RNA–Protein interactions for RNA: ENST00000411900.5

PKP4-203, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-203ENST00000411900 EN1Q05925 392 aaPredicted RBP14.16□□□□□ -0.14
PKP4-203ENST00000411900 TOM1L2Q6ZVM7 507 aa14.16□□□□□ -0.14
PKP4-203ENST00000411900 ARHGEF25Q86VW2 580 aa14.16□□□□□ -0.14
PKP4-203ENST00000411900 A0A1W2PP64 1363 aa14.16□□□□□ -0.14
PKP4-203ENST00000411900 USP54Q70EL1 1684 aa14.15□□□□□ -0.14
PKP4-203ENST00000411900 CSB-PGBD3P0DP91 1061 aa14.15□□□□□ -0.14
PKP4-203ENST00000411900 THRAP3Q9Y2W1 955 aaKnown RBP14.15□□□□□ -0.14
PKP4-203ENST00000411900 USP47Q96K76 1375 aa14.14□□□□□ -0.15
PKP4-203ENST00000411900 FAM196AQ6ZSG2 479 aa14.14□□□□□ -0.15
PKP4-203ENST00000411900 TERF2IPQ9NYB0 399 aa14.14□□□□□ -0.15
PKP4-203ENST00000411900 LRRC37A3O60309 1634 aa14.14□□□□□ -0.15
PKP4-203ENST00000411900 EDC4Q6P2E9 1401 aaKnown RBP14.14□□□□□ -0.15
PKP4-203ENST00000411900 WDR17Q8IZU2 1322 aa14.14□□□□□ -0.15
PKP4-203ENST00000411900 USP31Q70CQ4 1352 aa14.12□□□□□ -0.15
PKP4-203ENST00000411900 PSDA5PKW4 1024 aaPredicted RBP14.12□□□□□ -0.15
PKP4-203ENST00000411900 SRCAPQ6ZRS2 3230 aa14.11□□□□□ -0.15
PKP4-203ENST00000411900 EZH2Q15910 746 aaKnown RBP14.11□□□□□ -0.15
PKP4-203ENST00000411900 PUS7Q96PZ0 661 aaKnown RBP14.11□□□□□ -0.15
PKP4-203ENST00000411900 APBA3O96018 575 aa14.1□□□□□ -0.15
PKP4-203ENST00000411900 SBF2Q86WG5 1849 aa14.09□□□□□ -0.15
PKP4-203ENST00000411900 TMF1P82094 1093 aa14.09□□□□□ -0.15
PKP4-203ENST00000411900 DDB1Q16531 1140 aa14.09□□□□□ -0.15
PKP4-203ENST00000411900 PEAK1Q9H792 1746 aa14.09□□□□□ -0.15
PKP4-203ENST00000411900 NINLQ9Y2I6 1382 aa14.09□□□□□ -0.15
PKP4-203ENST00000411900 OVOS2A0A0J9YW53 1432 aa14.08□□□□□ -0.15
PKP4-203ENST00000411900 OVOS2Q6IE36 1432 aa14.08□□□□□ -0.15
PKP4-203ENST00000411900 CARD10Q9BWT7 1032 aa14.08□□□□□ -0.16
PKP4-203ENST00000411900 DISP2A7MBM2 1401 aa14.07□□□□□ -0.16
PKP4-203ENST00000411900 ABCC6O95255 1503 aa14.07□□□□□ -0.16
PKP4-203ENST00000411900 FBLN1P23142 703 aa14.07□□□□□ -0.16
PKP4-203ENST00000411900 ANKRD36BQ8N2N9 1353 aa14.07□□□□□ -0.16
PKP4-203ENST00000411900 OVOS2A0A0G2JMS6 1433 aa14.07□□□□□ -0.16
PKP4-203ENST00000411900 SLC24A1O60721 1099 aa14.06□□□□□ -0.16
PKP4-203ENST00000411900 CCER1Q8TC90 406 aaPredicted RBP14.06□□□□□ -0.16
PKP4-203ENST00000411900 ANKRD24Q8TF21 1146 aa14.06□□□□□ -0.16
PKP4-203ENST00000411900 LTV1Q96GA3 475 aaPredicted RBP14.06□□□□□ -0.16
PKP4-203ENST00000411900 CAMKK2Q96RR4 588 aa14.06□□□□□ -0.16
PKP4-203ENST00000411900 NLRP2Q9NX02 1062 aa14.06□□□□□ -0.16
PKP4-203ENST00000411900 RREB1Q92766 1687 aa14.06□□□□□ -0.16
PKP4-203ENST00000411900 ERBB3P21860 1342 aa14.06□□□□□ -0.16
PKP4-203ENST00000411900 CLSPNQ9HAW4 1339 aa14.06□□□□□ -0.16
PKP4-203ENST00000411900 MYOM1P52179 1685 aa14.05□□□□□ -0.16
PKP4-203ENST00000411900 NUP188Q5SRE5 1749 aa14.05□□□□□ -0.16
PKP4-203ENST00000411900 R3HDM1Q15032 1099 aaKnown RBP14.05□□□□□ -0.16
PKP4-203ENST00000411900 MARCH10Q8NA82 808 aaPredicted RBP14.05□□□□□ -0.16
PKP4-203ENST00000411900 COG3Q96JB2 828 aa14.05□□□□□ -0.16
PKP4-203ENST00000411900 KIF20BQ96Q89 1820 aa14.05□□□□□ -0.16
PKP4-203ENST00000411900 RGPD2P0DJD1 1756 aa14.04□□□□□ -0.16
PKP4-203ENST00000411900 PTF1AQ7RTS3 328 aa14.04□□□□□ -0.16
PKP4-203ENST00000411900 TIMELESSQ9UNS1 1208 aa14.04□□□□□ -0.16
PKP4-203ENST00000411900 CCDC7Q96M83 1385 aa14.04□□□□□ -0.16
PKP4-203ENST00000411900 EXOC5O00471 708 aa14.03□□□□□ -0.16
PKP4-203ENST00000411900 POLR3GLQ9BT43 218 aa14.03□□□□□ -0.16
PKP4-203ENST00000411900 CDCA7Q9BWT1 371 aaPredicted RBP14.03□□□□□ -0.16
PKP4-203ENST00000411900 GGNBP2Q9H3C7 697 aa14.03□□□□□ -0.16
PKP4-203ENST00000411900 MAP3K19Q56UN5 1328 aa14.02□□□□□ -0.17
PKP4-203ENST00000411900 TNS2Q63HR2 1409 aa14.01□□□□□ -0.17
PKP4-203ENST00000411900 FYB1O15117 783 aa14.01□□□□□ -0.17
PKP4-203ENST00000411900 AMPHP49418 695 aa14.01□□□□□ -0.17
PKP4-203ENST00000411900 RRS1Q15050 365 aaKnown RBP14.01□□□□□ -0.17
PKP4-203ENST00000411900 CDCA8Q53HL2 280 aa14.01□□□□□ -0.17
PKP4-203ENST00000411900 IP6K1Q92551 441 aa14.01□□□□□ -0.17
PKP4-203ENST00000411900 FAM208AQ9UK61 1670 aaKnown RBP14.01□□□□□ -0.17
PKP4-203ENST00000411900 KAT6BQ8WYB5 2073 aa14□□□□□ -0.17
PKP4-203ENST00000411900 PARD3Q8TEW0 1356 aa14□□□□□ -0.17
PKP4-203ENST00000411900 LRP5O75197 1615 aa14□□□□□ -0.17
PKP4-203ENST00000411900 C11orf95C9JLR9 678 aaPredicted RBP13.99□□□□□ -0.17
PKP4-203ENST00000411900 IL2RBP14784 551 aa13.99□□□□□ -0.17
PKP4-203ENST00000411900 HOXC9P31274 260 aa13.99□□□□□ -0.17
PKP4-203ENST00000411900 ACSBG1Q96GR2 724 aa13.98□□□□□ -0.17
PKP4-203ENST00000411900 CARD14Q9BXL6 1004 aa13.98□□□□□ -0.17
PKP4-203ENST00000411900 BCL11BQ9C0K0 894 aaPredicted RBP13.98□□□□□ -0.17
PKP4-203ENST00000411900 RGPD3A6NKT7 1758 aaPredicted RBP13.98□□□□□ -0.17
PKP4-203ENST00000411900 RGPD4Q7Z3J3 1758 aa13.98□□□□□ -0.17
PKP4-203ENST00000411900 NSD3Q9BZ95 1437 aa13.98□□□□□ -0.17
PKP4-203ENST00000411900 KCNQ2O43526 872 aa13.97□□□□□ -0.17
PKP4-203ENST00000411900 NHSQ6T4R5 1651 aa13.97□□□□□ -0.17
PKP4-203ENST00000411900 HSPA5P11021 654 aaKnown RBP13.96□□□□□ -0.17
PKP4-203ENST00000411900 NBPF14Q5TI25 921 aa13.96□□□□□ -0.17
PKP4-203ENST00000411900 DDX54Q8TDD1 881 aaKnown RBP13.95□□□□□ -0.18
PKP4-203ENST00000411900 BCL9O00512 1426 aa13.95□□□□□ -0.18
PKP4-203ENST00000411900 BTAF1O14981 1849 aa13.94□□□□□ -0.18
PKP4-203ENST00000411900 PLSCR1O15162 318 aa13.94□□□□□ -0.18
PKP4-203ENST00000411900 EIF4G2P78344 907 aaKnown RBP eCLIP13.94□□□□□ -0.18
PKP4-203ENST00000411900 USHBP1Q8N6Y0 703 aa13.94□□□□□ -0.18
PKP4-203ENST00000411900 RTL1A6NKG5 1358 aa13.94□□□□□ -0.18
PKP4-203ENST00000411900 SHANK3Q9BYB0 1731 aa13.93□□□□□ -0.18
PKP4-203ENST00000411900 MAP2P11137 1827 aaKnown RBP13.93□□□□□ -0.18
PKP4-203ENST00000411900 HSP90AB2PQ58FF8 381 aa13.93□□□□□ -0.18
PKP4-203ENST00000411900 PROM2Q8N271 834 aa13.93□□□□□ -0.18
PKP4-203ENST00000411900 ANO8Q9HCE9 1232 aaPredicted RBP13.93□□□□□ -0.18
PKP4-203ENST00000411900 MEGF6O75095 1541 aa13.92□□□□□ -0.18
PKP4-203ENST00000411900 NBPF6Q5VWK0 638 aa13.92□□□□□ -0.18
PKP4-203ENST00000411900 NBPF4Q96M43 638 aa13.92□□□□□ -0.18
PKP4-203ENST00000411900 EMILIN1Q9Y6C2 1016 aa13.92□□□□□ -0.18
PKP4-203ENST00000411900 DOT1LQ8TEK3 1739 aa13.92□□□□□ -0.18
PKP4-203ENST00000411900 SMG6Q86US8 1419 aaKnown RBP13.91□□□□□ -0.18
PKP4-203ENST00000411900 PPM1GO15355 546 aaPredicted RBP13.91□□□□□ -0.18
PKP4-203ENST00000411900 TXNRD1Q16881 649 aa13.91□□□□□ -0.18
PKP4-203ENST00000411900 ANKRD26Q9UPS8 1709 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms