RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 PTCH1Q13635 1447 aa19.04■□□□□ 0.64
LYSMD4-204ENST00000409796 C1orf115Q9H7X2 142 aa19.04■□□□□ 0.64
LYSMD4-204ENST00000409796 DLG5Q8TDM6 1919 aa19.03■□□□□ 0.64
LYSMD4-204ENST00000409796 IL13P35225 146 aa19.03■□□□□ 0.64
LYSMD4-204ENST00000409796 RBM25P49756 843 aaKnown RBP19.03■□□□□ 0.64
LYSMD4-204ENST00000409796 A2ML1A8K2U0 1454 aa19.03■□□□□ 0.64
LYSMD4-204ENST00000409796 ZRANB1Q9UGI0 708 aa19.03■□□□□ 0.64
LYSMD4-204ENST00000409796 PIK3R4Q99570 1358 aa19.03■□□□□ 0.64
LYSMD4-204ENST00000409796 ELL2O00472 640 aaPredicted RBP19.02■□□□□ 0.64
LYSMD4-204ENST00000409796 GNAI1P63096 354 aa19.02■□□□□ 0.64
LYSMD4-204ENST00000409796 L1TD1Q5T7N2 865 aaKnown RBP19.02■□□□□ 0.64
LYSMD4-204ENST00000409796 NME9Q86XW9 330 aa19.02■□□□□ 0.64
LYSMD4-204ENST00000409796 ARHGAP45Q92619 1136 aa19.02■□□□□ 0.64
LYSMD4-204ENST00000409796 CALD1Q05682 793 aaKnown RBP19.02■□□□□ 0.63
LYSMD4-204ENST00000409796 ANKRD45Q5TZF3 282 aa19.02■□□□□ 0.63
LYSMD4-204ENST00000409796 MBIPQ9NS73 344 aa19.02■□□□□ 0.63
LYSMD4-204ENST00000409796 IFT57Q9NWB7 429 aa19.02■□□□□ 0.63
LYSMD4-204ENST00000409796 RIMS2Q9UQ26 1411 aa19.02■□□□□ 0.63
LYSMD4-204ENST00000409796 ZNF692Q9BU19 519 aaPredicted RBP19.01■□□□□ 0.63
LYSMD4-204ENST00000409796 ZNF853P0CG23 659 aa19.01■□□□□ 0.63
LYSMD4-204ENST00000409796 BMP2KLQ5H9B9 411 aa19.01■□□□□ 0.63
LYSMD4-204ENST00000409796 CPSF1Q10570 1443 aaKnown RBP19.01■□□□□ 0.63
LYSMD4-204ENST00000409796 EDC4Q6P2E9 1401 aaKnown RBP19.01■□□□□ 0.63
LYSMD4-204ENST00000409796 GCC1Q96CN9 775 aa19■□□□□ 0.63
LYSMD4-204ENST00000409796 CDK12Q9NYV4 1490 aaPredicted RBP19■□□□□ 0.63
LYSMD4-204ENST00000409796 NCOA3Q9Y6Q9 1424 aa18.99■□□□□ 0.63
LYSMD4-204ENST00000409796 CHMP4BQ9H444 224 aaKnown RBP18.99■□□□□ 0.63
LYSMD4-204ENST00000409796 ABCC4O15439 1325 aa18.99■□□□□ 0.63
LYSMD4-204ENST00000409796 WASLO00401 505 aaPredicted RBP18.98■□□□□ 0.63
LYSMD4-204ENST00000409796 SIRT2Q8IXJ6 389 aa18.98■□□□□ 0.63
LYSMD4-204ENST00000409796 TWISTNBQ3B726 338 aaPredicted RBP18.98■□□□□ 0.63
LYSMD4-204ENST00000409796 SNX21Q969T3 373 aa18.98■□□□□ 0.63
LYSMD4-204ENST00000409796 GZF1Q9H116 711 aaPredicted RBP18.97■□□□□ 0.63
LYSMD4-204ENST00000409796 C8orf58Q8NAV2 365 aa18.97■□□□□ 0.63
LYSMD4-204ENST00000409796 SPATA31D1Q6ZQQ2 1576 aa18.97■□□□□ 0.63
LYSMD4-204ENST00000409796 DDIT3P35638 169 aa18.97■□□□□ 0.63
LYSMD4-204ENST00000409796 ARXQ96QS3 562 aa18.97■□□□□ 0.63
LYSMD4-204ENST00000409796 CPS1P31327 1500 aa18.96■□□□□ 0.63
LYSMD4-204ENST00000409796 NRXN3Q9Y4C0 1643 aa18.96■□□□□ 0.63
LYSMD4-204ENST00000409796 TRAK2O60296 914 aa18.96■□□□□ 0.63
LYSMD4-204ENST00000409796 AATKQ6ZMQ8 1374 aa18.96■□□□□ 0.63
LYSMD4-204ENST00000409796 NCKAP5LQ9HCH0 1330 aa18.96■□□□□ 0.63
LYSMD4-204ENST00000409796 RRS1Q15050 365 aaKnown RBP18.96■□□□□ 0.63
LYSMD4-204ENST00000409796 CFAP44Q96MT7 982 aa18.96■□□□□ 0.63
LYSMD4-204ENST00000409796 FSD2A1L4K1 749 aa18.95■□□□□ 0.62
LYSMD4-204ENST00000409796 FAM83GA6ND36 823 aa18.95■□□□□ 0.62
LYSMD4-204ENST00000409796 KIF2CQ99661 725 aa18.95■□□□□ 0.62
LYSMD4-204ENST00000409796 GOLGA6L3A6NEY3 463 aa18.95■□□□□ 0.62
LYSMD4-204ENST00000409796 MON2Q7Z3U7 1717 aa18.94■□□□□ 0.62
LYSMD4-204ENST00000409796 COG3Q96JB2 828 aa18.94■□□□□ 0.62
LYSMD4-204ENST00000409796 METP08581 1390 aa18.94■□□□□ 0.62
LYSMD4-204ENST00000409796 XRCC6P12956 609 aaKnown RBP eCLIP18.94■□□□□ 0.62
LYSMD4-204ENST00000409796 LMOD3Q0VAK6 560 aa18.94■□□□□ 0.62
LYSMD4-204ENST00000409796 TBC1D9Q6ZT07 1266 aa18.94■□□□□ 0.62
LYSMD4-204ENST00000409796 NUDT16Q96DE0 195 aaKnown RBP18.94■□□□□ 0.62
LYSMD4-204ENST00000409796 AGLP35573 1532 aa18.94■□□□□ 0.62
LYSMD4-204ENST00000409796 DCTN1Q14203 1278 aa18.93■□□□□ 0.62
LYSMD4-204ENST00000409796 TXNDC2Q86VQ3 553 aa18.93■□□□□ 0.62
LYSMD4-204ENST00000409796 REREQ9P2R6 1566 aa18.93■□□□□ 0.62
LYSMD4-204ENST00000409796 PKNOX2Q96KN3 472 aa18.93■□□□□ 0.62
LYSMD4-204ENST00000409796 API5Q9BZZ5 524 aaKnown RBP18.93■□□□□ 0.62
LYSMD4-204ENST00000409796 RRAGDQ9NQL2 400 aaPredicted RBP18.93■□□□□ 0.62
LYSMD4-204ENST00000409796 PPP6R1Q9UPN7 881 aa18.93■□□□□ 0.62
LYSMD4-204ENST00000409796 KNDC1Q76NI1 1749 aa18.93■□□□□ 0.62
LYSMD4-204ENST00000409796 HSP90AB1P08238 724 aaKnown RBP18.92■□□□□ 0.62
LYSMD4-204ENST00000409796 AKAP12Q02952 1782 aa18.91■□□□□ 0.62
LYSMD4-204ENST00000409796 DDX11L8A8MPP1 907 aa18.91■□□□□ 0.62
LYSMD4-204ENST00000409796 MLECQ14165 292 aa18.91■□□□□ 0.62
LYSMD4-204ENST00000409796 CD2BP2O95400 341 aaKnown RBP18.9■□□□□ 0.62
LYSMD4-204ENST00000409796 C3P01024 1663 aa18.9■□□□□ 0.62
LYSMD4-204ENST00000409796 ITSN1Q15811 1721 aa18.9■□□□□ 0.62
LYSMD4-204ENST00000409796 TNPO1Q92973 898 aaKnown RBP18.89■□□□□ 0.62
LYSMD4-204ENST00000409796 CCDC61Q9Y6R9 512 aa18.89■□□□□ 0.62
LYSMD4-204ENST00000409796 PANK2Q9BZ23 570 aa18.88■□□□□ 0.61
LYSMD4-204ENST00000409796 CIZ1Q9ULV3 898 aaPredicted RBP18.88■□□□□ 0.61
LYSMD4-204ENST00000409796 RBM42Q9BTD8 480 aaKnown RBP18.88■□□□□ 0.61
LYSMD4-204ENST00000409796 CDC45O75419 566 aa18.87■□□□□ 0.61
LYSMD4-204ENST00000409796 KIF24Q5T7B8 1368 aa18.87■□□□□ 0.61
LYSMD4-204ENST00000409796 GSPT1P15170 499 aaKnown RBP18.87■□□□□ 0.61
LYSMD4-204ENST00000409796 AEBP1Q8IUX7 1158 aa18.87■□□□□ 0.61
LYSMD4-204ENST00000409796 FOXD4L1Q9NU39 408 aa18.87■□□□□ 0.61
LYSMD4-204ENST00000409796 RAB3GAP1Q15042 981 aa18.86■□□□□ 0.61
LYSMD4-204ENST00000409796 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.86■□□□□ 0.61
LYSMD4-204ENST00000409796 NRKQ7Z2Y5 1582 aa18.86■□□□□ 0.61
LYSMD4-204ENST00000409796 PLEKHM2Q8IWE5 1019 aa18.86■□□□□ 0.61
LYSMD4-204ENST00000409796 PRR36Q9H6K5 1346 aa18.86■□□□□ 0.61
LYSMD4-204ENST00000409796 K7ELQ4 463 aaPredicted RBP18.85■□□□□ 0.61
LYSMD4-204ENST00000409796 KRT24Q2M2I5 525 aa18.85■□□□□ 0.61
LYSMD4-204ENST00000409796 DCTPP1Q9H773 170 aa18.85■□□□□ 0.61
LYSMD4-204ENST00000409796 EIF4A2Q14240 407 aaKnown RBP18.84■□□□□ 0.61
LYSMD4-204ENST00000409796 INTS3Q68E01 1043 aaKnown RBP18.84■□□□□ 0.61
LYSMD4-204ENST00000409796 SULT6B1Q6IMI4 303 aa18.84■□□□□ 0.61
LYSMD4-204ENST00000409796 HSP90AA1P07900 732 aaKnown RBP18.84■□□□□ 0.61
LYSMD4-204ENST00000409796 TECPR2O15040 1411 aa18.83■□□□□ 0.61
LYSMD4-204ENST00000409796 RGS12O14924 1447 aa18.83■□□□□ 0.6
LYSMD4-204ENST00000409796 SIRT1Q96EB6 747 aa18.83■□□□□ 0.6
LYSMD4-204ENST00000409796 GBP4Q96PP9 640 aa18.83■□□□□ 0.6
LYSMD4-204ENST00000409796 MRE11P49959 708 aa18.82■□□□□ 0.6
LYSMD4-204ENST00000409796 C16orf71Q8IYS4 520 aaPredicted RBP18.82■□□□□ 0.6
LYSMD4-204ENST00000409796 ATP10DQ9P241 1426 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms