RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 MORC1Q86VD1 984 aa9.91□□□□□ -0.82
CXCR4-202ENST00000409817 TMEM121BQ9BXQ6 578 aaPredicted RBP9.91□□□□□ -0.82
CXCR4-202ENST00000409817 FOXK1P85037 733 aa9.91□□□□□ -0.82
CXCR4-202ENST00000409817 ATMINO43313 823 aaPredicted RBP9.9□□□□□ -0.82
CXCR4-202ENST00000409817 ASTLQ6HA08 431 aaPredicted RBP9.9□□□□□ -0.82
CXCR4-202ENST00000409817 BARGINQ6ZT62 677 aa9.9□□□□□ -0.82
CXCR4-202ENST00000409817 HAX1O00165 279 aa9.89□□□□□ -0.83
CXCR4-202ENST00000409817 PDIA6Q15084 440 aa9.89□□□□□ -0.83
CXCR4-202ENST00000409817 KIF3CO14782 793 aa9.89□□□□□ -0.83
CXCR4-202ENST00000409817 HDGFL2Q7Z4V5 671 aaPredicted RBP9.89□□□□□ -0.83
CXCR4-202ENST00000409817 CFAP53Q96M91 514 aa9.89□□□□□ -0.83
CXCR4-202ENST00000409817 MINK1Q8N4C8 1332 aaPredicted RBP9.89□□□□□ -0.83
CXCR4-202ENST00000409817 A0A1W2PP64 1363 aa9.89□□□□□ -0.83
CXCR4-202ENST00000409817 PLEKHG1Q9ULL1 1385 aa9.89□□□□□ -0.83
CXCR4-202ENST00000409817 ATP7BP35670 1465 aa9.89□□□□□ -0.83
CXCR4-202ENST00000409817 CPS1P31327 1500 aa9.89□□□□□ -0.83
CXCR4-202ENST00000409817 SAFB2Q14151 953 aaKnown RBP eCLIP9.88□□□□□ -0.83
CXCR4-202ENST00000409817 CDK19Q9BWU1 502 aa9.88□□□□□ -0.83
CXCR4-202ENST00000409817 FER1L4A9Z1Z3 1794 aa9.88□□□□□ -0.83
CXCR4-202ENST00000409817 ANKRD26Q9UPS8 1709 aa9.88□□□□□ -0.83
CXCR4-202ENST00000409817 ZNF521Q96K83 1311 aa9.87□□□□□ -0.83
CXCR4-202ENST00000409817 RCAN3Q9UKA8 241 aa9.87□□□□□ -0.83
CXCR4-202ENST00000409817 C3P01024 1663 aa9.87□□□□□ -0.83
CXCR4-202ENST00000409817 SLIT1O75093 1534 aa9.87□□□□□ -0.83
CXCR4-202ENST00000409817 NEUROD2Q15784 382 aa9.87□□□□□ -0.83
CXCR4-202ENST00000409817 CD163L1Q9NR16 1453 aa9.86□□□□□ -0.83
CXCR4-202ENST00000409817 ARHGAP23Q9P227 1491 aa9.86□□□□□ -0.83
CXCR4-202ENST00000409817 METP08581 1390 aa9.86□□□□□ -0.83
CXCR4-202ENST00000409817 C2orf72A6NCS6 295 aa9.86□□□□□ -0.83
CXCR4-202ENST00000409817 CLCN6P51797 869 aa9.86□□□□□ -0.83
CXCR4-202ENST00000409817 OCEL1Q9H607 264 aa9.86□□□□□ -0.83
CXCR4-202ENST00000409817 IRX6P78412 446 aaPredicted RBP9.85□□□□□ -0.83
CXCR4-202ENST00000409817 TMC2Q8TDI7 906 aa9.85□□□□□ -0.83
CXCR4-202ENST00000409817 BOLA1Q9Y3E2 137 aa9.85□□□□□ -0.83
CXCR4-202ENST00000409817 EID1Q9Y6B2 187 aa9.85□□□□□ -0.83
CXCR4-202ENST00000409817 ADAMTS13Q76LX8 1427 aa9.85□□□□□ -0.83
CXCR4-202ENST00000409817 RRP1P56182 461 aaKnown RBP9.85□□□□□ -0.83
CXCR4-202ENST00000409817 IER5LQ5T953 404 aa9.85□□□□□ -0.83
CXCR4-202ENST00000409817 PLPP6Q8IY26 295 aa9.85□□□□□ -0.83
CXCR4-202ENST00000409817 SHPRHQ149N8 1683 aa9.84□□□□□ -0.83
CXCR4-202ENST00000409817 PLEKHH1Q9ULM0 1364 aa9.84□□□□□ -0.83
CXCR4-202ENST00000409817 DIP2AQ14689 1571 aa9.84□□□□□ -0.83
CXCR4-202ENST00000409817 WASLO00401 505 aaPredicted RBP9.84□□□□□ -0.83
CXCR4-202ENST00000409817 GPIHBP1Q8IV16 184 aa9.84□□□□□ -0.83
CXCR4-202ENST00000409817 THEMISQ8N1K5 641 aaPredicted RBP9.84□□□□□ -0.83
CXCR4-202ENST00000409817 SALL2Q9Y467 1007 aaPredicted RBP9.84□□□□□ -0.83
CXCR4-202ENST00000409817 ADGRB2O60241 1585 aa9.84□□□□□ -0.83
CXCR4-202ENST00000409817 SPDYE16A6NNV3 312 aaPredicted RBP9.83□□□□□ -0.84
CXCR4-202ENST00000409817 MTHFSP49914 203 aa9.83□□□□□ -0.84
CXCR4-202ENST00000409817 WAPLQ7Z5K2 1190 aa9.83□□□□□ -0.84
CXCR4-202ENST00000409817 KIF20BQ96Q89 1820 aa9.83□□□□□ -0.84
CXCR4-202ENST00000409817 FYB1O15117 783 aa9.83□□□□□ -0.84
CXCR4-202ENST00000409817 CPSF1Q10570 1443 aaKnown RBP9.83□□□□□ -0.84
CXCR4-202ENST00000409817 TMEM92Q6UXU6 159 aa9.83□□□□□ -0.84
CXCR4-202ENST00000409817 RUNDC1Q96C34 613 aa9.83□□□□□ -0.84
CXCR4-202ENST00000409817 CDCA7LQ96GN5 454 aa9.83□□□□□ -0.84
CXCR4-202ENST00000409817 CABP1Q9NZU7 370 aa9.83□□□□□ -0.84
CXCR4-202ENST00000409817 EDC4Q6P2E9 1401 aaKnown RBP9.82□□□□□ -0.84
CXCR4-202ENST00000409817 E9PSI1 815 aa9.82□□□□□ -0.84
CXCR4-202ENST00000409817 APAF1O14727 1248 aa9.82□□□□□ -0.84
CXCR4-202ENST00000409817 GPR37O15354 613 aa9.82□□□□□ -0.84
CXCR4-202ENST00000409817 TXNDC2Q86VQ3 553 aa9.82□□□□□ -0.84
CXCR4-202ENST00000409817 TRMT2AQ8IZ69 625 aaKnown RBP9.82□□□□□ -0.84
CXCR4-202ENST00000409817 TBX22Q9Y458 520 aa9.82□□□□□ -0.84
CXCR4-202ENST00000409817 CDC42BPGQ6DT37 1551 aa9.81□□□□□ -0.84
CXCR4-202ENST00000409817 SLFN5Q08AF3 891 aa9.81□□□□□ -0.84
CXCR4-202ENST00000409817 DUSP27Q5VZP5 1158 aa9.81□□□□□ -0.84
CXCR4-202ENST00000409817 LTKP29376 864 aa9.81□□□□□ -0.84
CXCR4-202ENST00000409817 CCDC27Q2M243 656 aa9.81□□□□□ -0.84
CXCR4-202ENST00000409817 PTCH1Q13635 1447 aa9.8□□□□□ -0.84
CXCR4-202ENST00000409817 PPIP5K1Q6PFW1 1433 aa9.8□□□□□ -0.84
CXCR4-202ENST00000409817 SENP3-EIF4A1A0A087X0R7 540 aa9.8□□□□□ -0.84
CXCR4-202ENST00000409817 TNNT2P45379 298 aaPredicted RBP9.8□□□□□ -0.84
CXCR4-202ENST00000409817 CEBPAP49715 358 aaPredicted RBP9.8□□□□□ -0.84
CXCR4-202ENST00000409817 PNNQ9H307 717 aaKnown RBP9.8□□□□□ -0.84
CXCR4-202ENST00000409817 PNPLA6Q8IY17 1366 aa9.8□□□□□ -0.84
CXCR4-202ENST00000409817 PIK3R4Q99570 1358 aa9.8□□□□□ -0.84
CXCR4-202ENST00000409817 IQSEC2Q5JU85 1478 aa9.8□□□□□ -0.84
CXCR4-202ENST00000409817 NKTRP30414 1462 aaKnown RBP9.79□□□□□ -0.84
CXCR4-202ENST00000409817 ROBO2Q9HCK4 1378 aa9.79□□□□□ -0.84
CXCR4-202ENST00000409817 CCDC146Q8IYE0 955 aa9.79□□□□□ -0.84
CXCR4-202ENST00000409817 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.79□□□□□ -0.84
CXCR4-202ENST00000409817 NUDT16Q96DE0 195 aaKnown RBP9.79□□□□□ -0.84
CXCR4-202ENST00000409817 GGNBP2Q9H3C7 697 aa9.79□□□□□ -0.84
CXCR4-202ENST00000409817 COL3A1P02461 1466 aaPredicted RBP9.79□□□□□ -0.84
CXCR4-202ENST00000409817 MON2Q7Z3U7 1717 aa9.79□□□□□ -0.84
CXCR4-202ENST00000409817 WDR63Q8IWG1 891 aa9.79□□□□□ -0.84
CXCR4-202ENST00000409817 CEP170BQ9Y4F5 1589 aaPredicted RBP9.78□□□□□ -0.84
CXCR4-202ENST00000409817 CCDC136Q96JN2 1154 aa9.78□□□□□ -0.84
CXCR4-202ENST00000409817 AK7Q96M32 723 aa9.78□□□□□ -0.84
CXCR4-202ENST00000409817 COLQQ9Y215 455 aaPredicted RBP9.78□□□□□ -0.84
CXCR4-202ENST00000409817 AKAP12Q02952 1782 aa9.77□□□□□ -0.84
CXCR4-202ENST00000409817 AATKQ6ZMQ8 1374 aa9.77□□□□□ -0.84
CXCR4-202ENST00000409817 B4GALNT3Q6L9W6 998 aa9.77□□□□□ -0.85
CXCR4-202ENST00000409817 WWC1Q8IX03 1113 aa9.77□□□□□ -0.85
CXCR4-202ENST00000409817 ITSN1Q15811 1721 aa9.77□□□□□ -0.85
CXCR4-202ENST00000409817 TCP11L2Q8N4U5 519 aa9.76□□□□□ -0.85
CXCR4-202ENST00000409817 GPBP1L1Q9HC44 474 aaPredicted RBP9.76□□□□□ -0.85
CXCR4-202ENST00000409817 TOPAZ1Q8N9V7 1692 aa9.76□□□□□ -0.85
CXCR4-202ENST00000409817 PLEKHG3A1L390 1219 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms