□□□□ -1.39
HMGN1P24-201ENST00000412282 KCTD15Q96SI1 283 aaPredicted RBP6.35□□□□□ -1.39
HMGN1P24-201ENST00000412282 ANKMY2Q8IV38 441 aa6.34□□□□□ -1.39
HMGN1P24-201ENST00000412282 LARGE2Q8N3Y3 721 aa6.34□□□□□ -1.39
HMGN1P24-201ENST00000412282 SLC10A4Q96EP9 437 aa6.34□□□□□ -1.39
HMGN1P24-201ENST00000412282 DOLKQ9UPQ8 538 aa6.34□□□□□ -1.39
HMGN1P24-201ENST00000412282 KIAA1024Q9UPX6 916 aa6.34□□□□□ -1.39
HMGN1P24-201ENST00000412282 NOD1Q9Y239 953 aa6.34□□□□□ -1.39
HMGN1P24-201ENST00000412282 DPYDQ12882 1025 aa6.33□□□□□ -1.4
HMGN1P24-201ENST00000412282 USP4Q13107 963 aa6.33□□□□□ -1.4
HMGN1P24-201ENST00000412282 NBPF20Q3BBV1 942 aa6.33□□□□□ -1.4
HMGN1P24-201ENST00000412282 LARP1Q6PKG0 1096 aaKnown RBP6.33□□□□□ -1.4
HMGN1P24-201ENST00000412282 SIX5Q8N196 739 aa6.33□□□□□ -1.4
HMGN1P24-201ENST00000412282 FAM200AQ8TCP9 573 aa6.33□□□□□ -1.4
HMGN1P24-201ENST00000412282 DNAAF2Q9NVR5 837 aaKnown RBP6.33□□□□□ -1.4
HMGN1P24-201ENST00000412282 ERVH48-1M5A8F1 160 aa6.32□□□□□ -1.4
HMGN1P24-201ENST00000412282 SSFA2P28290 1259 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms